mRNA_P-wetherbeei_contig19969.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: UPI0019C2C350 (L-rhamnose mutarotase n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019C2C350) HSP 1 Score: 146 bits (368), Expect = 3.600e-43 Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 1
Query: 22 GPLPAAESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADILVQDGDGPLRMPLERVF 336
GPLP +ES AFCLR+R G E EY+RRHDE+WP+MR + DAGLLHYEI+L + LLF F+VRR DH+M NPVW+RWQ +MADIL+QD PLR+PL R+F
Sbjct: 9 GPLPGSESLAFCLRLRAGHEAEYQRRHDELWPDMRRALLDAGLLHYEIYLEPQSLLLFIFMVRRSDHSMGDLPQNPVWQRWQHHMADILMQDNGLPLRVPLRRMF 113
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: A0A4R6RJN0_9HYPH (L-rhamnose mutarotase n=2 Tax=Oharaeibacter diazotrophicus TaxID=1920512 RepID=A0A4R6RJN0_9HYPH) HSP 1 Score: 112 bits (280), Expect = 6.470e-30 Identity = 56/108 (51.85%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 25 PLPAA-ESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADIL-VQDGDGPLRMPLERVFRL 342
P PA E AF +R+ PG E EY+RRHDEIWPE+ A++++AG+ Y IHL RE LLF + RRRDH M + A+PV RRW A+MADI+ + D P+ +PL VF +
Sbjct: 2 PDPATHEKYAFRMRLHPGMEAEYRRRHDEIWPELAALLREAGVEDYSIHLDRETDLLFGVLWRRRDHGMAALPAHPVMRRWWAHMADIMETKPDDEPVAVPLVTVFHM 109
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: A0A5P8Z288_9RHOB (L-rhamnose mutarotase n=1 Tax=Roseivivax sp. THAF197b TaxID=2588299 RepID=A0A5P8Z288_9RHOB) HSP 1 Score: 111 bits (278), Expect = 1.090e-29 Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query: 40 ESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADILVQDGDG-PLRMPLERVF 336
E AF +++ PGCE EY+RRHDEIWPE+ A++ D G+ Y IHL E GLLF + RR DH MD+ +PV RRW A+MADI+ D P+ PL+ VF
Sbjct: 2 EKYAFKMQLNPGCEAEYRRRHDEIWPELVALLHDTGVSDYSIHLDAETGLLFGVLWRRDDHGMDALPDHPVMRRWWAHMADIMATHSDNAPVATPLKTVF 101
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: A0A2S3UJG2_9HYPH (L-rhamnose mutarotase n=1 Tax=Roseibium marinum TaxID=281252 RepID=A0A2S3UJG2_9HYPH) HSP 1 Score: 111 bits (277), Expect = 1.550e-29 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 1
Query: 40 ESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADILVQDGDG-PLRMPLERVFRL 342
E AF +++ PG E EYKRRHDEIWPE+ A+++DAG+ Y IHL RE +LFA + R+ H MD ++P+ RRW A+MAD++V D P+ PLE VF +
Sbjct: 2 EKVAFRMQLHPGMEAEYKRRHDEIWPELVALLKDAGISDYSIHLDRETNILFAVLWRQDGHTMDDLSSHPIMRRWWAHMADLMVVKPDNEPVAAPLETVFHM 103
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: A0A7X3S725_9HYPH (L-rhamnose mutarotase n=1 Tax=Stappia sp. GBMRC 2046 TaxID=2692190 RepID=A0A7X3S725_9HYPH) HSP 1 Score: 111 bits (277), Expect = 1.550e-29 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 1
Query: 40 ESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADILVQDGDG-PLRMPLERVFRL 342
E AF +++RPGCEDEY++RHDEIWPE+ ++++AG+ Y IHL RE G LFA + R H MD +PV RRW +MADI+ DG P+ +PLE +F +
Sbjct: 2 EKYAFKMKLRPGCEDEYRKRHDEIWPELVTLLKEAGISDYSIHLDRETGTLFAVLWRWDGHTMDRLPLDPVMRRWWDHMADIMETKPDGEPVAIPLETMFHM 103
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: UPI001BCC77B6 (L-rhamnose mutarotase n=1 Tax=Ancylobacter oerskovii TaxID=459519 RepID=UPI001BCC77B6) HSP 1 Score: 111 bits (277), Expect = 1.550e-29 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 40 ESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADILVQDGDG-PLRMPLERVFRL 342
E AF +++ PG +EY+RRHD +WPE+RA+++DAG+ Y IHL RE GLLFA + R DH MD+ +PV RRW ++MADI+ D P+ +PLE VF L
Sbjct: 2 EKIAFKMKLLPGQAEEYRRRHDALWPELRALLKDAGIRDYSIHLDRETGLLFATLWRSADHGMDALPEHPVMRRWWSHMADIMETRPDSSPVSVPLETVFHL 103
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: UPI001921CA87 (L-rhamnose mutarotase n=1 Tax=Microvirga aerilata TaxID=670292 RepID=UPI001921CA87) HSP 1 Score: 111 bits (277), Expect = 1.690e-29 Identity = 52/106 (49.06%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 28 LPAAESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADILVQDGDG-PLRMPLERVFRL 342
+ A E AF +++ PG E+EY+RRHDEIWPE+ A+++DAG+ Y IHL RE G+LFA + R DHAM + +PV +RW A+MADI+ + D P+ PL VF +
Sbjct: 1 MSAREKYAFTMQLNPGMEEEYRRRHDEIWPELVALLKDAGVEDYSIHLDRETGVLFAVLWRPADHAMANLPDHPVMKRWWAHMADIMATNPDNSPVEKPLATVFHM 106
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: A0A1N6FW40_9RHOB (L-rhamnose mutarotase n=1 Tax=Vannielia litorea TaxID=1217970 RepID=A0A1N6FW40_9RHOB) HSP 1 Score: 110 bits (276), Expect = 2.270e-29 Identity = 50/103 (48.54%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 37 AESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADIL-VQDGDGPLRMPLERVFRL 342
+E AF +++ PGCE EY+RRHDEIWPE+ +++ AG+ Y IHL RE G+LF + R DH M++ A+PV +RW A+MADI+ + + P+ +PLE VF L
Sbjct: 2 SEKYAFRMQLNPGCEAEYRRRHDEIWPELVTLLKQAGISDYSIHLDRESGVLFGVLWREDDHGMEALPAHPVMQRWWAHMADIMETRPDNAPVAVPLECVFHL 104
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: A0A2T7H957_9HYPH (L-rhamnose mutarotase n=1 Tax=Labrenzia sp. 011 TaxID=2171494 RepID=A0A2T7H957_9HYPH) HSP 1 Score: 110 bits (275), Expect = 3.130e-29 Identity = 51/102 (50.00%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 40 ESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADILV-QDGDGPLRMPLERVFRL 342
E AF + + PG E EY++RH+EIWPE+ ++++AG+ Y IHL RE +LFA + RR H MD A+PV RRW A+MAD++V Q G+ P+ +PLE VF L
Sbjct: 2 EKIAFKMMLHPGMEAEYRKRHEEIWPELTGLLKEAGISDYSIHLDRETHILFAVLWRRDGHGMDDLPAHPVMRRWWAHMADLMVTQPGNEPVTVPLETVFHL 103
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Match: A0A0F2PQM3_9HYPH (L-rhamnose mutarotase n=1 Tax=Hoeflea sp. BRH_c9 TaxID=1629712 RepID=A0A0F2PQM3_9HYPH) HSP 1 Score: 110 bits (275), Expect = 3.130e-29 Identity = 49/102 (48.04%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 40 ESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLLHYEIHLRREDGLLFAFVVRRRDHAMDSFRANPVWRRWQAYMADIL-VQDGDGPLRMPLERVFRL 342
E AF + + PGCE EYK+RHDEIWPE+ A+++ AG+ Y IHL E G+LFA + R+ H MD+ +PV + W AYMAD++ +GD P+ +PL+ VF++
Sbjct: 2 EKYAFKMMLNPGCETEYKKRHDEIWPELVALLRRAGISDYSIHLDAETGILFAVLWRKTGHGMDALPLDPVMQEWWAYMADLMQTGEGDQPVAVPLQTVFQM 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19969.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19969.1.1 >prot_P-wetherbeei_contig19969.1.1 ID=prot_P-wetherbeei_contig19969.1.1|Name=mRNA_P-wetherbeei_contig19969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp MEISNSIGPLPAAESAAFCLRVRPGCEDEYKRRHDEIWPEMRAMMQDAGLback to top mRNA from alignment at P-wetherbeei_contig19969:202..546- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19969.1.1 ID=mRNA_P-wetherbeei_contig19969.1.1|Name=mRNA_P-wetherbeei_contig19969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig19969:202..546- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19969:202..546- >mRNA_P-wetherbeei_contig19969.1.1 ID=mRNA_P-wetherbeei_contig19969.1.1|Name=mRNA_P-wetherbeei_contig19969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig19969:202..546- (Phaeothamnion wetherbeei SAG_119_79)back to top |