mRNA_P-wetherbeei_contig19927.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: A0A1Z5KL67_FISSO (DnaJ homolog subfamily C member 13 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL67_FISSO) HSP 1 Score: 95.1 bits (235), Expect = 1.160e-20 Identity = 48/95 (50.53%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 7 LVTQVLTENAPDAARSLQDTALSQALVLRHFHNACFSPSKHQRFISRWLCALWMCDSAGAGE--LLRRLVPAGMLQYLRMPVLSPAELQCLNELE 285
L+ +L +AP AA++++D ALS A++L HF+ A +SP + QRF+SR+LC+LW+ AG E LLRR+VP G L YL MP+LS E + L+ELE
Sbjct: 840 LLLHILLTHAPSAAKAIRDEALSLAVLLEHFYLAVYSPMEGQRFLSRYLCSLWLSGPAGCPEKRLLRRMVPHGFLTYLSMPLLSKVEEEQLDELE 934
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: A0A7R9U6R8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6R8_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.960e-19 Identity = 46/101 (45.54%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 1 SFLVTQVLTENAPDAARSLQDTALSQALVLRHFHNACFSPSKHQRFISRWLCALWMCDSAG--AGELLRRLVPAGMLQYLRMPVLSPAELQCLNELEDEIF 297
+ L+T ++T + P + ++ + A+S+A+VLRHF+N CFSPS QRFISR+L +WM S+ A LLRR++PA YL MP L+ E + L+E+E+E F
Sbjct: 159 ALLLTALVTRD-PKISDAVAEAAMSEAVVLRHFYNGCFSPSTDQRFISRYLIQIWMSGSSSGSAKRLLRRMLPAAFFTYLNMPRLTEPEERNLDEIEEEYF 258
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: A0A448YXQ5_9STRA (J domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXQ5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.080e-17 Identity = 41/102 (40.20%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 1 SFLVTQVLTENAPDAARSLQDTALSQALVLRHFHNACFSPSKHQRFISRWLCALWMCDSAGAGE--LLRRLVPAGMLQYLRMPVLSPAELQCLNELEDEIFD 300
S L+ +L +AP A ++++ +L+ ++L HFH A FSP QRF+SR+LC+LW+ E LL+R+VP G + YL+MP LS AE + L+ +E ++ +
Sbjct: 801 SALLLHLLNTHAPTVADAIREASLASGILLHHFHAAIFSPMAGQRFLSRFLCSLWLSGPMNCDEKKLLKRMVPRGFIPYLKMPPLSRAEEEQLDVIEQDVIE 902
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: A0A1E7FFA6_9STRA (J domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFA6_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.350e-16 Identity = 39/102 (38.24%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 1 SFLVTQVLTENAPDAARSLQDTALSQALVLRHFHNACFSPSKHQRFISRWLCALWMCDSAGAGE--LLRRLVPAGMLQYLRMPVLSPAELQCLNELEDEIFD 300
S L+ +L +AP + ++++ +L+ ++L HFH A FSP QRF+SR+LC+LW+ E LL+R+VP G + YL+MP LS E + L+ +E + +
Sbjct: 803 SALLLHLLNTHAPTVSGTIREASLASGILLHHFHAAIFSPMAGQRFLSRFLCSLWLSGPMNCDEKKLLKRMVPRGFIPYLKMPPLSRVEEEQLDVIEQDAIE 904
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: A0A482SZ65_9ARCH (J domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZ65_9ARCH) HSP 1 Score: 78.2 bits (191), Expect = 1.020e-14 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 1
Query: 22 LTENAPDAARSLQDTALSQALVLRHFHNACFSPSKHQRFISRWLCALWMCDSAGAGE---LLRRLVPAGMLQYLRMPVLSPAELQCLNELEDEIF 297
L +N P A ++ L ALVL+HF+NA FSPS QRF+SR+L A W+ S LL R++P+G+++YL+ +S Q L+ +ED+ +
Sbjct: 672 LLKNRPMVATGFKEMVLCDALVLKHFYNAIFSPSGTQRFLSRFLIATWLSGSVTTNPGKALLTRMIPSGLVEYLKFGAISEEHRQNLDSMEDDFY 766
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: A0A7S1H7E6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H7E6_HEMAN) HSP 1 Score: 63.5 bits (153), Expect = 3.980e-10 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 49 RSLQDTALSQALVLRHFHNACFSPSKHQRFISRWLCALWMCDSAGAGELLRRLVPAGMLQYLRMPVLSP 255
R++Q+ AL + +LRHFH+A F+ K QR ISR +CALW+ DS A L+ R++P G P P
Sbjct: 109 RAMQEAALREGALLRHFHSALFAQGKSQRDISRSMCALWLDDSPDAQSLVSRILPPGCTSLFIPPPPEP 177
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: UPI00189051E7 (dnaJ homolog subfamily C member 13 n=2 Tax=Manduca sexta TaxID=7130 RepID=UPI00189051E7) HSP 1 Score: 61.6 bits (148), Expect = 6.690e-9 Identity = 30/91 (32.97%), Postives = 54/91 (59.34%), Query Frame = 1
Query: 19 VLTENAPDAARSLQDTALSQALVLRHFHNACFSPSK-HQRFISRWLCALWMCDSAGAGELLRRLVPAGMLQYLRMPVLSPAELQCLNELED 288
++ E +Q AL++A + RH A ++P++ HQR ++R L ALW+ D A A +L++R++P+G+L +L PAE + +E+
Sbjct: 605 LIEEGGGGVGARMQALALAEAALPRHLLAALYAPARLHQRHLARHLLALWLVDHAPAHDLMKRIMPSGLLAFLESTEAPPAEALAADRVEE 695
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: A0A8I6SGY1_CIMLE (J domain-containing protein n=2 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6SGY1_CIMLE) HSP 1 Score: 60.5 bits (145), Expect = 1.700e-8 Identity = 32/92 (34.78%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 1 SFLVTQVLTENAPDAARSLQDTALSQALVLRHFHNACFSPSKHQRF-----ISRWLCALWMCDSAGAGELLRRLVPAGMLQYLRMPVLSPAE 261
S L+ ++ E D AR++Q+ ALS++ + RH A F+P + +SR L LW+ + ELL+RL+P+G+L YL + P E
Sbjct: 602 SLLMQAIIEEAEQDVARNMQELALSESALPRHLLTALFTPKTDLQMYTQCKLSRQLVGLWLAGNNNGMELLKRLLPSGLLAYLESDEIPPKE 693
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: UPI001E27C865 (dnaJ homolog subfamily C member 13 n=1 Tax=Colias crocea TaxID=72248 RepID=UPI001E27C865) HSP 1 Score: 59.7 bits (143), Expect = 3.170e-8 Identity = 33/91 (36.26%), Postives = 52/91 (57.14%), Query Frame = 1
Query: 7 LVTQVLTENAPDAARS-LQDTALSQALVLRHFHNACFSPSK------HQRFISRWLCALWMCDSAGAGELLRRLVPAGMLQYLRMPVLSPA 258
LVT+ L E S +Q AL++A + RH A + P++ H R ++R L ALW+ D A A +LL+R++P+G+L +L + PA
Sbjct: 587 LVTRALVEEGSGGVGSRIQGLALAEAALPRHLLTALYEPARSGLARLHHRHLARHLVALWLVDHAPAADLLKRIMPSGLLAFLESAEVPPA 677
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Match: G3R257_GORGO (DnaJ heat shock protein family (Hsp40) member C13 n=1 Tax=Gorilla gorilla gorilla TaxID=9595 RepID=G3R257_GORGO) HSP 1 Score: 59.7 bits (143), Expect = 3.180e-8 Identity = 32/84 (38.10%), Postives = 46/84 (54.76%), Query Frame = 1
Query: 19 VLTENAPDAARSLQDTALSQALVLRHFHNACFSPSKHQRFI-----SRWLCALWMCDSAGAGELLRRLVPAGMLQYLRMPVLSP 255
++ E + A +Q+ ALS+ + RH H A F+ S QR + SR L LW D+A A LL+R++P G+L YL L P
Sbjct: 588 IIEEGDKEIATKMQELALSEGALPRHLHTAMFTISSDQRMLTNRQLSRHLVGLWTADNATATNLLKRILPPGLLAYLESSDLVP 671 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19927.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19927.1.1 >prot_P-wetherbeei_contig19927.1.1 ID=prot_P-wetherbeei_contig19927.1.1|Name=mRNA_P-wetherbeei_contig19927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp SFLVTQVLTENAPDAARSLQDTALSQALVLRHFHNACFSPSKHQRFISRWback to top mRNA from alignment at P-wetherbeei_contig19927:142..525- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19927.1.1 ID=mRNA_P-wetherbeei_contig19927.1.1|Name=mRNA_P-wetherbeei_contig19927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig19927:142..525- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19927:142..525- >mRNA_P-wetherbeei_contig19927.1.1 ID=mRNA_P-wetherbeei_contig19927.1.1|Name=mRNA_P-wetherbeei_contig19927.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig19927:142..525- (Phaeothamnion wetherbeei SAG_119_79)back to top |