mRNA_P-wetherbeei_contig19896.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: A0A836CB35_9STRA (Immunophilin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB35_9STRA) HSP 1 Score: 166 bits (420), Expect = 5.200e-49 Identity = 75/121 (61.98%), Postives = 93/121 (76.86%), Query Frame = 1
Query: 7 TVVVVSPGPTEQWQRAEKLFPTQKVVYLNGALTETYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPE-KPSLREVSALVRDTSMDRFGIFNDRFSPGFGARL 366
TV+VV PG EQW+ EK F QK+++LN ++ TYDLGGPL ++ QAYY+KRVSKGW FRA P PW AYLEKPD S+E+L Y + KPSLRE+S VR+ S+ R+ IFNDRF+PGFG RL
Sbjct: 148 TVIVVQPGVAEQWRACEKRFTEQKLIFLNAPISTTYDLGGPLQSMEQAYYLKRVSKGWAFRAYPAPWTAYLEKPDSSVEVLCEYKDGKPSLRELSGSVREESLRRYAIFNDRFAPGFGGRL 268
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: A0A6V1RIV3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RIV3_HETAK) HSP 1 Score: 154 bits (389), Expect = 1.590e-43 Identity = 69/120 (57.50%), Postives = 92/120 (76.67%), Query Frame = 1
Query: 7 TVVVVSPGPTEQWQRAEKLFPTQKVVYLNGALTETYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPEKPSLREVSALVRDTSMDRFGIFNDRFSPGFGARL 366
TVV+V+PGPT W++A + FP QK+V+LN + E Y++G PL + AYY+KRVSKG+V R P PWK+YLE P+G E++ SY E+P LREVS +R TS++R+GIFNDRF+ GFGARL
Sbjct: 224 TVVIVNPGPTAVWKKALEQFPEQKLVFLNSLVYENYNIGAPLPGVETAYYLKRVSKGYVGRRYPSPWKSYLEGPEGQSEVMSSYDERPQLREVSEELRKTSLERYGIFNDRFAKGFGARL 343
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: D7FZ58_ECTSI (Immunophilin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ58_ECTSI) HSP 1 Score: 147 bits (370), Expect = 5.710e-41 Identity = 70/122 (57.38%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 7 TVVVVSPGPTEQWQRAEKLFPTQKVVYLNGALTETYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPEKPSLREVSALVRDTSMDRFGIFNDRFSPG--FGARL 366
TV+VV+PGPT +W + F QKV++LN L+ETYDLGGPL L Q YY+KRVSKG+VFR SP PW+A LEKP G +E+L Y EKP LR V+ +VR SM RFG+ NDR++ G RL
Sbjct: 194 TVIVVAPGPTAEWASCAQRFKEQKVIFLNAPLSETYDLGGPLKDLEQGYYLKRVSKGYVFRVSPKPWEALLEKPGGGLEILGKYNEKPLLRNVAKVVRSESMKRFGMSNDRWTNDKRLGGRL 315
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: A0A7S2XYT2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYT2_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.340e-40 Identity = 66/120 (55.00%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 7 TVVVVSPGPTEQWQRAEKLFPTQKVVYLNGALTETYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPEKPSLREVSALVRDTSMDRFGIFNDRFSPGFGARL 366
TV+VV+PG W +A+K+F QKVVYLN +TETYDLGGPL L Q+ Y KR+SKG+V R P W+ YL+KPD + E L + EKP LRE S L SM+R+G+ NDR++ GFG RL
Sbjct: 203 TVIVVNPGGNSVWNKADKMFQDQKVVYLNSLVTETYDLGGPLKDLEQSLYFKRISKGYVLRVFPNKWEVYLDKPDFTTEKLAVFDEKPKLREASKLTMQESMERYGVNNDRWAAGFGGRL 322
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: A0A6S9J3V2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9J3V2_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.800e-38 Identity = 67/121 (55.37%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 10 VVVVSPGPTEQWQRAEKLF--PTQKVVYLNGALTETYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPEKPSLREVSALVRDTSMDRFGIFNDRFSPGFGARL 366
++ V+PG E W R P V LN A + +YDLG +AYY+KRVSKGWVFR+ PGPW+AYLEKPDG++E+LKSY KP LRE++ALVR+ S R+ I NDR+SPGFG RL
Sbjct: 109 ILCVNPGGEETWDRIVSAHGSPGCPFVVLNNAYSTSYDLGNKRG-YEEAYYLKRVSKGWVFRSYPGPWQAYLEKPDGTVELLKSYKNKPPLREIAALVREESFKRYAINNDRWSPGFGERL 228
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: A0A7S3Q0R4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0R4_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.190e-38 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 10 VVVVSPGPTEQWQR--AEKLFPTQKVVYLNGALTETYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPEKPSLREVSALVRDTSMDRFGIFNDRFSPGFGARL 366
V+ ++PG E W R + P+ V LN A + TYDLG +AYY+KRVSKGW++RA PGPW+AYLEKPDG++E+L+S+ KP LREVSALVRD S R+ I NDR+S GFG RL
Sbjct: 171 VICINPGGEETWDRVLSAHTTPSSSFVVLNNAYSTTYDLGNKRG-YEEAYYLKRVSKGWIYRAYPGPWEAYLEKPDGNVELLQSFKTKPLLREVSALVRDESFKRYAINNDRWSSGFGGRL 290
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: A0A6V2QCT4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2QCT4_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.100e-37 Identity = 67/121 (55.37%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 10 VVVVSPGPTEQWQRAEKLF--PTQKVVYLNGALTETYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPEKPSLREVSALVRDTSMDRFGIFNDRFSPGFGARL 366
++ V+PG E W R P V LN A + +YDLG +AYY+KRVSKGWVFR+ PGPW+AYLEKPDG++E+LKSY KP LRE++ALVR+ S R+ I NDR+SPGFG RL
Sbjct: 181 ILCVNPGGEETWDRIVSAHGSPGCPFVVLNNAYSTSYDLGNKRG-YEEAYYLKRVSKGWVFRSYPGPWQAYLEKPDGTVELLKSYKNKPPLREIAALVREESFKRYAINNDRWSPGFGERL 300
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: A0A7S0VQN8_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VQN8_9CRYP) HSP 1 Score: 134 bits (336), Expect = 1.170e-37 Identity = 65/121 (53.72%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 10 VVVVSPGPTEQWQRAEKLFPTQKV-VYLNGALTE-TYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPEKPSLREVSALVRDTSMDRFGIFNDRFSPGFGARL 366
V+VV+PGP +QW+ +K V V+LN TY+LGGPL Q YY+KRVSKGWVFRA PG W+A +E PDG+ LK+Y E+P LR+VS LVRD S +G+ NDR++ GFG RL
Sbjct: 39 VIVVNPGPQDQWEECDKRTRGAGVSVFLNSISGGWTYELGGPLKDYEQVYYLKRVSKGWVFRAYPGKWQALVEAPDGTTVPLKTYDERPLLRDVSKLVRDFSFTNYGLMNDRYAKGFGGRL 159
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: A0A7S1UZ45_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ45_9STRA) HSP 1 Score: 135 bits (340), Expect = 5.300e-37 Identity = 62/121 (51.24%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 10 VVVVSPGPTEQWQRAEKLF--PTQKVVYLNGALTETYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPEKPSLREVSALVRDTSMDRFGIFNDRFSPGFGARL 366
+V ++PG E W+R P V LN A + Y+LG +AYY+KR+SKGWVFRA PGPW+AYLE+PDG +E++KSY +KP LR+V+ LVR+ S R+ I NDR++PGFG RL
Sbjct: 146 IVCINPGGEETWERLVSAHGSPNAPFVVLNNAYSTAYELGNQRG-FEEAYYLKRISKGWVFRAFPGPWQAYLERPDGKVELMKSYKKKPQLRDVATLVREESFKRYAINNDRWTPGFGERL 265
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Match: A0A7S1E2K1_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E2K1_9STRA) HSP 1 Score: 131 bits (330), Expect = 6.100e-37 Identity = 61/121 (50.41%), Postives = 80/121 (66.12%), Query Frame = 1
Query: 7 TVVVVSPGPTEQWQRAEKLFPTQ-KVVYLNGALTETYDLGGPLSTLTQAYYVKRVSKGWVFRASPGPWKAYLEKPDGSIEMLKSYPEKPSLREVSALVRDTSMDRFGIFNDRFSPGFGARL 366
T+V +PG E W R K ++ + LN A + TY LG + +AYYVKR+SKGW++R+ PGPW+AYLE+PD +E+LKSY KP LRE + LVR S RF I NDR++ GFG RL
Sbjct: 24 TIVCCNPGGEENWDRIRKASGSEGPFIVLNNAYSTTYGLGNKRADYEEAYYVKRISKGWIYRSFPGPWEAYLERPDCKVELLKSYRTKPELRECAELVRTESFKRFAINNDRWTSGFGGRL 144 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19896.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19896.1.1 >prot_P-wetherbeei_contig19896.1.1 ID=prot_P-wetherbeei_contig19896.1.1|Name=mRNA_P-wetherbeei_contig19896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp MGTVVVVSPGPTEQWQRAEKLFPTQKVVYLNGALTETYDLGGPLSTLTQAback to top mRNA from alignment at P-wetherbeei_contig19896:53..912+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19896.1.1 ID=mRNA_P-wetherbeei_contig19896.1.1|Name=mRNA_P-wetherbeei_contig19896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=860bp|location=Sequence derived from alignment at P-wetherbeei_contig19896:53..912+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19896:53..912+ >mRNA_P-wetherbeei_contig19896.1.1 ID=mRNA_P-wetherbeei_contig19896.1.1|Name=mRNA_P-wetherbeei_contig19896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig19896:53..912+ (Phaeothamnion wetherbeei SAG_119_79)back to top |