mRNA_P-wetherbeei_contig19797.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A836RE15_9BACT (ABC transporter substrate-binding protein (Fragment) n=1 Tax=Candidatus Atribacteria bacterium TaxID=2053509 RepID=A0A836RE15_9BACT) HSP 1 Score: 69.7 bits (169), Expect = 2.000e-12 Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 28 LVAAAAIDAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSWE 186
LV IDAVSLDPAVAYEF+S N C++ YDTL+ Y+ DF+ P P +A+SWE
Sbjct: 30 LVVGDRIDAVSLDPAVAYEFSSVNTCMNAYDTLIIYKAGDFSTPYPGIAESWE 82
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A1Q7RBB9_9BACT (SBP_bac_5 domain-containing protein n=1 Tax=Armatimonadetes bacterium 13_1_40CM_3_65_7 TaxID=1805024 RepID=A0A1Q7RBB9_9BACT) HSP 1 Score: 61.2 bits (147), Expect = 1.020e-9 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 10 GDHSSTLV-AAAAIDAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSWE 186
G +STLV A D +SLDPAVAYEFT L + Y+TLV+++GAD + KP+LAQSW+
Sbjct: 36 GGAASTLVWYADTSDLISLDPAVAYEFTGVLLAHNAYETLVKFDGADLSTIKPALAQSWD 95
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A535K3V3_9CHLR (ABC transporter substrate-binding protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535K3V3_9CHLR) HSP 1 Score: 61.6 bits (148), Expect = 1.410e-9 Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 19 SSTLVAAAAI-DAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSWE 186
+STLV A + D +SLDPAVAYEF+ L + Y+TLV++EGAD + KPSLAQSW+
Sbjct: 41 ASTLVWYADVSDLISLDPAVAYEFSGVLLAHNVYETLVKFEGADLSTIKPSLAQSWD 97
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A2G6KAB3_9BACT (SBP_bac_5 domain-containing protein n=1 Tax=candidate division KSB3 bacterium TaxID=2044937 RepID=A0A2G6KAB3_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 3.640e-9 Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 16 HSSTLVAAAAIDAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSWE 186
+ TLV VSLDPA AYE TS + Y+ L+ +EG DFTHP+P LA+SWE
Sbjct: 31 NKETLVIGMQDFTVSLDPAKAYEVTSWGMMTQLYERLINFEGDDFTHPEPELAESWE 87
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A1Q7RAT2_9BACT (SBP_bac_5 domain-containing protein (Fragment) n=3 Tax=Terrabacteria group TaxID=1783272 RepID=A0A1Q7RAT2_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 3.230e-8 Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 49 DAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSW 183
D +SLDPAVAYEF+ + + YDTLV +EG D T KP LAQSW
Sbjct: 39 DMISLDPAVAYEFSGVLVAQNLYDTLVAFEGEDLTTLKPRLAQSW 83
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A1F3BAK6_9BACT (ABC transporter substrate-binding protein n=1 Tax=Armatimonadetes bacterium RBG_19FT_COMBO_69_19 TaxID=1797289 RepID=A0A1F3BAK6_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 4.440e-8 Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 25 TLVAAAAI-DAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSWE 186
TLV A I D +SLDPAVAYEF+ + + YDTLV +EG D T KP LAQSW+
Sbjct: 29 TLVYVADISDMISLDPAVAYEFSGILVAQNAYDTLVAFEGEDLTTLKPRLAQSWK 83
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A1Q7FRN4_9BACT (SBP_bac_5 domain-containing protein n=1 Tax=Armatimonadetes bacterium 13_1_40CM_64_14 TaxID=1805026 RepID=A0A1Q7FRN4_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 6.070e-8 Identity = 27/45 (60.00%), Postives = 31/45 (68.89%), Query Frame = 1
Query: 49 DAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSW 183
D +SLDPAVAYEF+ + YDTLV +EG D T KP LAQSW
Sbjct: 20 DMISLDPAVAYEFSGILAATNIYDTLVAFEGEDLTTLKPRLAQSW 64
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A3M1RE75_9BACT (ABC transporter substrate-binding protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A3M1RE75_9BACT) HSP 1 Score: 56.2 bits (134), Expect = 1.140e-7 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 49 DAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSWE 186
DAVSLDPA AYEF+S + YD LV + G DFT +P LA+SW+
Sbjct: 42 DAVSLDPARAYEFSSVTIVEQLYDRLVEFLGGDFTKVQPGLAESWD 87
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A1Q7PGG9_9BACT (SBP_bac_5 domain-containing protein (Fragment) n=1 Tax=Armatimonadetes bacterium 13_1_40CM_3_65_7 TaxID=1805024 RepID=A0A1Q7PGG9_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 2.120e-7 Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 1
Query: 49 DAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSW 183
D +SLDPAVAYEF+ + + YDTLV +EG D T KP LA SW
Sbjct: 26 DMISLDPAVAYEFSGVLVAQNLYDTLVAFEGEDLTTLKPRLATSW 70
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Match: A0A7C2E648_9FIRM (ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C2E648_9FIRM) HSP 1 Score: 55.5 bits (132), Expect = 2.120e-7 Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 1
Query: 55 VSLDPAVAYEFTSANLCLDFYDTLVRYEGADFTHPKPSLAQSWE 186
+SLDPAVAYEF+ + + YDTLV +EG D T KP LAQSW+
Sbjct: 2 ISLDPAVAYEFSGILVAQNTYDTLVAFEGEDLTTLKPRLAQSWK 45 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19797.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19797.1.1 >prot_P-wetherbeei_contig19797.1.1 ID=prot_P-wetherbeei_contig19797.1.1|Name=mRNA_P-wetherbeei_contig19797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=62bp EPAGDHSSTLVAAAAIDAVSLDPAVAYEFTSANLCLDFYDTLVRYEGADFback to top mRNA from alignment at P-wetherbeei_contig19797:9..194- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19797.1.1 ID=mRNA_P-wetherbeei_contig19797.1.1|Name=mRNA_P-wetherbeei_contig19797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=186bp|location=Sequence derived from alignment at P-wetherbeei_contig19797:9..194- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19797:9..194- >mRNA_P-wetherbeei_contig19797.1.1 ID=mRNA_P-wetherbeei_contig19797.1.1|Name=mRNA_P-wetherbeei_contig19797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=186bp|location=Sequence derived from alignment at P-wetherbeei_contig19797:9..194- (Phaeothamnion wetherbeei SAG_119_79)back to top |