mRNA_P-wetherbeei_contig19446.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A661FP61_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A661FP61_9GAMM) HSP 1 Score: 161 bits (408), Expect = 1.320e-47 Identity = 76/118 (64.41%), Postives = 91/118 (77.12%), Query Frame = 3
Query: 303 MMRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRG-NSATVTLSGQELNWLLDGFDLRHWRPHAPLSYAGV 653
MMRP+N LPAVYLC VDFR INGLA V+ ALL DP SEQLF F NRRR +VKILYWER+GF +WQKRLE+ RF WPR +S +TL+GQ+LNWLLDG+D+ +RPH L ++ V
Sbjct: 1 MMRPSNDLPAVYLCRDVVDFRKGINGLAIVVEEALLQDPFSEQLFVFCNRRRDKVKILYWERSGFCMWQKRLEKARFKWPRKVDSEVITLTGQQLNWLLDGYDVMRFRPHERLHFSSV 118
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A1Y2KCK8_9PROT (Putative IS66 Orf2 family protein n=3 Tax=Magnetofaba TaxID=1472292 RepID=A0A1Y2KCK8_9PROT) HSP 1 Score: 160 bits (405), Expect = 3.740e-47 Identity = 78/119 (65.55%), Postives = 87/119 (73.11%), Query Frame = 3
Query: 303 MMRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRGNSATV-TLSGQELNWLLDGFDLRHWRPHAPLSYAGVA 656
MMRPAN LP VYLC PVDFR I GLAA V+ L LDPLS +LF FTNRRRT VKILYWERNGF LWQKRLE++RFHW R V +SGQ+LNWLLDG+D+ PH L Y V+
Sbjct: 1 MMRPANDLPDVYLCREPVDFRKGIAGLAALVEAELGLDPLSSRLFVFTNRRRTGVKILYWERNGFCLWQKRLEQERFHWLRRTDGVVGRISGQQLNWLLDGYDITRITPHKTLEYTCVS 119
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A2N6G8L3_9GAMM (Uncharacterized protein n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A2N6G8L3_9GAMM) HSP 1 Score: 159 bits (403), Expect = 7.520e-47 Identity = 74/118 (62.71%), Postives = 85/118 (72.03%), Query Frame = 3
Query: 303 MMRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRG-NSATVTLSGQELNWLLDGFDLRHWRPHAPLSYAGV 653
MMRP N LP +LC PVDFR I GLA V+ L LDP SE+LF FTNRRR VKILYWERNGF LWQK+LER+RF WP +SA VTL+GQ+LNWLLDG+D+ PH L Y +
Sbjct: 1 MMRPGNELPEAFLCKVPVDFRKGIQGLAVLVEAELTLDPFSERLFVFTNRRRDAVKILYWERNGFCLWQKKLERERFKWPNDLDSAVVTLTGQQLNWLLDGYDICRMTPHKALKYKSL 118
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A2N1WCN9_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-8 TaxID=2013804 RepID=A0A2N1WCN9_9GAMM) HSP 1 Score: 159 bits (401), Expect = 1.460e-46 Identity = 76/117 (64.96%), Postives = 86/117 (73.50%), Query Frame = 3
Query: 306 MRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRGNSATV-TLSGQELNWLLDGFDLRHWRPHAPLSYAGV 653
MRP+N LP VYLC VDFRL INGLAA V+ L LDP S QLF F NR R R+KILYWER+GF LWQKRLE RFHWPR TV TL+GQ+LNWLLDG+D+ +PH L Y+ V
Sbjct: 1 MRPSNELPLVYLCREAVDFRLGINGLAARVESVLQLDPFSAQLFVFCNRARDRIKILYWERSGFCLWQKRLEEARFHWPRRLDGTVITLTGQQLNWLLDGYDVMRLQPHTTLRYSRV 117
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A7C2K4Z5_9GAMM (Transposase n=1 Tax=Mizugakiibacter sp. TaxID=1972610 RepID=A0A7C2K4Z5_9GAMM) HSP 1 Score: 157 bits (398), Expect = 4.300e-46 Identity = 75/118 (63.56%), Postives = 87/118 (73.73%), Query Frame = 3
Query: 303 MMRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRG-NSATVTLSGQELNWLLDGFDLRHWRPHAPLSYAGV 653
MMRP+N LPAVYLC VDFR INGLA V+ AL DP SEQLF F NR+R ++KILYWERNGF LWQKRLER RF WPR S +TL+GQ+LNWLLDG+D+ +PH L + V
Sbjct: 1 MMRPSNELPAVYLCREVVDFRKGINGLAVLVEEALQHDPFSEQLFVFCNRKRDKIKILYWERNGFCLWQKRLERARFKWPRQMESDVITLTGQQLNWLLDGYDVMRLQPHERLHFRSV 118
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A661GUX2_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GUX2_9GAMM) HSP 1 Score: 157 bits (397), Expect = 6.090e-46 Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 3
Query: 303 MMRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRGNSA-TVTLSGQELNWLLDGFDLRHWRPHAPLSYAGV 653
MMRP+N +PAVYLC PVDFR INGLA V+ L ++P +EQL+ F NRRR ++K+LYWE NGF LWQKRLE+ RF+WPR +S VTL+ Q+LNWLLDG+D+ +PH L Y V
Sbjct: 1 MMRPSNDIPAVYLCRDPVDFRRGINGLAVLVEDTLRMNPFAEQLYIFCNRRRNQIKVLYWEANGFCLWQKRLEKSRFYWPRKSSEEVVTLTAQQLNWLLDGYDISRLQPHGKLCYTSV 118
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A6L8G583_9RHOB (IS66 family insertion sequence element accessory protein TnpB n=1 Tax=Boseongicola sp. SB0673_bin_14 TaxID=2604848 RepID=A0A6L8G583_9RHOB) HSP 1 Score: 157 bits (397), Expect = 7.120e-46 Identity = 76/117 (64.96%), Postives = 88/117 (75.21%), Query Frame = 3
Query: 303 MMRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRGNSATVTLSGQELNWLLDGFDLRHWRPHAPLSYAGV 653
M+RPA+ V+LCV PVDFR QI GLA VQ L +DP S QLF FTNRRRT+ +ILYWER GFVLWQKRLER RF WPR A V+LSG +LN+LLDG+DL RPHA L+YA +
Sbjct: 7 MIRPAHEGIEVWLCVEPVDFRKQITGLATLVQDTLAMDPFSAQLFVFTNRRRTQCRILYWERCGFVLWQKRLERARFVWPRHAEAVVSLSGAQLNFLLDGYDLWRMRPHARLAYASM 123
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A370DHF2_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A370DHF2_9GAMM) HSP 1 Score: 155 bits (393), Expect = 2.460e-45 Identity = 76/118 (64.41%), Postives = 87/118 (73.73%), Query Frame = 3
Query: 303 MMRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRGNS-ATVTLSGQELNWLLDGFDLRHWRPHAPLSYAGV 653
MMRP++ LPAVYLC VDFR INGLA V+ L DP SEQLF F NR+R +VKILYWERNGF LWQKRLER RF WPR + VTLSGQ+LNWLLDG+D+ +PH L Y+ V
Sbjct: 1 MMRPSSDLPAVYLCRNIVDFRKGINGLAVLVEEVLQHDPFSEQLFVFCNRKRDKVKILYWERNGFCLWQKRLERARFKWPRRVADEVVTLSGQQLNWLLDGYDVMRMQPHDRLHYSSV 118
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A7C2P2E7_9GAMM (Transposase n=1 Tax=Mizugakiibacter sp. TaxID=1972610 RepID=A0A7C2P2E7_9GAMM) HSP 1 Score: 155 bits (391), Expect = 4.780e-45 Identity = 74/117 (63.25%), Postives = 85/117 (72.65%), Query Frame = 3
Query: 306 MRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRG-NSATVTLSGQELNWLLDGFDLRHWRPHAPLSYAGV 653
MRP+N LP VYLC VDFR INGL+ V+ AL LDP SEQLF F NR+R RVK+LYWERNGF LWQKRLER RF WPR V L+GQ+LNWLLDG+D+ +PH L Y+ V
Sbjct: 1 MRPSNELPVVYLCRDIVDFRKGINGLSVLVEEALKLDPFSEQLFVFCNRKRDRVKMLYWERNGFCLWQKRLERARFKWPRRVTDEVVVLNGQQLNWLLDGYDVMRMQPHERLHYSSV 117
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Match: A0A359ESF3_9GAMM (Uncharacterized protein n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A359ESF3_9GAMM) HSP 1 Score: 153 bits (386), Expect = 2.820e-44 Identity = 75/118 (63.56%), Postives = 86/118 (72.88%), Query Frame = 3
Query: 303 MMRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRRRTRVKILYWERNGFVLWQKRLERDRFHWPRGNS-ATVTLSGQELNWLLDGFDLRHWRPHAPLSYAGV 653
MMRPAN PAVYLC +DFR INGLA V+ AL DP SEQLF F NRRRT VKILYWER+GF LWQKRLE+ RF WPR + + +TL+ Q+LNWLLDG D+ +PHA L Y V
Sbjct: 1 MMRPANDGPAVYLCRDSIDFRKGINGLAILVEQALEQDPFSEQLFVFCNRRRTSVKILYWERSGFCLWQKRLEQARFPWPRLHEHSVITLTPQQLNWLLDGIDITRLQPHASLQYDSV 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19446.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19446.1.1 >prot_P-wetherbeei_contig19446.1.1 ID=prot_P-wetherbeei_contig19446.1.1|Name=mRNA_P-wetherbeei_contig19446.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp MMRPANSLPAVYLCVAPVDFRLQINGLAACVQGALLLDPLSEQLFAFTNRback to top mRNA from alignment at P-wetherbeei_contig19446:165..823- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19446.1.1 ID=mRNA_P-wetherbeei_contig19446.1.1|Name=mRNA_P-wetherbeei_contig19446.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=659bp|location=Sequence derived from alignment at P-wetherbeei_contig19446:165..823- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19446:165..823- >mRNA_P-wetherbeei_contig19446.1.1 ID=mRNA_P-wetherbeei_contig19446.1.1|Name=mRNA_P-wetherbeei_contig19446.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig19446:165..823- (Phaeothamnion wetherbeei SAG_119_79)back to top |