mRNA_P-wetherbeei_contig19254.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: D8LRM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM7_ECTSI) HSP 1 Score: 125 bits (313), Expect = 2.450e-31 Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 3
Query: 165 ALCLCWVAVDGVASGWADGAVRCFEAGGGRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
AL LCW+ + V +GW+D +VRC++A G + W I AHR AVT A R ++ ASFLV+GA DG+V VWSLRTR++ ++F EH V VL D A LVHSAG DC VLTYDL+
Sbjct: 105 ALFLCWLGDEAVVTGWSDCSVRCYDAATGALRWAIPKAHRAAVTCCAVRFDSSASFLVTGAEDGSVSVWSLRTRELLLRFSEHQKGVTTVLVDVASPNLVHSAGTDCTVLTYDLR 219
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: A0A7S2FKB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKB8_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.190e-30 Identity = 60/117 (51.28%), Postives = 79/117 (67.52%), Query Frame = 3
Query: 159 GGALCLCWVAVDGVASGWADGAVRCFEAGGGRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
GGA C+CW+ V SGW D VRC +A + +WEI AHRGAVT VA +A S+++SG DG+VR+W+LR+R++ +QF EH V+ VL D LVHSAG DC+V TYDL+
Sbjct: 200 GGARCMCWIGDTAVVSGWEDHFVRCHDASTMQALWEIPNAHRGAVTTVATHSDASLSYVLSGGEDGSVRIWALRSRELMLQFVEHKKGVSQVLVDVKSPNLVHSAGLDCSVFTYDLR 316
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: A0A7S2BHX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHX7_9STRA) HSP 1 Score: 124 bits (312), Expect = 5.800e-30 Identity = 60/117 (51.28%), Postives = 79/117 (67.52%), Query Frame = 3
Query: 159 GGALCLCWVAVDGVASGWADGAVRCFEAGGGRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
GGA C+CW+ V SGW D VRC +A + +WEI AHRGAVT VA +A S+++SG DG+VR+W+LR+R++ +QF EH V+ VL D LVHSAG DC+V TYDL+
Sbjct: 479 GGARCMCWIGDTAVVSGWEDHFVRCHDASTMQALWEIPNAHRGAVTTVATHSDASLSYVLSGGEDGSVRIWALRSRELMLQFVEHKKGVSQVLVDVKSPNLVHSAGLDCSVFTYDLR 595
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: A0A7S2UWQ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ1_9STRA) HSP 1 Score: 116 bits (290), Expect = 5.090e-27 Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 3
Query: 159 GGALCLCWVAVDGVASGWADGAVRCFEAGG-GRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
G LC+ WV VA+GW D VRC+ G M W I AHR A+T++A + ++V+GA DGAVR+W+LR+R+M +QF EH V+ V+ D + LVHSAG DCAVLTYD+Q
Sbjct: 417 GALLCMGWVGTTRVATGWEDCCVRCYNVEAQGAMEWHIPNAHRAAITSLAVHHDERLGYIVTGAKDGAVRLWNLRSREMLLQFTEHQKGVSKVIVDVRLPKLVHSAGLDCAVLTYDIQ 534
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: A0A7S2SRF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRF7_9STRA) HSP 1 Score: 116 bits (290), Expect = 5.220e-27 Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 3
Query: 162 GALCLCWVAVDGVASGWADGAVRCFEAGGGRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
G C+ WV + +GW D +RC +A + +W + AHRG VTAVA +A S+LVSG DGAVRVWSLR+R++ +QF EH PV VL D L+HS+ DC +LTYD++
Sbjct: 431 GDACIAWVGDSAIVTGWRDRFIRCHDAATMQQLWHLPNAHRGPVTAVATHSDASLSYLVSGGEDGAVRVWSLRSRELLLQFTEHKKPVTRVLVDVKSPHLIHSSSLDCQLLTYDVK 546
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: A0A662YFZ8_9STRA (Cilia- and flagella-associated protein 52 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFZ8_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.050e-18 Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 3
Query: 204 SGWADGAVRCFEAGGGRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
SGWADG +R ++A + W IA AHRG VTAVA A ++VSGA+DG V +WS TR++ +QF EH V VL D VHS G+D A+ YDL+
Sbjct: 381 SGWADGWLRAYDAATAQPKWHIATAHRGEVTAVAC----SAQYVVSGASDGGVSIWSFATRELVLQFHEHKRAVTGVLVDVCKPHFVHSCGQDKALFIYDLK 478
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: A0A5D6XH67_9STRA (5'-nucleotidase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH67_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.240e-18 Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 3
Query: 198 VASGWADGAVRCFEAGGGRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
V SGWADG +R ++A W IA AHRG VT+VA+ A+++VSGA+DGAV VWS TR++ +QF EH V+ VL D VHS G D A+ YDL+
Sbjct: 751 VLSGWADGWLRAYDAATAHCKWHIANAHRGHVTSVAS----SATYVVSGASDGAVSVWSALTRELVLQFHEHKRGVSQVLVDVGKPHWVHSCGLDKALFAYDLK 850
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: A0A329RU02_9STRA (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A329RU02_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.360e-18 Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 3
Query: 204 SGWADGAVRCFEAGGGRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
SGWADG +R ++A + W IA AHRG VTAVA A ++VSGA+DG V +WS TR++ +QF EH V VL D + VHS G D A+ YDL+
Sbjct: 470 SGWADGWLRAYDAATAQPKWHIATAHRGEVTAVAC----SAQYIVSGASDGGVSIWSFATRELVLQFHEHKRAVTGVLVDVKLPHRVHSCGVDKALFIYDLK 567
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: A0A833W4Z2_PHYIN (Cilia- and flagella-associated protein 52 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W4Z2_PHYIN) HSP 1 Score: 90.1 bits (222), Expect = 7.290e-18 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 3
Query: 204 SGWADGAVRCFEAGGGRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
SGW DG +R ++A + W IA AHRG VTAVA A ++VSGA+DG V +WS TR++ +QF EH V+ VL D + VHS G D A+ YDL+
Sbjct: 469 SGWVDGWLRAYDAASAQPKWHIATAHRGEVTAVAC----SAQYIVSGASDGGVSIWSFATRELVLQFHEHKRAVSGVLVDVKLPHRVHSCGVDKALFIYDLK 566
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Match: A0A7S3MYW1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3MYW1_9SPIT) HSP 1 Score: 89.7 bits (221), Expect = 9.250e-18 Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 3
Query: 162 GALCLCWVAVDGVASGWADGAVRCFEAGGGRMVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFCEHSGPVAAVLPDNAVAALVHSAGRDCAVLTYDLQ 509
G+ C + D V +GW DG +RCF+ + WE+A AHRGAVTA+ A+A++++SG +GAVRVW+ R++ +QF + V ++ PD L+HS D + TYDL+
Sbjct: 323 GSSCCISLDDDSVITGWRDGFIRCFDKQTHALQWEVANAHRGAVTAL----YADANYILSGGQEGAVRVWARTNRKLLIQFNDQKKDVVSLFPDLNQPHLIHSCSMDRTISTYDLK 434 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19254.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19254.1.1 >prot_P-wetherbeei_contig19254.1.1 ID=prot_P-wetherbeei_contig19254.1.1|Name=mRNA_P-wetherbeei_contig19254.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=86bp MVWEIAGAHRGAVTAVAARGEAEASFLVSGAADGAVRVWSLRTRQMTMQFback to top mRNA from alignment at P-wetherbeei_contig19254:214..1139+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19254.1.1 ID=mRNA_P-wetherbeei_contig19254.1.1|Name=mRNA_P-wetherbeei_contig19254.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=926bp|location=Sequence derived from alignment at P-wetherbeei_contig19254:214..1139+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19254:214..1139+ >mRNA_P-wetherbeei_contig19254.1.1 ID=mRNA_P-wetherbeei_contig19254.1.1|Name=mRNA_P-wetherbeei_contig19254.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=258bp|location=Sequence derived from alignment at P-wetherbeei_contig19254:214..1139+ (Phaeothamnion wetherbeei SAG_119_79)back to top |