mRNA_P-wetherbeei_contig19185.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A345ZWJ4_9HYPH (IclR family transcriptional regulator n=2 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZWJ4_9HYPH) HSP 1 Score: 384 bits (986), Expect = 1.000e-132 Identity = 206/255 (80.78%), Postives = 225/255 (88.24%), Query Frame = 1
Query: 10 MDRHTANDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 774
M R NDKSQVQVIARAA ILRALEDEN+GLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDF+SLARP LERLSAEL ETVDLSTVKKDHLVFIDQV+GS RLRTVS VGETFPL+CTANGK+YLAQLSD+AV ALIG +YE RT +++T +D LL ELK +R GVAFDREEHT GICAAGVAL DPLGN+VAISVPVP+ RF ++ IAE+LLATK LE RM ++A
Sbjct: 5 MSRLVTNDKSQVQVIARAATILRALEDENAGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFVSLARPFLERLSAELHETVDLSTVKKDHLVFIDQVVGSQRLRTVSGVGETFPLHCTANGKAYLAQLSDSAVEALIGRSYEARTARSITKIDTLLNELKVVRRIGVAFDREEHTEGICAAGVALHDPLGNAVAISVPVPSLRFANQANHIAERLLATKRALEGRMNASA 259
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A140GW30_9HYPH (IclR family transcriptional regulator n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GW30_9HYPH) HSP 1 Score: 349 bits (896), Expect = 4.040e-119 Identity = 183/249 (73.49%), Postives = 216/249 (86.75%), Query Frame = 1
Query: 28 NDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 774
+DK+QVQVIARAA ILRALE E++GLSLGQIA RV LARSTVQRIVA+LETEKL+IAA+PNGRVRLGP I+RLA+SV DF++ ARP L RLS EL ETVDL+TV++DHL+FIDQVIGSHRLRTVSAVGETFPLYCTANGK+YL+ L + V LIG++YE RTP TLT L ALLAEL+T+R G+A+DREEHTLGICA GVAL DPLGN+VAISVPVP+ RF+ +Q LIAE+LLATKH +++ +AA
Sbjct: 5 SDKNQVQVIARAAHILRALEGEDAGLSLGQIAARVGLARSTVQRIVASLETEKLLIAASPNGRVRLGPAILRLASSVTGDFVARARPHLMRLSEELCETVDLATVRRDHLMFIDQVIGSHRLRTVSAVGETFPLYCTANGKAYLSSLDELEVEQLIGKSYEARTPNTLTKLPALLAELRTVRKNGIAYDREEHTLGICAVGVALHDPLGNAVAISVPVPSQRFREQQRLIAERLLATKHAMQADWSAAA 253
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A1Q4DJG4_9HYPH (Uncharacterized protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DJG4_9HYPH) HSP 1 Score: 346 bits (888), Expect = 8.500e-118 Identity = 186/249 (74.70%), Postives = 210/249 (84.34%), Query Frame = 1
Query: 28 NDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 774
++ SQVQVIARAA ILRALEDE GLSLGQIAQRV LARSTVQRIVAALE EKL+IAATPNGRVRLGP I+RLAASVRSDF+ ARP L RLS EL+ETVDL+TVKKDHL+FIDQV+GS RLRT +AVGETFPL+CTANGK+YLA+L++ V ALIG Y RTPKT+T LD LLAEL TIR GVAFDREEHTLGI A GVA+ DPLGN VAISVPVPT RF +RQ IAE+L+ATK L +++ + A
Sbjct: 12 SENSQVQVIARAACILRALEDETHGLSLGQIAQRVGLARSTVQRIVAALEGEKLLIAATPNGRVRLGPAILRLAASVRSDFVHQARPFLTRLSQELQETVDLATVKKDHLIFIDQVVGSQRLRTEAAVGETFPLHCTANGKAYLAKLTNEQVEALIGRDYAERTPKTITRLDPLLAELATIRKIGVAFDREEHTLGISAVGVAMHDPLGNPVAISVPVPTPRFVNRQTQIAERLMATKRALLAQLNAKA 260
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A6L5FI52_9HYPH (Helix-turn-helix domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FI52_9HYPH) HSP 1 Score: 345 bits (885), Expect = 2.190e-117 Identity = 184/248 (74.19%), Postives = 209/248 (84.27%), Query Frame = 1
Query: 28 NDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSA 771
+DKSQVQVIARAAAILRALED+ SGLSLGQIAQRV+LARSTVQRIVAALE EKLVIAA+PNGRVRLGPTI+RLAASVR+DF+SLA P L +LS EL ETVDL+ VK+DHLVF+DQVIG RLRTVSAVG++FPLYCTANGK+YLAQL + LIG TYE RTPKTLT LD LL +L +R +GVA+DREEHTLGICAAGVAL+D LGN VA+SVPVP RF+ Q IA +LLATK L + +A
Sbjct: 10 SDKSQVQVIARAAAILRALEDQASGLSLGQIAQRVDLARSTVQRIVAALEAEKLVIAASPNGRVRLGPTILRLAASVRTDFVSLAHPFLVKLSHELRETVDLAVVKRDHLVFVDQVIGPQRLRTVSAVGDSFPLYCTANGKAYLAQLERPVIEQLIGRTYEKRTPKTLTRLDDLLKDLDAVRKSGVAYDREEHTLGICAAGVALRDALGNYVAVSVPVPAQRFKENQEPIAGRLLATKRALADDLSAA 257
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A327KVD0_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KVD0_9HYPH) HSP 1 Score: 341 bits (875), Expect = 7.520e-116 Identity = 177/248 (71.37%), Postives = 214/248 (86.29%), Query Frame = 1
Query: 31 DKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 774
++ VQVI RAAAILRALED+ +GLSLGQIAQRV+LARSTVQRIVAALE EKL+IAA+PNGRVRLGPT++RLAASV+SDF+SL RP L RLS EL ETVDL+ V++D +VFIDQV+GS RLRTVSAVGETFPLYCTANGK+YLAQL + A+ LIG +Y RTP TLT+LD+L+ +L+ +R +GVAFDREEHT+G+CAAGV L+D LGN VAISVPVP RF +A IAE+LLATKH +ES++++AA
Sbjct: 11 ERGPVQVITRAAAILRALEDQPAGLSLGQIAQRVDLARSTVQRIVAALEAEKLLIAASPNGRVRLGPTLLRLAASVQSDFVSLCRPYLLRLSNELRETVDLAAVRRDGMVFIDQVVGSQRLRTVSAVGETFPLYCTANGKAYLAQLGNDAIEQLIGRSYPARTPHTLTSLDSLVQDLRRVRRSGVAFDREEHTVGVCAAGVVLRDTLGNYVAISVPVPAQRFVDHEAAIAERLLATKHAVESQLEAAA 258
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A327KZS6_9HYPH (Uncharacterized protein n=2 Tax=Rhodoplanes TaxID=29407 RepID=A0A327KZS6_9HYPH) HSP 1 Score: 336 bits (862), Expect = 7.130e-114 Identity = 176/258 (68.22%), Postives = 213/258 (82.56%), Query Frame = 1
Query: 1 LRKMDRHTANDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 774
+++ D ++ VQVI RAA+ILRALED+ +GLSLGQIAQRV+LARSTVQRIVAALE EKL+IAA+P GRVRLGPT++RLA+SV+SDF+SL RP L +LSAEL ETVDL+ +K+D+L+F+DQVIGS RLR VS+VGETFPLYCTANGK+YLAQL + AV L+G +Y RTP TLTT DALL +L+ IR GVAFDREEHT+G+CAAGV L+D LGN +AISVPVP RF RQ IAE LLATK LE +++SAA
Sbjct: 1 MKRADAPDQAERGPVQVITRAASILRALEDQPAGLSLGQIAQRVDLARSTVQRIVAALEAEKLLIAASPTGRVRLGPTLLRLASSVQSDFVSLCRPWLVKLSAELSETVDLAAIKRDYLIFLDQVIGSQRLRAVSSVGETFPLYCTANGKAYLAQLGNDAVEELVGRSYPARTPTTLTTYDALLQDLRRIRRTGVAFDREEHTVGVCAAGVVLRDSLGNYLAISVPVPAQRFYDRQTEIAEHLLATKRALEDQLESAA 258
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A1W6ZT89_9HYPH (Uncharacterized protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZT89_9HYPH) HSP 1 Score: 324 bits (831), Expect = 4.370e-109 Identity = 173/249 (69.48%), Postives = 201/249 (80.72%), Query Frame = 1
Query: 13 DRHTANDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESR 759
D+ +KSQVQVIARAAAI+RALED +GLSLG+IA +V LARSTVQRIVAALETEKLV+AA+P GRVRLGPTI+RLA SVR+DF ++A+P L LS EL ETVDL+++K DHLVFIDQVIGS RLRTVSAVGE FPLYCTANGK+YLAQL D + LIG+ Y+ RTP TLT L LL +++ R G A DREEH LGICAAGVA++D LGN VAISVPVPT RF+S +A I +LLATK LE R
Sbjct: 10 DQTATIEKSQVQVIARAAAIMRALEDTTTGLSLGEIALKVGLARSTVQRIVAALETEKLVVAASPAGRVRLGPTILRLAGSVRTDFATIAKPFLVELSKELHETVDLASIKGDHLVFIDQVIGSQRLRTVSAVGEAFPLYCTANGKAYLAQLDDAQIETLIGKIYKARTPSTLTKLSQLLDDIRAARRDGYAIDREEHALGICAAGVAMRDMLGNYVAISVPVPTQRFESERANICARLLATKRVLEDR 258
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A6N7H121_9HYPH (Helix-turn-helix domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H121_9HYPH) HSP 1 Score: 323 bits (827), Expect = 1.350e-108 Identity = 173/247 (70.04%), Postives = 198/247 (80.16%), Query Frame = 1
Query: 10 MDRHTANDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHEL 750
MD N K+Q+QVIARAAAILRALE++ +GLSL QIAQ V LARSTVQRIVAALE EKLVIAA+P GRVRLGPTI RLA SV +DF+S ARP L +LS EL ETVDL+T+ DHLVF+DQV G RLR VSAVGE FPL+CTANGK+YLA+LSD VA LIG+TYE RTPKTLT L LL +LK +R +GVA DREEHTLGICAAG+ + D +GN VAISVPVP RF ++QA IA+ LL TK L
Sbjct: 1 MDVRLPNGKNQIQVIARAAAILRALENQAAGLSLAQIAQHVGLARSTVQRIVAALEAEKLVIAASPTGRVRLGPTIQRLATSVGADFVSAARPFLVKLSQELNETVDLATIHNDHLVFVDQVTGPQRLRAVSAVGEAFPLHCTANGKAYLAELSDEEVARLIGKTYEQRTPKTLTRLKDLLKDLKMVRKSGVALDREEHTLGICAAGIVMTDFVGNHVAISVPVPAQRFATQQARIAKSLLTTKRAL 247
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: UPI0010BE2E1C (IclR family transcriptional regulator n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI0010BE2E1C) HSP 1 Score: 310 bits (793), Expect = 1.980e-103 Identity = 159/234 (67.95%), Postives = 197/234 (84.19%), Query Frame = 1
Query: 31 DKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLL 732
DKS VQVIARA +ILR+LED+ SGLSLG+IA RV+LARSTVQRIVAAL EK++IAA+PNGRVRLGPTI+RLA+SV +DF ++AR ++ LS +L ETVD++T+K DHLVF+DQV+G HRL+ VSAVGE FPL+CTANGK+YLAQL D+ V L+G T+E RT ++T L LL ELKTIR +GVAFDREEHT+GICA GVAL+DP+GN +AISVPVP RF+ R+ +AE+LL
Sbjct: 12 DKSPVQVIARAISILRSLEDQPSGLSLGEIAARVHLARSTVQRIVAALAAEKVLIAASPNGRVRLGPTILRLASSVPNDFATMARSYVQALSKKLGETVDIATIKGDHLVFVDQVVGPHRLKAVSAVGEAFPLHCTANGKAYLAQLDDSEVEKLLGRTFEKRTSNSITDLPTLLKELKTIRKSGVAFDREEHTVGICAVGVALRDPVGNPIAISVPVPEPRFRGREHFLAEQLL 245
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A502FSH9_9PROT (IclR family transcriptional regulator n=4 Tax=Roseomonas TaxID=125216 RepID=A0A502FSH9_9PROT) HSP 1 Score: 303 bits (775), Expect = 1.730e-100 Identity = 157/243 (64.61%), Postives = 193/243 (79.42%), Query Frame = 1
Query: 31 DKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESR 759
+K+Q+QVI RAAA+LR+LE++ GLSLGQIA +V LARSTVQRIVAALE+EKLV+AATP GRVRLGP ++RLAASV ++ +LA P + LSA L ETVD + V++DHL+F+DQV+G RL+ VSAVGETFPLYCTANGK+YLA LSD + ALIG +Y RTP TLTT + LL E++ R AG A DREEH LGI A GVAL+D +GN VA+SVPVPT RF+ R+ IAE+LL TK L +R
Sbjct: 22 EKNQIQVIGRAAAVLRSLENQPHGLSLGQIAAKVELARSTVQRIVAALESEKLVVAATPGGRVRLGPALLRLAASVETNVAALAHPFIAELSASLGETVDFAAVRRDHLIFVDQVVGMQRLQAVSAVGETFPLYCTANGKAYLATLSDDEIVALIGRSYARRTPNTLTTAEPLLEEIRAARQAGFAVDREEHVLGISAVGVALRDMMGNPVAVSVPVPTQRFRGREEDIAERLLETKRALGAR 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19185.1.1 >prot_P-wetherbeei_contig19185.1.1 ID=prot_P-wetherbeei_contig19185.1.1|Name=mRNA_P-wetherbeei_contig19185.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp MDRHTANDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRback to top mRNA from alignment at P-wetherbeei_contig19185:345..1124+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19185.1.1 ID=mRNA_P-wetherbeei_contig19185.1.1|Name=mRNA_P-wetherbeei_contig19185.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig19185:345..1124+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19185:345..1124+ >mRNA_P-wetherbeei_contig19185.1.1 ID=mRNA_P-wetherbeei_contig19185.1.1|Name=mRNA_P-wetherbeei_contig19185.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig19185:345..1124+ (Phaeothamnion wetherbeei SAG_119_79)back to top |