mRNA_P-wetherbeei_contig1905.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1905.4.1
Unique NamemRNA_P-wetherbeei_contig1905.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: D8LGU0_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU0_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 1.630e-90
Identity = 147/216 (68.06%), Postives = 170/216 (78.70%), Query Frame = 1 
Query:    1 EDGVSKLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            E GVS L V +G R L+FETG++GRQA GAV+  DGETV+YSTAC +      +F PL+VDYMERFSAAGMTSGGYNKRDGRASDKE L+SRLMDRPLRP +  GW HETQLL+WVLSYD V    PLAIT+A+AAL LS++PL R +AGVTVGMD+EG  +VNP+  V     L LT+AGTADGVLMIEG  DF+ EE MM+AIEVGHAAVR  C
Sbjct:   20 EGGVSVLRVTVGGRDLSFETGKVGRQASGAVMARDGETVVYSTACTDRKTTTSNFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLVRAIAGVTVGMDSEGELVVNPEISVAAMSPLNLTIAGTADGVLMIEGESDFVCEEDMMRAIEVGHAAVRDLC 235
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A835ZC49_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC49_9STRA)

HSP 1 Score: 288 bits (738), Expect = 5.550e-90
Identity = 135/178 (75.84%), Postives = 158/178 (88.76%), Query Frame = 1 
Query:  115 VLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            +LY+TACA+ S G LDF PLKVDY ERFS+AGMTSGGYNKRDGRAS+KE+L+SRL+DRPLRPMIA+GWTHETQL+TWV+SYDG R  EPLAITSA+A+LCLS +P+ R VAGVTVGMD EG ++VNPD+ + +E RLTL+LAGTA+GVLMIEGACDFLTEEQM+ AIE GHAAVR  C
Sbjct:    1 MLYTTACADSSAGLLDFAPLKVDYQERFSSAGMTSGGYNKRDGRASEKEVLVSRLIDRPLRPMIAQGWTHETQLITWVVSYDGSRPPEPLAITSASASLCLSQVPMRRAVAGVTVGMDGEGNYVVNPDKAIADESRLTLSLAGTAEGVLMIEGACDFLTEEQMVSAIEAGHAAVREIC 178
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A2K1KFQ2_PHYPA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KFQ2_PHYPA)

HSP 1 Score: 258 bits (659), Expect = 1.850e-77
Identity = 131/212 (61.79%), Postives = 160/212 (75.47%), Query Frame = 1 
Query:   19 LVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACA--EPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            + + +G R +  ETG IGRQA+GAV +TDGETVLY+T C+  +PS  P DFVPL V Y ERFSAAG TSGG+ KR+GR  D E+L+ RL+DRP+RPMIA G+ +ETQ+L WVLSYDGV   +PLAITSA AAL +S IP+++PVAGV VG+   G FIVNP    +E   L L +AGTAD  LMIEG CDFLTEE++MKA+EVGH AVR  C
Sbjct:   98 VTIPVGNREIVVETGLIGRQANGAVTVTDGETVLYTTVCSSSDPSE-PSDFVPLSVQYQERFSAAGRTSGGFVKREGRVRDHEVLVCRLIDRPIRPMIAHGFHYETQVLVWVLSYDGVHSPDPLAITSAGAALAVSDIPMSKPVAGVRVGL-VNGEFIVNPTVGEMENSTLDLVIAGTADATLMIEGYCDFLTEEELMKAVEVGHDAVRAIC 307
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A8J4LXC3_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LXC3_9CHLO)

HSP 1 Score: 248 bits (632), Expect = 1.130e-76
Identity = 120/202 (59.41%), Postives = 154/202 (76.24%), Query Frame = 1 
Query:   46 LTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSG-GPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            +T ETG IGRQA+GA++ T GET++Y+TAC  PS  G   F+PL V+Y ERFSAAG TSGG+ KRDGR  D E+L+SRL+DRPLRPM A+GW +ETQ+L WVLSYDG+ + EP+AIT+AAAAL +S IPL + VAGV VG+   G F++NP    ++  RL L +AGT D +LMIEG CDFLTEEQM++A+ VG  A+ + C
Sbjct:   99 ITLETGEIGRQANGAIMATCGETMIYATACCSPSPTGDGSFLPLTVNYAERFSAAGRTSGGFIKRDGRPRDAEVLVSRLVDRPLRPMFAKGWANETQVLEWVLSYDGINEPEPIAITAAAAALLISDIPLEKAVAGVRVGLLPGGEFVINPTLEQMKASRLDLMVAGTRDAILMIEGFCDFLTEEQMIEALAVGSKAITSLC 300
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A7R9VJZ5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VJZ5_9CHLO)

HSP 1 Score: 244 bits (622), Expect = 1.680e-76
Identity = 118/212 (55.66%), Postives = 153/212 (72.17%), Query Frame = 1 
Query:   16 KLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDA-EGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            ++ + +G   +  ETG IGRQA+GA++ + GET++Y+TAC   S G   FVPL V+Y ERFSAAG T+GGY KRDGR  D ++L+SRL+DRP+RPM  +GW  ETQ+L WV+SYDGV   EPLAIT+AAAAL +S IP  + VAGV VG  A + R ++NP     +   L L +AGT D +LMIEG CDFLTEEQM++A+E GHAAV + C
Sbjct:   45 RVTLPVGNTEIVLETGEIGRQANGAIMASCGETMVYATACCGGSAGDGSFVPLTVNYSERFSAAGRTAGGYIKRDGRTKDSDVLVSRLVDRPIRPMFKKGWASETQVLEWVMSYDGVNCPEPLAITAAAAALLVSDIPFEKAVAGVRVGYIAKDDRIVINPSMQEQQRSALDLMVAGTRDAILMIEGFCDFLTEEQMLRAVEAGHAAVSSMC 256
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A388KJ89_CHABU (Polyribonucleotide nucleotidyltransferase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJ89_CHABU)

HSP 1 Score: 258 bits (660), Expect = 1.710e-76
Identity = 128/211 (60.66%), Postives = 164/211 (77.73%), Query Frame = 1 
Query:   19 LVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACA-EPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            L + +G R++T ETG IGRQA+GAV +TDGETVL++T CA E +    DFVPL V+Y ER SA G TSGG+ KR+GR  D E+L  RL+DRPLRP++ EG+ HETQ+L+WVLSYDGV  TEPLAIT+A AA+ +S IPL +P+AGV VGM A+GRF+VNP    + E +L L LAGTAD V+MIEG C+FL++EQM++AIE+G AAV + C
Sbjct:  224 LTLEVGGRQITVETGVIGRQANGAVTVTDGETVLFTTVCAAEEAENVGDFVPLTVNYQERLSAVGRTSGGFFKREGRPRDHEVLTCRLIDRPLRPLMPEGFHHETQVLSWVLSYDGVHSTEPLAITAAGAAMAISDIPLKKPIAGVRVGMMADGRFVVNPTVQEMAESQLDLVLAGTADAVMMIEGYCNFLSDEQMLQAIEMGQAAVSSMC 434
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: W7TFL5_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFL5_9STRA)

HSP 1 Score: 251 bits (641), Expect = 3.110e-76
Identity = 122/211 (57.82%), Postives = 157/211 (74.41%), Query Frame = 1 
Query:   16 KLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            K+ V +G + L FETG+IGR A G+V +  GETV+Y++ACAE     LDF PL++DY ERFSAAGMTSG Y KRDGRASD+EIL++RL+DRPLRPM+ E WT ETQ+L+WV SYDGV  +EP+AI +A+AA+ LS IPL  PVAGV VG   +GR +VNP +  +    L L +AGT +G+LMIEGA +FL EE ++ A+  GHAA+   C
Sbjct:   79 KMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGR-VDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADIC 288
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A2P6TLY3_CHLSO (Polyribonucleotide nucleotidyltransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLY3_CHLSO)

HSP 1 Score: 256 bits (654), Expect = 3.190e-76
Identity = 125/212 (58.96%), Postives = 157/212 (74.06%), Query Frame = 1 
Query:   16 KLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACA-EPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            +L + +G+R +  ETG IGRQA GAV+ TDGET+LY+TACA E S G   F PL+V Y ERFSAAG TSGG+ KR+GR  D E+L+SRL+DRP+RPMI  GWTH TQ+LTWVLSYDG    EPLAIT+A AAL +S +PL++ VAG  VG+     F+VNP     E+  L L +AGT++ VLMIEG CDFLTEEQM++A+  GH A++T C
Sbjct:  101 QLRIPVGDREILLETGEIGRQAGGAVMATDGETILYTTACADEDSSGDGSFAPLQVHYTERFSAAGRTSGGFLKREGRPKDHEVLVSRLIDRPIRPMIQSGWTHSTQVLTWVLSYDGQHSPEPLAITAAGAALAISDVPLSKAVAGARVGLLPGRGFVVNPTVEEQEQSTLDLVIAGTSEAVLMIEGFCDFLTEEQMLEAVRCGHEAIKTMC 312
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A8J9S8_CHLRE (Polyribonucleotide nucleotidyltransferase (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J9S8_CHLRE)

HSP 1 Score: 249 bits (635), Expect = 4.690e-76
Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 1 
Query:   34 GERRLTFETGRIGRQAHGAVLLTDGETVLYSTAC--AEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            G + +  ETG IGRQA+GA++ T GET+LY+TAC  A P+G    F PL V+Y ERFSAAG TSGG+ KRDGR  D E+L+SRL+DRP+RPM A+GW ++TQ+L WVLSYDGV   EPLAIT+AAAAL +S IPL + VAGV VGM A+G FI+NP    +E  RL L +AGT D VLMIEG CDFLTEEQM++A+  G  A+ + C
Sbjct:   93 GGKEIKLETGEIGRQANGAIMATAGETMLYATACCSASPTGDG-SFTPLTVNYAERFSAAGRTSGGFVKRDGRPRDAEVLVSRLVDRPIRPMFAKGWANDTQILEWVLSYDGVNDPEPLAITAAAAALLISDIPLKKAVAGVRVGMSADGGFIINPTVEEMETSRLDLMVAGTRDAVLMIEGFCDFLTEEQMIEALGKGSEAIASLC 298
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BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: I2CR07_NANGC (Polyribonucleotide nucleotidyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=I2CR07_NANGC)

HSP 1 Score: 251 bits (641), Expect = 6.020e-75
Identity = 122/211 (57.82%), Postives = 157/211 (74.41%), Query Frame = 1 
Query:   16 KLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 648
            K+ V +G + L FETG+IGR A G+V +  GETV+Y++ACAE     LDF PL++DY ERFSAAGMTSG Y KRDGRASD+EIL++RL+DRPLRPM+ E WT ETQ+L+WV SYDGV  +EP+AI +A+AA+ LS IPL  PVAGV VG   +GR +VNP +  +    L L +AGT +G+LMIEGA +FL EE ++ A+  GHAA+   C
Sbjct:   79 KMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGR-VDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADIC 288
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGU0_ECTSI1.630e-9068.06Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]
A0A835ZC49_9STRA5.550e-9075.84Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A2K1KFQ2_PHYPA1.850e-7761.79Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A8J4LXC3_9CHLO1.130e-7659.41Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A7R9VJZ5_9CHLO1.680e-7655.66Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A388KJ89_CHABU1.710e-7660.66Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
W7TFL5_9STRA3.110e-7657.82Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A2P6TLY3_CHLSO3.190e-7658.96Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A8J9S8_CHLRE4.690e-7660.39Polyribonucleotide nucleotidyltransferase (Fragmen... [more]
I2CR07_NANGC6.020e-7557.82Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1905contigP-wetherbeei_contig1905:5536..6453 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LGU0
Preferred namePNP1
PFAMsKH_1,PNPase,RNase_PH,RNase_PH_C,S1
Model size648
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K00962
KEGG ReactionR00437,R00438,R00439,R00440
KEGG Pathwayko00230,ko00240,ko03018,map00230,map00240,map03018
KEGG ModuleM00394
Hectar predicted targeting categoryother localisation
GOsGO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006109,GO:0006139,GO:0006396,GO:0006401,GO:0006629,GO:0006720,GO:0006721,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008299,GO:0008408,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009267,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010322,GO:0010323,GO:0010467,GO:0010563,GO:0010565,GO:0010675,GO:0010677,GO:0015994,GO:0015995,GO:0016036,GO:0016070,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016119,GO:0016120,GO:0016122,GO:0016123,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0018130,GO:0019216,GO:0019220,GO:0019222,GO:0019438,GO:0019439,GO:0019747,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031425,GO:0031667,GO:0031668,GO:0031669,GO:0033013,GO:0033014,GO:0033554,GO:0034641,GO:0034655,GO:0042214,GO:0042440,GO:0042594,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045827,GO:0045833,GO:0045912,GO:0045936,GO:0046148,GO:0046246,GO:0046483,GO:0046700,GO:0046890,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051055,GO:0051174,GO:0051186,GO:0051188,GO:0051716,GO:0062012,GO:0062014,GO:0065007,GO:0071071,GO:0071072,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903725,GO:1903726
Exons2
Evalue2.68e-91
EggNOG OGsCOG1185@1|root,KOG1067@2759|Eukaryota
EC2.7.7.8
Descriptionpolyribonucleotide nucleotidyltransferase activity
Cds size648
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186162.647544-CDS-P-wetherbeei_contig1905:5535..60831683186162.647544-CDS-P-wetherbeei_contig1905:5535..6083Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1905 5536..6083 +
1683186162.6605997-CDS-P-wetherbeei_contig1905:6353..64531683186162.6605997-CDS-P-wetherbeei_contig1905:6353..6453Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1905 6354..6453 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1905.4.1prot_P-wetherbeei_contig1905.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1905 5536..6453 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1905.4.1

>prot_P-wetherbeei_contig1905.4.1 ID=prot_P-wetherbeei_contig1905.4.1|Name=mRNA_P-wetherbeei_contig1905.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp
EDGVSKLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSG
GPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRP
MIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAG
VTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQ
MMKAIEVGHAAVRTQC
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mRNA from alignment at P-wetherbeei_contig1905:5536..6453+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1905.4.1 ID=mRNA_P-wetherbeei_contig1905.4.1|Name=mRNA_P-wetherbeei_contig1905.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=918bp|location=Sequence derived from alignment at P-wetherbeei_contig1905:5536..6453+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGACGGCGTCAGCAAACTGGTCGTCCGGCTCGGAGAAAGACGATTGAC
CTTTGAGACTGGTCGCATTGGACGGCAGGCGCACGGTGCTGTCTTGCTGA
CCGACGGAGAAACTGTGTTGTACAGCACGGCGTGCGCAGAGCCCTCCGGC
GGCCCGCTCGACTTCGTGCCCCTCAAAGTGGATTATATGGAACGTTTCAG
TGCGGCGGGGATGACCAGCGGGGGTTACAACAAGCGCGACGGCCGCGCCA
GCGACAAGGAGATTCTCATCTCGCGCCTCATGGACCGGCCCCTGCGGCCC
ATGATCGCCGAGGGCTGGACGCACGAGACGCAGCTGCTGACGTGGGTGCT
CTCCTACGATGGCGTCCGCCAGACAGAGCCGCTGGCCATCACTTCTGCCG
CGGCGGCGCTCTGCCTGAGCCACATACCTCTGACACGGCCGGTGGCGGGC
GTGACGGTCGGGATGGACGCCGAAGGCCGCTTCATCGTCAACCCGGACCG
CCTGGTTCTCGAGGAAGGGAGGCTCACGCTGACGCTTGCCGGGACAGCGT
GAGTTTCGATTGAGGGATGGAGGAAGCGCGTGCCAGCCAGTGGCCGCCTG
CCGCCTTTGCTCTTTTCCCCCAATTCCGTCGCCCGTTTCTTTCTTTCCCG
GGACGTTCTCTCTTGTTAATTGCTCTGCCGCGGCCGATGCGCGTGAAAAG
CAGCCATTTGGGAGTTTGACAGGAGGGACAACTCACGCTAGGCAAAAGAT
TTGCGTTTGTAAGTTCTTCCTTTCTCTTCTACCTTATCCACGGCCGTTAT
CGTTCGCACCAAGTGCAGCGACGGCGTGCTGATGATCGAAGGGGCGTGCG
ACTTCCTGACAGAGGAGCAGATGATGAAGGCGATTGAGGTGGGCCACGCC
GCCGTGCGGACGCAGTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1905:5536..6453+

>mRNA_P-wetherbeei_contig1905.4.1 ID=mRNA_P-wetherbeei_contig1905.4.1|Name=mRNA_P-wetherbeei_contig1905.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig1905:5536..6453+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGACGGCGTCAGCAAACTGGTCGTCCGGCTCGGAGAAAGACGATTGAC
CTTTGAGACTGGTCGCATTGGACGGCAGGCGCACGGTGCTGTCTTGCTGA
CCGACGGAGAAACTGTGTTGTACAGCACGGCGTGCGCAGAGCCCTCCGGC
GGCCCGCTCGACTTCGTGCCCCTCAAAGTGGATTATATGGAACGTTTCAG
TGCGGCGGGGATGACCAGCGGGGGTTACAACAAGCGCGACGGCCGCGCCA
GCGACAAGGAGATTCTCATCTCGCGCCTCATGGACCGGCCCCTGCGGCCC
ATGATCGCCGAGGGCTGGACGCACGAGACGCAGCTGCTGACGTGGGTGCT
CTCCTACGATGGCGTCCGCCAGACAGAGCCGCTGGCCATCACTTCTGCCG
CGGCGGCGCTCTGCCTGAGCCACATACCTCTGACACGGCCGGTGGCGGGC
GTGACGGTCGGGATGGACGCCGAAGGCCGCTTCATCGTCAACCCGGACCG
CCTGGTTCTCGAGGAAGGGAGGCTCACGCTGACGCTTGCCGGGACAGCCG
ACGGCGTGCTGATGATCGAAGGGGCGTGCGACTTCCTGACAGAGGAGCAG
ATGATGAAGGCGATTGAGGTGGGCCACGCCGCCGTGCGGACGCAGTGC
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