prot_P-wetherbeei_contig1905.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1905.4.1
Unique Nameprot_P-wetherbeei_contig1905.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length216
Homology
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: D8LGU0_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU0_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 1.630e-90
Identity = 147/216 (68.06%), Postives = 170/216 (78.70%), Query Frame = 0
Query:    1 EDGVSKLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            E GVS L V +G R L+FETG++GRQA GAV+  DGETV+YSTAC +      +F PL+VDYMERFSAAGMTSGGYNKRDGRASDKE L+SRLMDRPLRP +  GW HETQLL+WVLSYD V    PLAIT+A+AAL LS++PL R +AGVTVGMD+EG  +VNP+  V     L LT+AGTADGVLMIEG  DF+ EE MM+AIEVGHAAVR  C
Sbjct:   20 EGGVSVLRVTVGGRDLSFETGKVGRQASGAVMARDGETVVYSTACTDRKTTTSNFSPLRVDYMERFSAAGMTSGGYNKRDGRASDKETLVSRLMDRPLRPAMHPGWFHETQLLSWVLSYDTVHPPVPLAITAASAALALSNVPLVRAIAGVTVGMDSEGELVVNPEISVAAMSPLNLTIAGTADGVLMIEGESDFVCEEDMMRAIEVGHAAVRDLC 235          
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A835ZC49_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC49_9STRA)

HSP 1 Score: 288 bits (738), Expect = 5.550e-90
Identity = 135/178 (75.84%), Postives = 158/178 (88.76%), Query Frame = 0
Query:   39 VLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            +LY+TACA+ S G LDF PLKVDY ERFS+AGMTSGGYNKRDGRAS+KE+L+SRL+DRPLRPMIA+GWTHETQL+TWV+SYDG R  EPLAITSA+A+LCLS +P+ R VAGVTVGMD EG ++VNPD+ + +E RLTL+LAGTA+GVLMIEGACDFLTEEQM+ AIE GHAAVR  C
Sbjct:    1 MLYTTACADSSAGLLDFAPLKVDYQERFSSAGMTSGGYNKRDGRASEKEVLVSRLIDRPLRPMIAQGWTHETQLITWVVSYDGSRPPEPLAITSASASLCLSQVPMRRAVAGVTVGMDGEGNYVVNPDKAIADESRLTLSLAGTAEGVLMIEGACDFLTEEQMVSAIEAGHAAVREIC 178          
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A2K1KFQ2_PHYPA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KFQ2_PHYPA)

HSP 1 Score: 258 bits (659), Expect = 1.850e-77
Identity = 131/212 (61.79%), Postives = 160/212 (75.47%), Query Frame = 0
Query:    7 LVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACA--EPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            + + +G R +  ETG IGRQA+GAV +TDGETVLY+T C+  +PS  P DFVPL V Y ERFSAAG TSGG+ KR+GR  D E+L+ RL+DRP+RPMIA G+ +ETQ+L WVLSYDGV   +PLAITSA AAL +S IP+++PVAGV VG+   G FIVNP    +E   L L +AGTAD  LMIEG CDFLTEE++MKA+EVGH AVR  C
Sbjct:   98 VTIPVGNREIVVETGLIGRQANGAVTVTDGETVLYTTVCSSSDPSE-PSDFVPLSVQYQERFSAAGRTSGGFVKREGRVRDHEVLVCRLIDRPIRPMIAHGFHYETQVLVWVLSYDGVHSPDPLAITSAGAALAVSDIPMSKPVAGVRVGL-VNGEFIVNPTVGEMENSTLDLVIAGTADATLMIEGYCDFLTEEELMKAVEVGHDAVRAIC 307          
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A8J4LXC3_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LXC3_9CHLO)

HSP 1 Score: 248 bits (632), Expect = 1.130e-76
Identity = 120/202 (59.41%), Postives = 154/202 (76.24%), Query Frame = 0
Query:   16 LTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSG-GPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            +T ETG IGRQA+GA++ T GET++Y+TAC  PS  G   F+PL V+Y ERFSAAG TSGG+ KRDGR  D E+L+SRL+DRPLRPM A+GW +ETQ+L WVLSYDG+ + EP+AIT+AAAAL +S IPL + VAGV VG+   G F++NP    ++  RL L +AGT D +LMIEG CDFLTEEQM++A+ VG  A+ + C
Sbjct:   99 ITLETGEIGRQANGAIMATCGETMIYATACCSPSPTGDGSFLPLTVNYAERFSAAGRTSGGFIKRDGRPRDAEVLVSRLVDRPLRPMFAKGWANETQVLEWVLSYDGINEPEPIAITAAAAALLISDIPLEKAVAGVRVGLLPGGEFVINPTLEQMKASRLDLMVAGTRDAILMIEGFCDFLTEEQMIEALAVGSKAITSLC 300          
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A7R9VJZ5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VJZ5_9CHLO)

HSP 1 Score: 244 bits (622), Expect = 1.680e-76
Identity = 118/212 (55.66%), Postives = 153/212 (72.17%), Query Frame = 0
Query:    6 KLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDA-EGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            ++ + +G   +  ETG IGRQA+GA++ + GET++Y+TAC   S G   FVPL V+Y ERFSAAG T+GGY KRDGR  D ++L+SRL+DRP+RPM  +GW  ETQ+L WV+SYDGV   EPLAIT+AAAAL +S IP  + VAGV VG  A + R ++NP     +   L L +AGT D +LMIEG CDFLTEEQM++A+E GHAAV + C
Sbjct:   45 RVTLPVGNTEIVLETGEIGRQANGAIMASCGETMVYATACCGGSAGDGSFVPLTVNYSERFSAAGRTAGGYIKRDGRTKDSDVLVSRLVDRPIRPMFKKGWASETQVLEWVMSYDGVNCPEPLAITAAAAALLVSDIPFEKAVAGVRVGYIAKDDRIVINPSMQEQQRSALDLMVAGTRDAILMIEGFCDFLTEEQMLRAVEAGHAAVSSMC 256          
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A388KJ89_CHABU (Polyribonucleotide nucleotidyltransferase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJ89_CHABU)

HSP 1 Score: 258 bits (660), Expect = 1.710e-76
Identity = 128/211 (60.66%), Postives = 164/211 (77.73%), Query Frame = 0
Query:    7 LVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACA-EPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            L + +G R++T ETG IGRQA+GAV +TDGETVL++T CA E +    DFVPL V+Y ER SA G TSGG+ KR+GR  D E+L  RL+DRPLRP++ EG+ HETQ+L+WVLSYDGV  TEPLAIT+A AA+ +S IPL +P+AGV VGM A+GRF+VNP    + E +L L LAGTAD V+MIEG C+FL++EQM++AIE+G AAV + C
Sbjct:  224 LTLEVGGRQITVETGVIGRQANGAVTVTDGETVLFTTVCAAEEAENVGDFVPLTVNYQERLSAVGRTSGGFFKREGRPRDHEVLTCRLIDRPLRPLMPEGFHHETQVLSWVLSYDGVHSTEPLAITAAGAAMAISDIPLKKPIAGVRVGMMADGRFVVNPTVQEMAESQLDLVLAGTADAVMMIEGYCNFLSDEQMLQAIEMGQAAVSSMC 434          
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: W7TFL5_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFL5_9STRA)

HSP 1 Score: 251 bits (641), Expect = 3.110e-76
Identity = 122/211 (57.82%), Postives = 157/211 (74.41%), Query Frame = 0
Query:    6 KLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            K+ V +G + L FETG+IGR A G+V +  GETV+Y++ACAE     LDF PL++DY ERFSAAGMTSG Y KRDGRASD+EIL++RL+DRPLRPM+ E WT ETQ+L+WV SYDGV  +EP+AI +A+AA+ LS IPL  PVAGV VG   +GR +VNP +  +    L L +AGT +G+LMIEGA +FL EE ++ A+  GHAA+   C
Sbjct:   79 KMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGR-VDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADIC 288          
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A0A2P6TLY3_CHLSO (Polyribonucleotide nucleotidyltransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLY3_CHLSO)

HSP 1 Score: 256 bits (654), Expect = 3.190e-76
Identity = 125/212 (58.96%), Postives = 157/212 (74.06%), Query Frame = 0
Query:    6 KLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACA-EPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            +L + +G+R +  ETG IGRQA GAV+ TDGET+LY+TACA E S G   F PL+V Y ERFSAAG TSGG+ KR+GR  D E+L+SRL+DRP+RPMI  GWTH TQ+LTWVLSYDG    EPLAIT+A AAL +S +PL++ VAG  VG+     F+VNP     E+  L L +AGT++ VLMIEG CDFLTEEQM++A+  GH A++T C
Sbjct:  101 QLRIPVGDREILLETGEIGRQAGGAVMATDGETILYTTACADEDSSGDGSFAPLQVHYTERFSAAGRTSGGFLKREGRPKDHEVLVSRLIDRPIRPMIQSGWTHSTQVLTWVLSYDGQHSPEPLAITAAGAALAISDVPLSKAVAGARVGLLPGRGFVVNPTVEEQEQSTLDLVIAGTSEAVLMIEGFCDFLTEEQMLEAVRCGHEAIKTMC 312          
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: A8J9S8_CHLRE (Polyribonucleotide nucleotidyltransferase (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J9S8_CHLRE)

HSP 1 Score: 249 bits (635), Expect = 4.690e-76
Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 0
Query:   12 GERRLTFETGRIGRQAHGAVLLTDGETVLYSTAC--AEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            G + +  ETG IGRQA+GA++ T GET+LY+TAC  A P+G    F PL V+Y ERFSAAG TSGG+ KRDGR  D E+L+SRL+DRP+RPM A+GW ++TQ+L WVLSYDGV   EPLAIT+AAAAL +S IPL + VAGV VGM A+G FI+NP    +E  RL L +AGT D VLMIEG CDFLTEEQM++A+  G  A+ + C
Sbjct:   93 GGKEIKLETGEIGRQANGAIMATAGETMLYATACCSASPTGDG-SFTPLTVNYAERFSAAGRTSGGFVKRDGRPRDAEVLVSRLVDRPIRPMFAKGWANDTQILEWVLSYDGVNDPEPLAITAAAAALLISDIPLKKAVAGVRVGMSADGGFIINPTVEEMETSRLDLMVAGTRDAVLMIEGFCDFLTEEQMIEALGKGSEAIASLC 298          
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Match: I2CR07_NANGC (Polyribonucleotide nucleotidyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=I2CR07_NANGC)

HSP 1 Score: 251 bits (641), Expect = 6.020e-75
Identity = 122/211 (57.82%), Postives = 157/211 (74.41%), Query Frame = 0
Query:    6 KLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSGGPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRPMIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAGVTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQMMKAIEVGHAAVRTQC 216
            K+ V +G + L FETG+IGR A G+V +  GETV+Y++ACAE     LDF PL++DY ERFSAAGMTSG Y KRDGRASD+EIL++RL+DRPLRPM+ E WT ETQ+L+WV SYDGV  +EP+AI +A+AA+ LS IPL  PVAGV VG   +GR +VNP +  +    L L +AGT +G+LMIEGA +FL EE ++ A+  GHAA+   C
Sbjct:   79 KMEVEVGGKILAFETGKIGRSADGSVTVRQGETVVYASACAENKPQELDFTPLRIDYFERFSAAGMTSGSYTKRDGRASDREILVARLIDRPLRPMLTEAWTCETQVLSWVFSYDGVHNSEPMAICAASAAVVLSSIPLETPVAGVQVGR-VDGRLVVNPTKQEMANSTLNLMVAGTEEGILMIEGAAEFLPEEVLLDALREGHAAIADIC 288          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1905.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGU0_ECTSI1.630e-9068.06Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]
A0A835ZC49_9STRA5.550e-9075.84Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A2K1KFQ2_PHYPA1.850e-7761.79Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A8J4LXC3_9CHLO1.130e-7659.41Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A7R9VJZ5_9CHLO1.680e-7655.66Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A388KJ89_CHABU1.710e-7660.66Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
W7TFL5_9STRA3.110e-7657.82Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A2P6TLY3_CHLSO3.190e-7658.96Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A8J9S8_CHLRE4.690e-7660.39Polyribonucleotide nucleotidyltransferase (Fragmen... [more]
I2CR07_NANGC6.020e-7557.82Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 147..210
e-value: 1.3E-11
score: 44.3
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 3..216
e-value: 2.0E-60
score: 206.1
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 14..143
e-value: 1.8E-12
score: 47.9
NoneNo IPR availablePANTHERPTHR11252:SF12POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, CHLOROPLASTICcoord: 9..216
IPR012162Polyribonucleotide nucleotidyltransferasePANTHERPTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEcoord: 9..216
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 146..214
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 9..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1905contigP-wetherbeei_contig1905:5536..6453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1905.4.1mRNA_P-wetherbeei_contig1905.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1905 5536..6453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1905.4.1 ID=prot_P-wetherbeei_contig1905.4.1|Name=mRNA_P-wetherbeei_contig1905.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp
EDGVSKLVVRLGERRLTFETGRIGRQAHGAVLLTDGETVLYSTACAEPSG
GPLDFVPLKVDYMERFSAAGMTSGGYNKRDGRASDKEILISRLMDRPLRP
MIAEGWTHETQLLTWVLSYDGVRQTEPLAITSAAAALCLSHIPLTRPVAG
VTVGMDAEGRFIVNPDRLVLEEGRLTLTLAGTADGVLMIEGACDFLTEEQ
MMKAIEVGHAAVRTQC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015847ExoRNase_PH_dom2
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR012162PNPase
IPR036345ExoRNase_PH_dom2_sf
IPR020568Ribosomal_S5_D2-typ_fold