mRNA_P-wetherbeei_contig1886.4.6 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1886.4.6
Unique NamemRNA_P-wetherbeei_contig1886.4.6
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: D8LEZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ9_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.860e-66
Identity = 144/276 (52.17%), Postives = 177/276 (64.13%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTY---------GVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGA-------AESAMAASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPGQG-LDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRDF 777
            QV+ELLSAFGPLKSFHLVRD GSPTSKGY FCEY++  +T +AC+GL+GM LGDKTLTVR A    S+G                     G+ +GG G  MG  A     PT +EQ QLA AMAAL            P    A MA+   GGA       AESA+AA+  + + PTR+LV+L+MVT  EL    EYEDIVDDIQ ECS+HGT+L+++VPRPG+      VGKVF+EY  ++ A++AALSLAGRQF   IVKVEY +E KF+ R+F
Sbjct:  376 QVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGXXXXXXXXXXXXXXXXXXXMPGMQMGG-GQQMGLTA----PPTQQEQMQLAQAMAALD-----------PNASQAAMASLAQGGAGAVPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGEADASRAVGKVFVEYDTKDSAQKAALSLAGRQFGANIVKVEYLNEEKFARREF 635          
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: A0A835ZGN1_9STRA (Splicing factor U2AF subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN1_9STRA)

HSP 1 Score: 183 bits (465), Expect = 3.320e-52
Identity = 112/258 (43.41%), Postives = 150/258 (58.14%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGAAESAMAASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPGQGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRD 774
            QVKELLSAFG LK+ HLV+D+G+  SKGYAFCEY DP +T +AC+GLNGM LGDKTLTVR  +                                   GH  +V     LA AMAAL   A   V                     ESA AA+  +T+ PTR+LVL++MV  E+L  D EY DI++D+++EC  +G +  +++PRPG+     VGKVF+EY + + A+ AA++LAGRQFA +IVK +Y DE++F+ RD
Sbjct:  190 QVKELLSAFGALKALHLVKDAGATNSKGYAFCEYQDPAVTSIACEGLNGMALGDKTLTVRKVR-----------------------------------GHALSVAAL-MLAQAMAALDPTAHKAV--------------------TESAEAATVVRTMAPTRVLVLMNMVGEEDLKDDQEYTDILEDVRDECKQYGELKTVIIPRPGE---TGVGKVFLEYAEVQQAQAAAMALAGRQFASKIVKAQYHDESRFAARD 388          
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: A0A8K1C271_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C271_PYTOL)

HSP 1 Score: 178 bits (452), Expect = 8.010e-49
Identity = 115/260 (44.23%), Postives = 147/260 (56.54%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGAAESAMAASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPGQGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRDFT 780
            QVKELL AFGPLKSFHLV++  +  SKGY FCEY+DP++T  AC GLN M+LGDKTLTVR A   ++A   A           A G V  G+      G  PT           AAL   + AG G+ +P       +APL                  P+R++VLL+MVT +EL  D EY DI+DDI+ EC   G +L+LV+PRP  G    VGKVF+E+ D   A+ A+  L GR FA R V VE+ DE K++ RDF+
Sbjct:  347 QVKELLQAFGPLKSFHLVKELNTNMSKGYGFCEYLDPNVTDAACIGLNDMKLGDKTLTVRRAMSQENAKAVAS----------AAGSVNSGLS----MGLDPTT----------AALQTISMAGFGLGIP-------SAPLG----------------NPSRVIVLLNMVTADELEDDEEYNDILDDIKTECERFGPVLSLVIPRPRDGYHTAVGKVFVEFADIASAQGASQELHGRGFANRTVSVEFMDEQKYARRDFS 559          
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: A0A5D6XX73_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX73_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.710e-47
Identity = 114/259 (44.02%), Postives = 144/259 (55.60%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGAAESAMAASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPGQGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRDF 777
            Q+KELL AFGPL+SFHLV++  S  SKGY FCEY+DP+ T  AC GLN M+LGDKTLTVR A  P+       T  AA          GGG     GS   P    +    AA+ AL                MA + AP     A             P+R++VLL+MVT EEL  + EY DIVDDI++EC   G ++++V+PRP  G  + VGKVF+EY     A+ AA  L GR F+ RIV VEY DE K++ R+F
Sbjct:  406 QIKELLQAFGPLRSFHLVKELSSNMSKGYGFCEYLDPNSTDAACLGLNEMKLGDKTLTVRRAMTPE------YTSKAA----------GGG-----GSSSHPNPGMELASQAALQALS---------------MAGLGAPSGPSGA-------------PSRVVVLLNMVTPEELDDEDEYADIVDDIKSECERFGRVISIVLPRPRDGFYSAVGKVFVEYDAVPSAQAAAAELHGRGFSNRIVAVEYMDEHKYARREF 615          
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: K3WB93_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB93_GLOUD)

HSP 1 Score: 169 bits (429), Expect = 2.990e-45
Identity = 116/260 (44.62%), Postives = 143/260 (55.00%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGAAESAMAASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPGQGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRDFT 780
            QVKELL AFGPLKSFHLV++  S  SKGY FCEY+D ++T  AC GLN M+LGDKTLTVR A   ++A   A           A G V  G+              +  L  + AAL     AG G    IP M     PL                  PTR++VLL+MVT EEL  + EY DIVDDI+ EC   G + ++V+PRP  G  + VGKVF+EY D   A+ AA  L GR F+ R V VEY DE K++ RDF+
Sbjct:  391 QVKELLQAFGPLKSFHLVKELNSNLSKGYGFCEYVDINVTDSACLGLNDMKLGDKTLTVRRAMSQENAKAVAS----------AAGTVNSGL--------------EMGLNPSHAALQAMNLAGFG----IPSM-----PLG----------------TPTRVIVLLNMVTPEELEDEEEYADIVDDIKGECERFGRVNSIVLPRPRDGFYSAVGKVFVEYGDVPSAQAAAAELHGRGFSNRTVAVEYMDEHKYARRDFS 601          
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: A0A1W0ABZ7_9STRA (Splicing factor U2AF subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABZ7_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.870e-44
Identity = 110/261 (42.15%), Postives = 139/261 (53.26%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGAAESAMAASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPG--QGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRDF 777
            QVKELL AFGPLKSFHLV++  +  SKGY FCEY+DPD+TQ AC GLN MQ+GDKTLTVR A    +AG     DM                  + G     T     Q A +   L             +P + P+   L    A             P+RI+VLL+MVT E+L  D EY DI DDI+ EC   G I +++VPRPG  Q   + VGK+F+E+ +  HA+ A+  L GR FA R V VE+  E KF  R+F
Sbjct:  322 QVKELLQAFGPLKSFHLVKELNTNLSKGYGFCEYMDPDITQTACAGLNDMQIGDKTLTVRTAL---TAGGLYPPDMH-----------------LMGPNQPVTTTTMMQAATSSNPL-------------LPNVDPILQQLQKHQAMPLQIVPSVPLGAPSRIIVLLNMVTPEDLVDDEEYNDICDDIRAECEKSGPIKSMIVPRPGERQYQSSSVGKIFVEFAEIAHAQHASNELHGRGFANRTVAVEFMAEDKFLRREF 549          
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: A0A067C227_SAPPC (Splicing factor U2AF subunit n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C227_SAPPC)

HSP 1 Score: 160 bits (404), Expect = 2.530e-43
Identity = 108/270 (40.00%), Postives = 142/270 (52.59%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGAAESAMAASRAQTLE---------PTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPG--QGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRDF 777
            QVKELL AFG LKSFHLV++  +  SKGY FCEY+DP++TQVAC GLN MQ+GDKTLTVR A    + GL+                            H P  +           LG P      M+       P+   L        +   +A  L+         P+RI+VLL+MVT ++L  + EY+DI DDI+ EC   G I ++VVPRPG  Q   A VGK+F+E+ +  HA+ A+  L GR FA R V VE+  E KF+ R+F
Sbjct:  144 QVKELLQAFGALKSFHLVKELNTNLSKGYGFCEYMDPEVTQVACAGLNDMQIGDKTLTVRTALT--AGGLYPPDHP-----------------------HAPPQQ-----------LGNPGVTTTTMMQAATSSNPLL--LNVDPILQQLQKHQAMPLQIVPSVPLGAPSRIIVLLNMVTPDDLTDNDEYQDICDDIRAECEKSGPIRSMVVPRPGETQYQTASVGKIFVEFGEVVHAQHASNELHGRGFANRTVAVEFMSETKFARREF 375          
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: A0A6A3P0N3_9STRA (Splicing factor U2AF subunit n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P0N3_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.810e-42
Identity = 106/258 (41.09%), Postives = 142/258 (55.04%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGAAESAMAASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPGQGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRD 774
            QVKELL AFGPL+SFHLV++  S  SKGY FCEY+D ++T  AC GLN M+LGDKTLTVR A   ++A   A                         +G V T  E   L  + AAL   + AG+  L       P+ A                    P+R++VLL+MVT EEL  + EY DI+DDI+ EC   G + +L++PRP  G+ + VGKVF+E+ D + A+ AA  L GR F+ R V VE+ DE K++ R+
Sbjct:  380 QVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQENAKAVASA-----------------------AGTVNTGLEMG-LDPSRAALQAMSLAGIPSL-------PLGA--------------------PSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPSAVGKVFVEFGDVQSAQNAATELHGRGFSNRTVIVEFMDEGKYARRE 586          
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: D0MXQ4_PHYIT (Splicing factor U2AF subunit n=3 Tax=Phytophthora TaxID=4783 RepID=D0MXQ4_PHYIT)

HSP 1 Score: 161 bits (408), Expect = 1.990e-42
Identity = 103/260 (39.62%), Postives = 140/260 (53.85%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGAAESAMAASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPGQGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRDFT 780
            QVKELL AFGPL+SFHLV++  S  SKGY FCEY+D ++T  AC GLN MQLGDKTLTVR A   ++A                                            A+A+  G    G+ M +  P +A M A    G     +         P+R++VLL+MVT EEL  + EY DI+DDI+ EC   G + +L++PRP  G+ + VGKVF+E+ D + A+ AA  L GR F+ R V VE+ DE K++ R+ +
Sbjct:  361 QVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACIGLNDMQLGDKTLTVRRAMSQENA-------------------------------------------KAVASAAGTVNTGLEMGLD-PSLAAMQAMSMAGIPSVPLGT-------PSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGVLSAVGKVFVEFADVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARREIS 569          
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Match: A0A484DRL9_BRELC (Splicing factor U2AF subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRL9_BRELC)

HSP 1 Score: 160 bits (405), Expect = 4.380e-42
Identity = 107/261 (41.00%), Postives = 141/261 (54.02%), Query Frame = 1
Query:    1 QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGMQLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGHVPTVEEQAQLAAAMAALGGPAAAGVGMLMPI-PGMAPMAAPLTGGAAESAMAASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILALVVPRPGQGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGDEAKFSNRDFT 780
            QVKELL AFGPL+SFHLV++  S  SKGY FCEY+D  +T  AC GLN M+LGDKTLTVR A   ++A   AV + A                     G+V T                      G+ M + P  A M A    G     +         PTR++VLL+MVT +EL  D EY DIVDDI+ EC   G +++L++PRP  G+ + VGKVFIE++D   A+ AA  L GR F+ RIV VE+  E  ++ R+ +
Sbjct:  346 QVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYLDVSVTDAACMGLNDMRLGDKTLTVRRAMSQENA--KAVANAA---------------------GNVNT----------------------GLEMGLDPSQAAMQAMTLAGITGVPLGV-------PTRVIVLLNMVTRDELEDDDEYADIVDDIKGECERFGRVVSLLLPRPRDGILSAVGKVFIEFQDVASAQGAATELHGRGFSNRIVSVEFMPEELYARREIS 554          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1886.4.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ9_ECTSI1.860e-6652.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZGN1_9STRA3.320e-5243.41Splicing factor U2AF subunit n=1 Tax=Tribonema min... [more]
A0A8K1C271_PYTOL8.010e-4944.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XX73_9STRA9.710e-4744.02Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WB93_GLOUD2.990e-4544.62Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1W0ABZ7_9STRA2.870e-4442.15Splicing factor U2AF subunit n=1 Tax=Thraustotheca... [more]
A0A067C227_SAPPC2.530e-4340.00Splicing factor U2AF subunit n=1 Tax=Saprolegnia p... [more]
A0A6A3P0N3_9STRA1.810e-4241.09Splicing factor U2AF subunit n=8 Tax=Phytophthora ... [more]
D0MXQ4_PHYIT1.990e-4239.62Splicing factor U2AF subunit n=3 Tax=Phytophthora ... [more]
A0A484DRL9_BRELC4.380e-4241.00Splicing factor U2AF subunit n=1 Tax=Bremia lactuc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1886contigP-wetherbeei_contig1886:5029..6376 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LEZ9
PFAMsRRM_1
Model size783
Max annot lvl2759|Eukaryota
KEGG koko:K12837
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.05e-67
EggNOG OGsKOG0120@1|root,KOG0120@2759|Eukaryota
Descriptionpre-mRNA 3'-splice site binding
Cds size783
COG categoryJ
BRITEko00000,ko00001,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186157.1277962-CDS-P-wetherbeei_contig1886:5028..52651683186157.1277962-CDS-P-wetherbeei_contig1886:5028..5265Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1886 5029..5265 -
1683186157.138508-CDS-P-wetherbeei_contig1886:5576..59161683186157.138508-CDS-P-wetherbeei_contig1886:5576..5916Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1886 5577..5916 -
1683186157.1474419-CDS-P-wetherbeei_contig1886:6170..63761683186157.1474419-CDS-P-wetherbeei_contig1886:6170..6376Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1886 6171..6376 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1886.4.6prot_P-wetherbeei_contig1886.4.6Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1886 5029..6376 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1886.4.6

>prot_P-wetherbeei_contig1886.4.6 ID=prot_P-wetherbeei_contig1886.4.6|Name=mRNA_P-wetherbeei_contig1886.4.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
QVKELLSAFGPLKSFHLVRDSGSPTSKGYAFCEYIDPDMTQVACDGLNGM
QLGDKTLTVRVAQVPDSAGLFAVTDMAAQTYGVAVGGVGGGMGGIAGSGH
VPTVEEQAQLAAAMAALGGPAAAGVGMLMPIPGMAPMAAPLTGGAAESAM
AASRAQTLEPTRILVLLDMVTGEELAIDSEYEDIVDDIQNECSTHGTILA
LVVPRPGQGLDAVVGKVFIEYRDREHARQAALSLAGRQFAERIVKVEYGD
EAKFSNRDFT*
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mRNA from alignment at P-wetherbeei_contig1886:5029..6376-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1886.4.6 ID=mRNA_P-wetherbeei_contig1886.4.6|Name=mRNA_P-wetherbeei_contig1886.4.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1348bp|location=Sequence derived from alignment at P-wetherbeei_contig1886:5029..6376- (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGAAGGAGCTGCTGTCGGCGTTTGGCCCGCTGAAGTCATTCCACCT GGTGCGTGACTCGGGGTCGCCGACTTCGAAGGGCTACGCCTTCTGCGAGT ATATCGACCCCGACATGACCCAGGTGGCCTGCGACGGCCTCAACGGCATG CAGCTCGGCGATAAGACACTCACCGTGCGCGTCGCCCAGGTGCCCGACAG CGCCGGGTGAGTGGTGGTAATGCAGGCAGAGCTTTTGATGGTCTGAAAGC GGCGGCTTGCTTTGCACCGGAGGCTCTGGCGTGTTAAAGCGGATTTTTCC CCTGTCGCGGCGTCTTCCACCATTTTGAACCTGTGATGCTTTAGTCACTT GCGGGGTTTTCGTCTAGACATATTGGCGCCGGTGGATGTTACTCACACGG TTCTCCTTATTCCCCGGCTTCCCGCCGCCTTCTCTTGTCGTGTTCTTCCC AAACCCACAGCCTGTTCGCCGTGACCGACATGGCCGCACAAACGTACGGT GTTGCCGTCGGCGGCGTCGGCGGCGGGATGGGCGGCATCGCCGGTTCGGG ACATGTCCCGACGGTGGAGGAGCAGGCGCAGCTCGCGGCCGCCATGGCGG CCCTGGGGGGCCCGGCGGCCGCGGGCGTGGGCATGCTCATGCCGATACCG GGAATGGCGCCAATGGCAGCGCCGCTGACGGGTGGGGCGGCGGAGTCAGC GATGGCAGCGAGCCGGGCGCAGACGCTAGAGCCGACGCGGATTCTGGTGC TGCTCGACATGGTGACTGGGGAGGAGCTCGCCATCGACAGCGAATACGAG GTGAGTGACTCTATGTTTACCACGCTGCGGCGACTAAGCGAATGATCCTA TTCCACGCGGCCGCATGCGTCTGCTCTGATCAGCAAGGAAATGAGCGTTC ACCCTTCAAGGATGTAACCAGAGTGGTGTTCGCCCATTTTACCCAAAAAA GTATTCTGTGACATCATGTTCCAGAACTGCCTTTCTCATCAGACCCGGTG CCGCCCACGCGGCACTGCTATCTTGATTTGAATGGAAAGAAAGGTCGATC GTTTCCTTGCTGACCAACCCCCTCAACACACGACCACCACATCTTCCAAA AACAAAAACAGGACATCGTGGACGACATTCAGAACGAGTGCTCGACCCAC GGCACCATCCTCGCCCTGGTGGTGCCGCGGCCCGGGCAGGGCCTCGACGC CGTCGTCGGCAAGGTCTTCATCGAGTACCGCGACCGCGAGCACGCCCGAC AGGCGGCGCTGTCGCTGGCCGGCCGGCAATTCGCCGAGCGCATCGTCAAG GTGGAGTACGGCGACGAAGCCAAGTTTTCCAACCGCGACTTCACCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1886:5029..6376-

>mRNA_P-wetherbeei_contig1886.4.6 ID=mRNA_P-wetherbeei_contig1886.4.6|Name=mRNA_P-wetherbeei_contig1886.4.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig1886:5029..6376- (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGAAGGAGCTGCTGTCGGCGTTTGGCCCGCTGAAGTCATTCCACCT
GGTGCGTGACTCGGGGTCGCCGACTTCGAAGGGCTACGCCTTCTGCGAGT
ATATCGACCCCGACATGACCCAGGTGGCCTGCGACGGCCTCAACGGCATG
CAGCTCGGCGATAAGACACTCACCGTGCGCGTCGCCCAGGTGCCCGACAG
CGCCGGCCTGTTCGCCGTGACCGACATGGCCGCACAAACGTACGGTGTTG
CCGTCGGCGGCGTCGGCGGCGGGATGGGCGGCATCGCCGGTTCGGGACAT
GTCCCGACGGTGGAGGAGCAGGCGCAGCTCGCGGCCGCCATGGCGGCCCT
GGGGGGCCCGGCGGCCGCGGGCGTGGGCATGCTCATGCCGATACCGGGAA
TGGCGCCAATGGCAGCGCCGCTGACGGGTGGGGCGGCGGAGTCAGCGATG
GCAGCGAGCCGGGCGCAGACGCTAGAGCCGACGCGGATTCTGGTGCTGCT
CGACATGGTGACTGGGGAGGAGCTCGCCATCGACAGCGAATACGAGGACA
TCGTGGACGACATTCAGAACGAGTGCTCGACCCACGGCACCATCCTCGCC
CTGGTGGTGCCGCGGCCCGGGCAGGGCCTCGACGCCGTCGTCGGCAAGGT
CTTCATCGAGTACCGCGACCGCGAGCACGCCCGACAGGCGGCGCTGTCGC
TGGCCGGCCGGCAATTCGCCGAGCGCATCGTCAAGGTGGAGTACGGCGAC
GAAGCCAAGTTTTCCAACCGCGACTTCACCTGA
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