mRNA_P-wetherbeei_contig1836.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: A0A6H5JSZ6_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ6_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.290e-91 Identity = 150/259 (57.92%), Postives = 184/259 (71.04%), Query Frame = 3
Query: 177 TRATNG----ASSSPRMSMA---APVDVSGDGGVTRVVRRKGTGKPVGPGDIAVLKYSGKIIDTGLVFTRSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRCSPRYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPLTPRTPDSIRTEFLRK--QEAAAAAMGPEAEGFAKVLQWFKSIYVFGLFEGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGISTNRSPGGVADDIEVASTVAAVL 926
TR T G A +P MS A +P+D+SGDGGVTR + ++G+GK + GDIA ++++G + +TGLVF++ DEY TL DGTMISGWD GL GL GD A I+C+ RYGYG EGV P+VPP A L FDV++LENEGNIMNP TF D NPLTPRTPD+I F K ++A AAA E EG KV+ W K+IY+FGLFEG+TGEEAPWYL+PLITFPIM I G AF V L G++T+R G V DD +AS A L
Sbjct: 51 TRRTRGWGSRAQQAPAMSTAVATSPIDLSGDGGVTREMIKEGSGKGLATGDIATVRFTGTVAETGLVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTG-VQDDPMLASLGAYAL 308
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: D8LT45_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT45_ECTSI) HSP 1 Score: 236 bits (603), Expect = 1.850e-74 Identity = 120/193 (62.18%), Postives = 139/193 (72.02%), Query Frame = 3
Query: 354 VFTRSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRCSPRYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPLTPRTPDSIRTEFLRK--QEAAAAAMGPEAEGFAKVLQWFKSIYVFGLFEGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGISTNRSPGGVADDIEVASTVAAVL 926
VF++ DEY TL DGTMISGWD GL GL GD A I+C+ RYGYG EGV P+VPP A L FDV++LENEGNIMNP TF D NPLTPRTPD+I F K ++A AAA E EG KV+ W K+IY+FGLFEG+TGEEAPWYL+PLITFPIM I G AF V L G++T+R G V DD +AS A L
Sbjct: 5 VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTG-VQDDPMLASLGAYAL 196
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: A0A7S2UWP8_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP8_9STRA) HSP 1 Score: 200 bits (508), Expect = 7.520e-59 Identity = 104/234 (44.44%), Postives = 146/234 (62.39%), Query Frame = 3
Query: 219 MAAPVDVSGDGGVTRVVRRKGTGKP-VGPGDIAVLKYSGKIIDTGLVFTRSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRCSPRYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPLTPRTPDSIRTEF--LRKQEAAAAAMGPEAEGFAKVLQWFKSIYVFGLF-EGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGISTNRSPGGVADDIEVAS 908
+A V ++ DGGV + + KG + + G IAV+KY + D G F +EYR T+ DGTMI GWD L + +G++A I +P Y YG+EGV PV+ P + ++ +++VL EGNI+NP TFAD NPLTPRTP +I F +++A A EGFAK +W++S+Y FGLF EGQTGE+ P L P ITFP +F + G AF +V+ G+ T R+ V DD ++S
Sbjct: 57 VAEEVQLTDDGGVVKTILEKGDEETSLERGSIAVVKYQAAVRD-GKTFAAGEEYRTTVRDGTMIQGWDIALESMKIGEKAKISLAPEYAYGEEGVAPVIEPNSPVDIELEVLAYEGNILNPATFADNNPLTPRTPQAITAAFESTARRQAREEAELEGLEGFAKFEKWYRSLYFFGLFGEGQTGEKPPILLNPFITFPAIFLVVGVAFYIVFVSGGVITERAAESVLDDASLSS 289
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: A0A7S4EZK8_CHRCT (Peptidylprolyl isomerase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZK8_CHRCT) HSP 1 Score: 176 bits (445), Expect = 2.080e-49 Identity = 89/213 (41.78%), Postives = 127/213 (59.62%), Query Frame = 3
Query: 231 VDVSGDGGVTRVVRRKGTGKPVGPGDIAVLKYSGKIIDTGLVFT----RSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRCSPRYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPLTPRTPDSIRTEFLRKQEAAAAAMGPEAEGFAKVLQWFKSIYVFGLFEGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGI 857
VD+ GDGGV + V+ +G+G G + Y GK++ + F R + TL +G +I GW+ GL + VG++AT+ C+P+Y YG +G+PPV+PP +TLEF+V++L + +TFA+ NP +PRTP I + E A P+ EG +L W KSIY+FG F + GE PWYL PLITFP +F I G F +V AL G+
Sbjct: 78 VDLVGDGGVLKTVKVEGSGSVPQRGATVEVHYEGKLLGSETQFDSSRKRGKPFSFTLGEGKVIGGWEVGLSSMRVGEKATLVCAPQYAYGAKGMPPVIPPSSTLEFEVELLGVSEAQADASTFAEDNPFSPRTPGDIAQAY----EKRLADKAPKREGLEGLLDWAKSIYIFGFFTDEKGELPPWYLNPLITFPSIFVIVGIGFWLVVALGGL 286
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: A0A7S2I8Q8_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8Q8_9STRA) HSP 1 Score: 174 bits (441), Expect = 6.600e-49 Identity = 97/238 (40.76%), Postives = 141/238 (59.24%), Query Frame = 3
Query: 252 GVTRVVRRKGTGKPVGPGDIAVLKYSGKIIDTGLV-FTRSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRCSP--RYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPLTPRTPDSIRTEFLRKQEAAA--AAMGPEAEGFAKVLQWFKSIYVFGLFEGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGISTNRSPGGVADDIEVASTVAAVLAAALGDAF 950
G+T+ ++G G P+ G +A +KYS + T F++SD+ R + DG MI GW+ L +NVG+ ATIR S ++GYG+ GVPP+VPP A +E D+++L E + FA+ PLTPRTP +IR + ++EA A P AEG ++ F S Y FG FEG+TG++APW+LRP ITFP+ FA+ GAAF + IS + V D+++ + + AL AF
Sbjct: 52 GLTKKTTKEGNGPPLERGQVASVKYSCYLPGTETKPFSKSDKQRMIVGDGQMIEGWELALLSMNVGERATIRISDPNKFGYGEAGVPPIVPPNAPIEMDMEILGAEERL-EMGAFANNEPLTPRTPKAIRAAYEARKEAKIQDAIENPPAEGLQAWIEKFNSFYFFGFFEGETGQQAPWFLRPSITFPLAFAVVGAAFYISLKFGAISERGAQ--VTDELDELIVLGGAMRDALMMAF 286
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: A0A7S0LHF9_9EUKA (Peptidylprolyl isomerase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHF9_9EUKA) HSP 1 Score: 173 bits (439), Expect = 7.120e-49 Identity = 88/213 (41.31%), Postives = 123/213 (57.75%), Query Frame = 3
Query: 231 VDVSGDGGVTRVVRRKGTGKPVGPGDIAVLKYSGKIIDTGLVF----TRSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRCSPRYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPLTPRTPDSIRTEFLRKQEAAAAAMGPEAEGFAKVLQWFKSIYVFGLFEGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGI 857
VD+ GDGGV +V+ +G G G + Y G+++ +G F R + TL +G +I GW+ GL + G++AT+ CSP+Y YG +G+PP +PP ATLEFDV+++ + +FAD NPL+PRTP I + RK A+ G L W KSIY+FG F + GE PWYL PLITFP +F + G F +V AL G+
Sbjct: 47 VDLVGDGGVLKVLEVEGAGAVPRRGATVEVHYEGRLVASGERFDSSRVRGKAFSFTLGEGKVIGGWEVGLSSMKAGEKATLVCSPQYAYGPKGIPPTIPPDATLEFDVELISIKMPQSESTSFADDNPLSPRTPKDIAQAYERK----LASKEDSRTGIDGFLDWAKSIYIFGFFADEKGELPPWYLNPLITFPSIFVVVGIGFYLVVALGGL 255
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: A0A4D9D523_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D523_9STRA) HSP 1 Score: 174 bits (440), Expect = 8.800e-49 Identity = 90/215 (41.86%), Postives = 122/215 (56.74%), Query Frame = 3
Query: 234 DVSGDGGVTRVVRRKGTGKPVGPGDIAVLKYSGKIIDTGLVFTRSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRCSPRYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPLTPRTPDSIRTEFLRKQEAAAAAMGPEAEGFA---KVLQWFKSIYVFGLFEGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGISTNR 869
D+ DGGV + + G G V PG +KY G+ D G V R +++R DGTMI G++ +G + VG+ A ++ P Y YG GV PVV P L+FD++VLE GN +NP +F D +P R SI ++ ++ E EG + K +WFKS+Y FG FEG+TGE PWYL P ITFPIMF AAF V+ + G+S R
Sbjct: 64 DLLRDGGVMKTIVTAGEGPLVTPGAEVAVKYEGRTAD-GQVLCRGEDFRFLQGDGTMIGGFETAVGSMRVGEVARVQIQPWYAYGSAGVSPVVSPDMPLDFDIEVLEASGNFLNPKSFRDVDPKKLRDAKSIARDYAQRSELRMR----NEEGLSNAEKASRWFKSLYFFGFFEGETGERPPWYLTPTITFPIMFVTCAAAFYVLISFGGVSIKR 273
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: A0A7S4IXD7_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IXD7_9STRA) HSP 1 Score: 164 bits (416), Expect = 3.160e-45 Identity = 87/211 (41.23%), Postives = 129/211 (61.14%), Query Frame = 3
Query: 252 GVTRVVRRKGTGKPVGPGDIAVLKYS---GKIIDTGLVFTRSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRCSP--RYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPLTPRTPDSIRTEFLRKQEAAAAAMGPEAEGFAKVLQWFKSIYVFGLFEGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGISTNR 869
GVT+ V + G G P+ GD+A +KYS K F +S + + + DG MI GW+ L + VG+ +T+R + +YGYG EGVPP VPPGA +E D+++L+ E + + ++ + ++PL PRTP +I + +Q+ AA E EG +++ K+ Y FG FEG+TGE PW+LRP ITFP+ F I GAAF V + ++G T R
Sbjct: 49 GVTKSVTKSGNGVPLRLGDVATVKYSCYVPKGDGPSSPFAKSAKQKVVIGDGVMIKGWEVALQTMEVGERSTVRVTDAGQYGYGSEGVPPFVPPGAEIEMDMEILDVEAGL-DLSSLSTSDPLKPRTPGAIAAAYKSRQDQAAIEALNEKEGLEGLIEKAKNFYFFGFFEGETGERPPWFLRPSITFPLAFLIVGAAFYVSF-VSGAITER 257
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: A0A7S4QU46_9STRA (Peptidylprolyl isomerase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QU46_9STRA) HSP 1 Score: 159 bits (401), Expect = 5.290e-43 Identity = 92/230 (40.00%), Postives = 132/230 (57.39%), Query Frame = 3
Query: 252 GVTRVVRRKGTGKPVGPGDIAVLKYSGKIIDTGLV-FTRSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRC--SPRYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPLTPRTPDSIRTEFLRKQEAAAA--AMGPEAEGFAKVLQWFKSIYVFGLFEGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGISTNRSPGGVADDIEVASTVAAVL 926
G+ + V ++GTG + G +A +KYS + T F +S++ R + DG MI GW+ L +NVG+ AT+R + ++GYG+ GVPP+VP A +E ++++L E + FA+ PLTPRTP +IR + +Q A P EG KS Y FG FEG+TG++APW+LRP ITFPI FAI GAAF V IS + V D+++ T+ VL
Sbjct: 49 GLVKKVIKEGTGPALERGQVASVKYSCYLPGTETKPFAQSEKQRMIVGDGQMIEGWELALLTMNVGERATVRIDDAAKFGYGEAGVPPIVPSNAPIEMEMEILSAEERL-EMGAFANNEPLTPRTPKAIRAAYEARQSAKLQDEIENPPLEGLDYWKDKIKSYYFFGFFEGETGQQAPWFLRPSITFPIAFAIVGAAFYVSLKFGAISERGAQ--VTDELDELITLQGVL 275
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Match: A0A7S1GGZ7_9STRA (Peptidylprolyl isomerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1GGZ7_9STRA) HSP 1 Score: 159 bits (401), Expect = 5.290e-43 Identity = 88/216 (40.74%), Postives = 122/216 (56.48%), Query Frame = 3
Query: 252 GVTRVVRRKGTGKPVGPGDIAVLKYSGKIIDTGLVFTRSDEYRCTLNDGTMISGWDAGLGGLNVGDEATIRCS-PRYGYGDEGVPPVVPPGATLEFDVQVLENEGNIMNPNTFADTNPL-------TPRTPDSIRTEFLRKQEAAAAAMGPEAEGFAKVLQWFKSIYVFGLFEGQTGEEAPWYLRPLITFPIMFAISGAAFLVVYALNGISTNRSP 875
G+++ V ++G G+ V PGD V+KY + + F+RSD R DG MI G+D + + G+ A++R S P+YGYG+ GVPP VPP A LE D++VL E ++ A+ L PRTP +I + ++ + A E EG V+ K+ Y FGLFEG+TG+EAPWYL+P ITFPI F + GAAF A IS P
Sbjct: 49 GISKTVTQQGIGRSVRPGDNVVVKYVCNAVGSDAAFSRSDRQRFVAGDGIMIPGFDVAIRSMKEGERASVRISDPKYGYGEAGVPPFVPPMAQLELDLEVLNIEESVGLSADPAEMGALGMDGPINRPRTPAAIAAAYEQRMKQKAMNEPEEKEGIEWVVDKVKNSYFFGLFEGETGQEAPWYLKPSITFPIAFLVVGAAFWASLAGGAISERGMP 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1836.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1836.3.2 >prot_P-wetherbeei_contig1836.3.2 ID=prot_P-wetherbeei_contig1836.3.2|Name=mRNA_P-wetherbeei_contig1836.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=290bp MDLGKRLFCACSSCAHSWSTCITQTSTILTRATNGASSSPRMSMAAPVDVback to top mRNA from alignment at P-wetherbeei_contig1836:3809..5834- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1836.3.2 ID=mRNA_P-wetherbeei_contig1836.3.2|Name=mRNA_P-wetherbeei_contig1836.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2026bp|location=Sequence derived from alignment at P-wetherbeei_contig1836:3809..5834- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1836:3809..5834- >mRNA_P-wetherbeei_contig1836.3.2 ID=mRNA_P-wetherbeei_contig1836.3.2|Name=mRNA_P-wetherbeei_contig1836.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=870bp|location=Sequence derived from alignment at P-wetherbeei_contig1836:3809..5834- (Phaeothamnion wetherbeei SAG_119_79)back to top |