mRNA_P-wetherbeei_contig18356.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18356.1.1
Unique NamemRNA_P-wetherbeei_contig18356.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A363TCW1_9CHLR (LacI family transcriptional regulator n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A363TCW1_9CHLR)

HSP 1 Score: 179 bits (455), Expect = 3.960e-51
Identity = 97/263 (36.88%), Postives = 154/263 (58.56%), Query Frame = 1
Query:   16 TIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLINRPSDD-YPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSYNHLLPIPAQRPCAQSGV 801
            TIK IA Q GV+H TVSRAL   P +  ET  RI A+A +L Y PS   RSL+TNR+  LG+++S I DPF+SE+++G+ D     GYSLF+A++  + G  K I Q++ E RVDG+ + C P+ A+     +   ++P+V IN  ++D YP+ +++DD  G   + +HL+  GH +I +LG+  +G   + R   ++ T+ +  L+    DI        + G+EA E +L    E  P+A+  YN +L +   +   Q+G+
Sbjct:    4 TIKDIARQAGVSHTTVSRALHHSPLISQETTRRIHAIALELNYHPSFAARSLKTNRSQALGVIVSHIDDPFFSEILQGIDDVAQANGYSLFIAASQHELGREKAIVQTMREHRVDGVIL-CSPRFAREQGHPLYSFDIPLVAINNQAEDEYPFSIYHDDVDGARQACEHLLGLGHQQIAFLGDATSGRTTQERLAGFQQTMQRSGLKISAEDIHLVAGSGARQGYEAVEYFLGL--EHVPSALICYNDMLAVGVLKGLRQAGL 263          
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A3M1ZTQ4_9CHLR (LacI family transcriptional regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1ZTQ4_9CHLR)

HSP 1 Score: 179 bits (453), Expect = 8.280e-51
Identity = 102/264 (38.64%), Postives = 154/264 (58.33%), Query Frame = 1
Query:   13 VTIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLIN-RPSDDYPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSYNHLLPIPAQRPCAQSGV 801
            VTIK IA   GV+H TVSRAL+G P +  ET  RI  +AA+LGY P+ + R L+T R+G +G+++  I DPF+SEV+ G+ D +  AGYS F++S++ D    KTI + + ERRVDG+ + C  Q+++ ++R ++   +P VLIN + +++  + +++DD  G  A   HL++ GH +I +LGN   G   E R   Y+  L++  L      I     G  + G E     L A PE  PT V  YN ++ I   R  A+ GV
Sbjct:    3 VTIKDIAKIAGVSHTTVSRALRGHPGIAPETVARIKKIAAELGYIPNTVARGLKTQRSGVVGVIVRRIVDPFFSEVLNGIEDTLQAAGYSFFLSSSNRDPEREKTIVRVMSERRVDGVIV-CSSQVSEHHRRQLERFRVPTVLINNQAAEESAHSIYHDDVYGGWAVTHHLIELGHKRIAFLGNARGGRTSEERLRGYKQALSEAGLPIDEACIVSGPNGLAEGGAEGARRLL-ALPE-LPTGVVCYNDVMAIGVMRVLAEHGV 263          
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A3N5SPK5_9CHLR (LacI family transcriptional regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5SPK5_9CHLR)

HSP 1 Score: 175 bits (443), Expect = 2.310e-49
Identity = 96/264 (36.36%), Postives = 153/264 (57.95%), Query Frame = 1
Query:   13 VTIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLINRPS-DDYPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSYNHLLPIPAQRPCAQSGV 801
            VT+K IA + GV+H TVSRAL  +P +  +T +RI  +A +LGY PS   R+L+TNR+  LG+V+S+I DPF+SE+++G+ + V  +GYSLF+A+   D    + I Q++ E R DG+ + C    ++   R      +PIV++N  + +D+ Y +++DD  G      HL++ GHT+I Y+GN A+G     R   +R  +A   L      I+ +  G    G    E +L +RPE  PTA+  YN ++ I   +   Q+G+
Sbjct:    3 VTVKDIAKKAGVSHSTVSRALHSNPLISEQTKQRIQQIAVELGYLPSAAARTLKTNRSQVLGVVLSSIDDPFFSEILQGIEEIVQSSGYSLFIAAAHRDPAREREIVQAMVEHRTDGVII-CSTSFSEERSRQFLRYGVPIVVVNNQAVEDFRYSIYHDDVDGSRQVTRHLIELGHTRIAYIGNSASGRTTLDRLTGFRQEMASAGLAVPAEYIYEASGGGTDDGLSVVEHFL-SRPEC-PTALVCYNDMVAIGVMKGLQQAGI 263          
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A1F8SWS3_9CHLR (HTH lacI-type domain-containing protein n=1 Tax=Chloroflexi bacterium RBG_19FT_COMBO_47_9 TaxID=1797665 RepID=A0A1F8SWS3_9CHLR)

HSP 1 Score: 174 bits (441), Expect = 4.460e-49
Identity = 97/251 (38.65%), Postives = 143/251 (56.97%), Query Frame = 1
Query:   13 VTIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLINRPS-DDYPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSYNHLL 762
            +TIK IA   GV+H TVSRAL   P +  +T ERI  +A++LGY PS   RSLRTNR+  LG+++S I DP++SE+++G+ D     GYSLF+AS   D     +I Q++ E RVDG+ + C P  +      +   N+PIV +N  + +DY Y +++DD  G      HL+K  H+KI YLGN  +G   + R   ++  + + K+  R   I          G EA E + ++ P  RPTA+  YN L+
Sbjct:    3 ITIKDIARHAGVSHTTVSRALNHSPLISLQTTERIQEIASELGYHPSVAARSLRTNRSQVLGVIVSHIADPYFSEILQGIDDVAQEHGYSLFIASAQNDPLRENSIVQTMREHRVDGVIL-CSPNFSAEQSNQLNSYNIPIVALNNQAPEDYRYAIYHDDVDGSKQVCQHLIKLRHSKIAYLGNALSGRTGQERLKGFKQAMQEAKIPVRPDFIHQVSGNSAGLGLEAVE-YFQSLPV-RPTALICYNDLM 250          
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A1F8SJL5_9CHLR (HTH lacI-type domain-containing protein n=1 Tax=Chloroflexi bacterium RBG_19FT_COMBO_49_13 TaxID=1797667 RepID=A0A1F8SJL5_9CHLR)

HSP 1 Score: 174 bits (440), Expect = 6.290e-49
Identity = 97/263 (36.88%), Postives = 148/263 (56.27%), Query Frame = 1
Query:   16 TIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLINRPSD-DYPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSYNHLLPIPAQRPCAQSGV 801
            TIK IA   GV+H TVSRAL   P +  +T ERI  +A QLGY PS   RSL+TNR+  LG+++S I+DP++SE+++G+ D     GYSLF+AS   D      I Q++ E RV+G+ + C P  +   +  +   ++PIV IN  +D DY + +++DD  G      HL+  GH KI YLG+  +G   + R   ++  + ++ L  R   I        + GFE  + ++K    +RPTAV  YN ++ +   +   Q+GV
Sbjct:    4 TIKDIARYAGVSHTTVSRALHHSPLISTQTTERIREIATQLGYHPSVAARSLKTNRSQVLGVIVSHISDPYFSEILQGIDDVAQENGYSLFIASAQHDPVRENAIVQTMREHRVEGVIL-CSPHFSPDQRSRLNFTSIPIVAINNQADEDYRFAIYHDDVDGSRQLCQHLIGLGHKKIAYLGDATSGRTTKERLDGFKQAMEEFDLPIRAEFIHQVSGNSPEQGFEGLDYFMKL--SERPTAVICYNDMMAVGVLKGLHQAGV 263          
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A3D0CUT8_9CHLR (LacI family transcriptional regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0CUT8_9CHLR)

HSP 1 Score: 173 bits (439), Expect = 7.230e-49
Identity = 97/264 (36.74%), Postives = 145/264 (54.92%), Query Frame = 1
Query:   13 VTIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLINRPSDD-YPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSYNHLLPIPAQRPCAQSGV 801
            V+IK IA   GV+H TVSRAL+G P +   T  R+  LAA++GYSPS + R LRT+RT  +G+V++ +TDPF +EV++G+    + AGYSLF+A+++ D      + ++  E+RVDG+ +    ++ + Y  L+ E  +PIVLIN   D  + + V NDD  G      HL++ GH +I YLGN   G  D  R   YR+ L    L P    +     G+   G    +      P   PT +  YN ++ + A     Q+GV
Sbjct:    3 VSIKDIARAAGVSHSTVSRALRGHPAISEATRSRVSQLAAEMGYSPSAVARGLRTSRTRVIGLVVTHLTDPFLTEVVQGIEALALDAGYSLFLATSNVDPDREVAVVKAFREQRVDGILVSS-SRVGERYLPLLAESQVPIVLINNQHDGTFAFSVTNDDRYGAEVVTRHLIESGHERIAYLGNHRGGQTDVDRLAGYRAALHAAGLTPDPALVVHGPNGRAPGGEAGVQALFPLDPH--PTGLVCYNDMMALGALHRLKQAGV 263          
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A7C4NCR4_9CHLR (LacI family transcriptional regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4NCR4_9CHLR)

HSP 1 Score: 172 bits (436), Expect = 2.410e-48
Identity = 98/254 (38.58%), Postives = 141/254 (55.51%), Query Frame = 1
Query:   13 VTIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLINRP-SDDYPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLK-ARPEDRPTAVPSYNHLLPI 768
            +TIK IA   GV+H TVSRAL   P +  ET   I  LAA++GY PS   R L+T RT  LG+++S I DPF+SEV++G+ + + PAGYSLFVA+T  D    K + Q++ +R VDG+ + C PQ +    R++    LP+V++N   + D PY+V+NDD  G      HL+  GH  I YLGN   G     R   +R  +    L    +++  +       G+   + +L  AR   RPTA+  YN  L +
Sbjct:    3 ITIKDIAKAAGVSHTTVSRALHDHPAISRETVAEIKRLAAKMGYVPSATARGLKTRRTRALGVIVSHIDDPFWSEVLQGIDEVLHPAGYSLFVAATHRDRQREKEVVQAMVQRGVDGVIL-CAPQFSPDQSRVMHAYGLPMVIVNNEGASDSPYLVYNDDRYGSHLLARHLITLGHRDIAYLGNEQGGRTTIEREAGFREEMQAAGLVVPEQNVHLALESTPAGGYAGAQYFLSLAR---RPTAIMCYNDHLAV 252          
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A1Y6K714_9CHLR (LacI family transcription regulator n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A1Y6K714_9CHLR)

HSP 1 Score: 169 bits (429), Expect = 2.860e-47
Identity = 103/263 (39.16%), Postives = 144/263 (54.75%), Query Frame = 1
Query:   16 TIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLIN-RPSDDYPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSYNHLLPIPAQRPCAQSGV 801
            TIKTIA   GV+H TVSRAL+G P V   TAERI   A QL Y PS   RSL+T RT  LG+++S I DPF+SEV+ G+  A   AGYSLF+ S++ DA     I Q++ E+R+DG  + C   ++    R    +  PIV++N + +D Y + +++DD  G      HL++ GH  I YLGN  +G     R    +  +    L      I +   G L+ G E    +L     + PTAV  +N +L I A + C Q+GV
Sbjct:    4 TIKTIAKITGVSHSTVSRALRGSPLVADLTAERIRKAAQQLDYLPSAAARSLKTKRTHVLGVILSGIADPFFSEVLNGIEGAAHAAGYSLFIGSSNHDADKEARIVQTMLEQRIDGGII-CSTPVSIERWRQFPTDRFPIVVVNNQAADHYNFSIYHDDIDGSRQLARHLIELGHKDIAYLGNSHSGKTTLDRLSGLQEEMEYHGLSVSPDHIHYVPGGSLQMGAEGMNYFLSL--PNPPTAVMCFNDMLAIGALKACRQAGV 263          
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A6L3EZM8_9CHLR (LacI family transcriptional regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3EZM8_9CHLR)

HSP 1 Score: 169 bits (428), Expect = 3.930e-47
Identity = 102/265 (38.49%), Postives = 151/265 (56.98%), Query Frame = 1
Query:   13 VTIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLINRPSDDYPYI--VFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSYNHLLPIPAQRPCAQSGV 801
            VTIK IA   GV+H TVSRAL+G  R+  ET ERI  +A +LGY P+ + R L+T R+  LG+++  I DPF+SEV++G+ D +  A YSLF+A++  +    + I Q++ ER+V+G+ +    QI     R +   ++P++LIN  + D P I  V++DDA G    + HL+  GH +I +LGN+  G  +  R   YR  L +  L      I   + GQ   G E     L+  P  RPTAV  YN L+ I A +   Q+G+
Sbjct:    3 VTIKDIASVAGVSHTTVSRALRGHTRISTETIERIQKIADELGYVPNTVARGLKTRRSRVLGVIVRRIDDPFFSEVLQGIEDVLQEADYSLFLAASRRNPDREREIMQAMGERQVEGVIVSST-QIQPEQLRQLGHFDVPMILINNQAIDEPDIHSVYHDDAFGSQQLIQHLIDLGHQRIAFLGNVHGGKTNADRLRGYREALLQAGLSINPDYIVVGKNGQPDGGSEGIRDVLELSP--RPTAVICYNDLMAIGAIQGVLQAGL 264          
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Match: A0A3N5M2L8_9CHLR (LacI family transcriptional regulator (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5M2L8_9CHLR)

HSP 1 Score: 166 bits (421), Expect = 4.200e-46
Identity = 95/250 (38.00%), Postives = 139/250 (55.60%), Query Frame = 1
Query:   16 TIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSPSRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVASTDTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLINRPS-DDYPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLSYRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSYNHLL 762
            TIK IA + GVTH TVSRAL G P +  ETA+RI   A +LGY PS   RSL+TN T  LG+V+S+I DPF+SE+++G+ +    AGYSLF+ ++  D    + I Q++ E RVDG+ + C     +   R + + N PIV +N  S +DY Y +F+DD  G      HL+  GH +I ++GN  +G     R   ++  +   +L      I     G  + G  A + +L      RPTAV  +N ++
Sbjct:    4 TIKDIAKRAGVTHSTVSRALHGSPLISQETADRIRKAALELGYQPSAAARSLKTNSTRVLGVVLSSIDDPFFSEILQGIEETAQTAGYSLFIGASQRDPQREQKIVQAMVEHRVDGIII-CSTSFGEQQGRQLSKYNRPIVAVNSQSVEDYRYSIFHDDVDGSRQITRHLIDLGHQRIAFIGNSLSGRTTLDRQAGFQQEMEAARLPILPGFIHQEPGGVPENGVAALDYYLSL--PSRPTAVFCFNDMV 250          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18356.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A363TCW1_9CHLR3.960e-5136.88LacI family transcriptional regulator n=1 Tax=Anae... [more]
A0A3M1ZTQ4_9CHLR8.280e-5138.64LacI family transcriptional regulator n=1 Tax=Chlo... [more]
A0A3N5SPK5_9CHLR2.310e-4936.36LacI family transcriptional regulator n=1 Tax=Chlo... [more]
A0A1F8SWS3_9CHLR4.460e-4938.65HTH lacI-type domain-containing protein n=1 Tax=Ch... [more]
A0A1F8SJL5_9CHLR6.290e-4936.88HTH lacI-type domain-containing protein n=1 Tax=Ch... [more]
A0A3D0CUT8_9CHLR7.230e-4936.74LacI family transcriptional regulator n=1 Tax=Chlo... [more]
A0A7C4NCR4_9CHLR2.410e-4838.58LacI family transcriptional regulator n=1 Tax=Chlo... [more]
A0A1Y6K714_9CHLR2.860e-4739.16LacI family transcription regulator n=2 Tax=Chloro... [more]
A0A6L3EZM8_9CHLR3.930e-4738.49LacI family transcriptional regulator n=1 Tax=Chlo... [more]
A0A3N5M2L8_9CHLR4.200e-4638.00LacI family transcriptional regulator (Fragment) n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18356contigP-wetherbeei_contig18356:1..801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1267535.KB906767_gene2354
PFAMsLacI,Peripla_BP_3
Model size801
Max annot lvl57723|Acidobacteria
KEGG koko:K05499
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.01e-39
EggNOG OGsCOG1609@1|root,COG1609@2|Bacteria,3Y6K5@57723|Acidobacteria
Descriptionhelix_turn _helix lactose operon repressor
Cds size801
COG categoryK
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186143.7671733-CDS-P-wetherbeei_contig18356:0..8011683186143.7671733-CDS-P-wetherbeei_contig18356:0..801Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18356 1..801 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18356.1.1prot_P-wetherbeei_contig18356.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18356 1..801 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18356.1.1

>prot_P-wetherbeei_contig18356.1.1 ID=prot_P-wetherbeei_contig18356.1.1|Name=mRNA_P-wetherbeei_contig18356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp
MGSHVTIKTIADQVGVTHGTVSRALKGDPRVKHETAERIVALAAQLGYSP
SRIGRSLRTNRTGTLGIVISAITDPFYSEVIRGVHDAVMPAGYSLFVAST
DTDAGCPKTIAQSLWERRVDGLFMGCLPQIAQPYQRLVQEENLPIVLINR
PSDDYPYIVFNDDARGVAASVDHLVKQGHTKIGYLGNLAAGGPDEARYLS
YRSTLAKWKLEPRNRDIFFSQRGQLKAGFEATEMWLKARPEDRPTAVPSY
NHLLPIPAQRPCAQSGV
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mRNA from alignment at P-wetherbeei_contig18356:1..801-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18356.1.1 ID=mRNA_P-wetherbeei_contig18356.1.1|Name=mRNA_P-wetherbeei_contig18356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig18356:1..801- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTTCACACGTTACGATTAAAACCATCGCCGATCAGGTTGGCGTAAC CCACGGAACGGTCTCGCGCGCTCTCAAGGGGGACCCTCGCGTGAAACATG AGACGGCCGAAAGAATCGTGGCGCTGGCCGCCCAGCTTGGATATTCCCCC AGCCGCATCGGCCGCAGCCTGCGCACCAACCGCACGGGTACCCTGGGTAT CGTAATTTCCGCCATCACCGACCCCTTCTACTCGGAAGTCATCCGCGGTG TGCACGACGCTGTCATGCCCGCCGGCTACAGCCTCTTTGTGGCCTCCACG GACACCGACGCAGGCTGCCCCAAGACTATCGCCCAGAGCCTGTGGGAACG CCGCGTGGACGGCCTGTTTATGGGCTGTCTGCCGCAAATCGCGCAGCCCT ACCAGCGCCTGGTTCAAGAAGAAAATCTCCCCATCGTTCTCATCAATCGC CCCAGCGACGACTACCCCTACATCGTCTTTAACGATGACGCCCGAGGCGT GGCGGCCAGCGTCGACCACCTCGTGAAACAGGGCCACACCAAGATCGGCT ACCTGGGGAATCTGGCGGCGGGCGGCCCCGACGAGGCGCGCTATCTCAGC TATCGCTCCACTCTTGCCAAGTGGAAGCTCGAACCGCGCAATCGCGACAT CTTCTTCTCCCAGCGCGGCCAACTCAAGGCCGGCTTCGAAGCCACCGAGA TGTGGCTCAAGGCTCGACCCGAGGACCGGCCCACGGCCGTACCCTCCTAC AACCATTTGCTCCCTATCCCCGCGCAGCGGCCCTGCGCCCAATCGGGAGT C
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18356:1..801-

>mRNA_P-wetherbeei_contig18356.1.1 ID=mRNA_P-wetherbeei_contig18356.1.1|Name=mRNA_P-wetherbeei_contig18356.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig18356:1..801- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTTCACACGTTACGATTAAAACCATCGCCGATCAGGTTGGCGTAAC
CCACGGAACGGTCTCGCGCGCTCTCAAGGGGGACCCTCGCGTGAAACATG
AGACGGCCGAAAGAATCGTGGCGCTGGCCGCCCAGCTTGGATATTCCCCC
AGCCGCATCGGCCGCAGCCTGCGCACCAACCGCACGGGTACCCTGGGTAT
CGTAATTTCCGCCATCACCGACCCCTTCTACTCGGAAGTCATCCGCGGTG
TGCACGACGCTGTCATGCCCGCCGGCTACAGCCTCTTTGTGGCCTCCACG
GACACCGACGCAGGCTGCCCCAAGACTATCGCCCAGAGCCTGTGGGAACG
CCGCGTGGACGGCCTGTTTATGGGCTGTCTGCCGCAAATCGCGCAGCCCT
ACCAGCGCCTGGTTCAAGAAGAAAATCTCCCCATCGTTCTCATCAATCGC
CCCAGCGACGACTACCCCTACATCGTCTTTAACGATGACGCCCGAGGCGT
GGCGGCCAGCGTCGACCACCTCGTGAAACAGGGCCACACCAAGATCGGCT
ACCTGGGGAATCTGGCGGCGGGCGGCCCCGACGAGGCGCGCTATCTCAGC
TATCGCTCCACTCTTGCCAAGTGGAAGCTCGAACCGCGCAATCGCGACAT
CTTCTTCTCCCAGCGCGGCCAACTCAAGGCCGGCTTCGAAGCCACCGAGA
TGTGGCTCAAGGCTCGACCCGAGGACCGGCCCACGGCCGTACCCTCCTAC
AACCATTTGCTCCCTATCCCCGCGCAGCGGCCCTGCGCCCAATCGGGAGT
C
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