mRNA_P-wetherbeei_contig18354.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18354.1.1 vs. uniprot
Match: A0A3M7QWT5_BRAPC (Fibroblast growth factor receptor-like n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7QWT5_BRAPC) HSP 1 Score: 132 bits (331), Expect = 3.080e-34 Identity = 65/145 (44.83%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 238 SGTAAFTWYESYAPCCYDS-NADQTECTLYNACKWAGQFAALSGTKSLAWVKSHDLVSFYDNNHPGDAYFQTHYGNRYVRVTKGAVSFVALAADTCGNIDCNGCCRKNCNAAGTRYLVDMEYWTVMRHFNGDINAADGTLQFQFL 669
+G A TWYESYA CC + N D T T+ + G FA S KSL+WVKS++++SF+D++ P + T Y + +R+ K +F A+ ADTCG+ DCNGCC KN A +LVDMEY+TV+++ G++NAA G ++F+ L
Sbjct: 115 TGIAQLTWYESYARCCKSNPNYDPTVSTIECDFSYPGWFAGYSNQKSLSWVKSNNIISFFDSSDPNGVNWATKYARKTIRLKKNGKTFTAIIADTCGDHDCNGCCTKN---AQNGFLVDMEYYTVLKNL-GNLNAATGNIEFEIL 255
BLAST of mRNA_P-wetherbeei_contig18354.1.1 vs. uniprot
Match: A0A226DHF4_FOLCA (Uncharacterized protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DHF4_FOLCA) HSP 1 Score: 92.0 bits (227), Expect = 6.990e-20 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 1
Query: 247 AAFTWYESYAPCCYDSN-ADQTECTLYNACKWAGQFAALSGTKSLAWVKSHDLVSFYDNNHPGDAYFQTHYGNRYVRVTKGAVSFVALAADTCGNIDCNGCCRKNCNAAGTRYLVDMEYWTVMRHFNGDINAADGTLQFQFL 669
A T Y SY PCC D N DQ+EC Y+ CK+ GQFA +SGTKS AWVK++++++ H DA Y + + + + A D C + DCN CC KN + T++L+D+E T M+HF G DG ++++ L
Sbjct: 27 ADLTNYWSYPPCCDDPNYPDQSECRDYSGCKYRGQFAFVSGTKSEAWVKANNIIAI----HHKDA---GKYKLKTLELRANGKTIKAKVYDECNDKDCNNCCTKN--SKRTKFLIDIERNT-MKHFGG---KGDGIVEWRCL 155
BLAST of mRNA_P-wetherbeei_contig18354.1.1 vs. uniprot
Match: A0A250IPC6_9DELT (Uncharacterized protein n=1 Tax=Melittangium boletus DSM 14713 TaxID=1294270 RepID=A0A250IPC6_9DELT) HSP 1 Score: 80.1 bits (196), Expect = 4.400e-14 Identity = 51/139 (36.69%), Postives = 69/139 (49.64%), Query Frame = 1
Query: 244 TAAFTWYESYAPCCYDSNADQTECTLYNACKWAGQFAALSGTKSLAWVKSHDLVSFYDNNHPGDAYFQTHYGNRYVRVTKGAVSFVALAADTCGNIDCNGCCRKNCNAAGTRYLVDMEYWTVMRHFNGDINAADGTLQF 660
TA T Y SY + ECT YN C WAGQFAA SG KS AWV SH++V+ + P ++ H + + G + V DTC + DC+GCC +N A L+D+E +T N DG +Q+
Sbjct: 210 TANKTNYTSYP------DPGSEECTKYNGCTWAGQFAACSGKKSEAWVASHNIVAIF----PSMNAYKLH----DLCLKSGTKTIVVTVLDTCADSDCSGCCTQNRGNADA--LIDLESYT-----NARWGVPDGRIQW 327
BLAST of mRNA_P-wetherbeei_contig18354.1.1 vs. uniprot
Match: A0A250J6V2_9DELT (Uncharacterized protein n=3 Tax=Cystobacter fuscus TaxID=43 RepID=A0A250J6V2_9DELT) HSP 1 Score: 79.7 bits (195), Expect = 6.090e-14 Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 1
Query: 244 TAAFTWYESYAPCCYDSNADQTECTLYNACKWAGQFAALSGTKSLAWVKSHDLVSFYDNNHPGDAYFQTHYGNRYVRVTKGAVSFVALAADTCGNIDCNGCCRKNCNAAGTRYLVDMEYWTVMRHFNGDINAADGTLQF 660
TA+ T Y SY + ECT YN C WAGQFAA SG KS AWV +H++V+ + N + + H + + G + V DTC + DC+GCC +N A L+D+E +T N DG +Q+
Sbjct: 211 TASKTNYTSYP------DPGSEECTKYNGCTWAGQFAACSGKKSEAWVAAHNIVAVFPNMNA----LKLH----DLCLKSGTKTIVVTVLDTCADSDCSGCCTQNKGNADA--LIDLESYT-----NARWGVPDGRIQW 328
BLAST of mRNA_P-wetherbeei_contig18354.1.1 vs. uniprot
Match: A0A2P6V9D2_9CHLO (Uncharacterized protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V9D2_9CHLO) HSP 1 Score: 80.1 bits (196), Expect = 8.570e-14 Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 280 CCYDSNADQTECTL----YNACKWAGQFAALSGTKSLAWVKSHDLVSFYD--NNHPGDAYFQTHYGNRY-VRVTKGAVSFVALAADTCGNIDCNGCCRKNCNAAGTRYLVDMEYWTVMRHFNGDI 633
CC D +CT Y+ CKW G FA L+G +SL+WVKS+++V+FY+ N+ + + G +R + DTC + DC+GCC +N N G + LVD+E+ T R + GD+
Sbjct: 389 CC--RRGDGKDCTRLGRDYSGCKWEGMFAGLNGKQSLSWVKSNNIVAFYEAPNSRNRKVWGEKWAGKTLRIRNPDSGKTMEVTIYDTCDDADCDGCCTRNANQHGGQ-LVDLEHHTARRFWGGDV 510
BLAST of mRNA_P-wetherbeei_contig18354.1.1 vs. uniprot
Match: S9QAB7_9DELT (Uncharacterized protein n=7 Tax=Archangiaceae TaxID=39 RepID=S9QAB7_9DELT) HSP 1 Score: 77.0 bits (188), Expect = 5.530e-13 Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 1
Query: 244 TAAFTWYESYAPCCYDSNADQTECTLYNACKWAGQFAALSGTKSLAWVKSHDLVSFYDNNHPGDAYFQTHYGNRYVRVTKGAVSFVALAADTCGNIDCNGCCRKNCNAAGTRYLVDMEYWTVMRHFNGDINAADGTLQF 660
TA T Y SY + ECT YN C WAGQFAA G KS AWV +H++V+ + N + + H + + G + V DTC + DC+GCC +N A L+D+E +T N DG++Q+
Sbjct: 210 TANKTNYTSYP------DPGSEECTKYNGCTWAGQFAACEGKKSEAWVAAHNIVAVFPNMNA----LKLH----DLCLKSGTKTIVVTVLDTCADSDCSGCCTQNKGNADA--LIDLESYT-----NERWGVPDGSIQW 327
BLAST of mRNA_P-wetherbeei_contig18354.1.1 vs. uniprot
Match: UPI001CCDB327 (hypothetical protein n=1 Tax=Hyalangium sp. H56D21 TaxID=2861190 RepID=UPI001CCDB327) HSP 1 Score: 77.0 bits (188), Expect = 5.570e-13 Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 1
Query: 244 TAAFTWYESYAPCCYDSNADQTECTLYNACKWAGQFAALSGTKSLAWVKSHDLVSFYDNNHPGDAYFQTHYGNRYVRVTKGAVSFVALAADTCGNIDCNGCCRKNCNAAGTRYLVDMEYWTVMRHFNGDINAADGTLQF 660
TA T Y SY D N++ ECT YN C WAGQFAA S K +WV +H++V+ + N + Y + + G + V DTC + DC+GCC +N A L+D+E +T N DG +Q+
Sbjct: 211 TANKTNYTSYP----DPNSE--ECTEYNGCTWAGQFAACSAKKPESWVAAHNIVAVFPNMNA--------YKLHDLCLKSGTKTIVVTVLDTCADSDCSGCCTRNKGDADA--LIDLESYT-----NARWGVPDGRIQW 328
BLAST of mRNA_P-wetherbeei_contig18354.1.1 vs. uniprot
Match: A0A1H7Z1Z9_STIAU (Uncharacterized protein n=2 Tax=Stigmatella TaxID=40 RepID=A0A1H7Z1Z9_STIAU) HSP 1 Score: 76.3 bits (186), Expect = 1.050e-12 Identity = 47/139 (33.81%), Postives = 67/139 (48.20%), Query Frame = 1
Query: 244 TAAFTWYESYAPCCYDSNADQTECTLYNACKWAGQFAALSGTKSLAWVKSHDLVSFYDNNHPGDAYFQTHYGNRYVRVTKGAVSFVALAADTCGNIDCNGCCRKNCNAAGTRYLVDMEYWTVMRHFNGDINAADGTLQF 660
TA T Y SY + ECT YN C WAGQFAA SG K +WV +H++ + + N + Y + + G+ + V DTC + DC+GCC +N A L+D+E +T N DG +Q+
Sbjct: 211 TANKTNYTSYP------DPGSEECTEYNGCTWAGQFAACSGKKPESWVAAHNIAAVFPNMNA--------YKLHDLCLKSGSKTIVVTVLDTCADSDCSGCCTRNKGDADA--LIDLESYT-----NARWGVPDGRIQW 328 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18354.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18354.1.1 >prot_P-wetherbeei_contig18354.1.1 ID=prot_P-wetherbeei_contig18354.1.1|Name=mRNA_P-wetherbeei_contig18354.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp MVKIAVGAGFLLFGFLFEAVVGQRCGKDFPGNTCPVTEPCCSQYGWCGKKback to top mRNA from alignment at P-wetherbeei_contig18354:146..817+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18354.1.1 ID=mRNA_P-wetherbeei_contig18354.1.1|Name=mRNA_P-wetherbeei_contig18354.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig18354:146..817+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18354:146..817+ >mRNA_P-wetherbeei_contig18354.1.1 ID=mRNA_P-wetherbeei_contig18354.1.1|Name=mRNA_P-wetherbeei_contig18354.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig18354:146..817+ (Phaeothamnion wetherbeei SAG_119_79)back to top |