mRNA_P-wetherbeei_contig18302.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18302.1.1 vs. uniprot
Match: UPI001A0CC2D5 (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A0CC2D5) HSP 1 Score: 72.0 bits (175), Expect = 4.080e-12 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 154 DTARYFWALTRAAALASD-----LAPSNSLESLGGFLSGFGY--DAAARTSLSTLQRPATFPSTSPTGSDVRTFLQGRARQELTGALATLSQVSDDFRVSWTD 441
DTAR+F+ALTR AA+ D +A +NSL GG L GFG D R++ + P T P+ SPTGSD+++FL R E+ GA+ L +S+DF WT+
Sbjct: 11 DTARFFYALTRVAAVGFDTYGDGVADNNSL---GGILDGFGSPSDDTKRSNFEAISFPETLPADSPTGSDLQSFLYDAVRPEIEGAIDNLDAISEDFSKQWTE 110
BLAST of mRNA_P-wetherbeei_contig18302.1.1 vs. uniprot
Match: A0A7V0P4S3_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V0P4S3_9DELT) HSP 1 Score: 71.2 bits (173), Expect = 1.380e-11 Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 154 DTARYFWALTRAAAL----ASDLAPSNSLESLGGFLSGFGYDAAARTSL----STLQRPATFPSTSPTGSDVRTFLQGRARQELTGALATLSQVSDDFRVSWTD 441
D AR+F+ALTRAAAL SD P N L +LG L FG+ ++ R S+ P T PSTSPTG D++ FL R E+ GA+ +L V+ F + WT+
Sbjct: 588 DVARFFYALTRAAALWFDMYSDGNPDNGLNTLGDILDAFGFSSSGRDPWDFGGSSDPCPETLPSTSPTGGDLQAFLYNVVRPEIEGAINSLDMVAQSFSIDWTE 691
BLAST of mRNA_P-wetherbeei_contig18302.1.1 vs. uniprot
Match: A0A3B1D6T0_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1D6T0_9ZZZZ) HSP 1 Score: 64.3 bits (155), Expect = 3.270e-9 Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 76 ILQARDQFAVAVSLATSTTGATTAQLDTARYFWALTRAAALASDL---APSNSLESLGGFLSGFGYDAA--ARTSLSTLQRPATFPSTSPTGSDVRTFLQGRARQELTGALATLSQVSDDFRVSWTD 441
+L+AR+ F AV LA ++T T DTAR+F+ALTR AA+++D S+ + +LG L G + AR + T++ PS +P GS+++ FL R E+ GA+A L VS DF W +
Sbjct: 194 MLKARNYFKAAVDLAGNSTSNDT---DTARFFYALTRVAAISADNFSDGNSSDMNNLGDILDRCGAPPSDTARVNWDTIECSDPLPSNTPDGSELQKFLYDVVRPEIKGAIANLETVSPDFNEQWRE 317
BLAST of mRNA_P-wetherbeei_contig18302.1.1 vs. uniprot
Match: A0A3N5PYL3_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A3N5PYL3_9DELT) HSP 1 Score: 62.4 bits (150), Expect = 1.220e-8 Identity = 51/146 (34.93%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 19 VQEKIDQGTASLALGTSAGILQARDQFAVAVSLATSTTGATTAQLDTARYFWALTRAAALASDLAPSNS---LESLGGFLSGFGYDAA--ARTSLSTLQRPATFPSTSPTGSDVRTFLQGRARQELTGALATLSQVSDDFRVSWTD 441
+ E I +G +L+ G IL A+ FA A SLA S + +DT R+F+A T AL D +N+ L +LG L FG ++ R ++ P+ FPS SPTG+++++FL+ + EL A + L++VS+ F +WT+
Sbjct: 58 IDELIPKGLDALSSGD---ILAAKRYFAQAESLAGSESSNI---VDTTRFFYAYTYILALGYDRLSNNTNDGLNNLGDILDAFGISSSDEVRKDVTAFPIPSPFPSNSPTGAELQSFLKNKTLPELIKAQSVLNKVSNGFGKTWTE 197
BLAST of mRNA_P-wetherbeei_contig18302.1.1 vs. uniprot
Match: A0A522FX33_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A522FX33_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 2.050e-8 Identity = 41/103 (39.81%), Postives = 57/103 (55.34%), Query Frame = 1
Query: 148 QLDTARYFWALTRAAAL----ASDLAPSNSLESLGGFLSGFGYDAAARTSLST-LQRPATFPSTSPTGSDVRTFLQGRARQELTGALATLSQVSDDFRVSWTD 441
+ DTAR+F AL+R AAL ASD P+N L + G L FG R + P PS SPTG +++TF+ R E+ GA+A L+ VS F ++W +
Sbjct: 171 EADTARFFAALSRVAALWYNQASDGNPNNGLLTTGDILDAFGCSVFGRDPGNPDFTCPDILPSNSPTGGELKTFINNVMRPEIEGAIANLNNVSQSFNINWIE 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18302.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18302.1.1 >prot_P-wetherbeei_contig18302.1.1 ID=prot_P-wetherbeei_contig18302.1.1|Name=mRNA_P-wetherbeei_contig18302.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp SAGSLAVQEKIDQGTASLALGTSAGILQARDQFAVAVSLATSTTGATTAQback to top mRNA from alignment at P-wetherbeei_contig18302:65..505- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18302.1.1 ID=mRNA_P-wetherbeei_contig18302.1.1|Name=mRNA_P-wetherbeei_contig18302.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig18302:65..505- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18302:65..505- >mRNA_P-wetherbeei_contig18302.1.1 ID=mRNA_P-wetherbeei_contig18302.1.1|Name=mRNA_P-wetherbeei_contig18302.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig18302:65..505- (Phaeothamnion wetherbeei SAG_119_79)back to top |