mRNA_P-wetherbeei_contig18265.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: A0A7C4XRB7_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XRB7_9HYPH) HSP 1 Score: 192 bits (487), Expect = 7.420e-61 Identity = 83/101 (82.18%), Postives = 95/101 (94.06%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKRELE 303
TYADEVEGALAAFGYRM+LK+S+M RK+RP+VW+WMQ+PRNAWAHYILAIHKGKEGHWILI+G KMCDT+T G+WTFVCDGPHRGARIME+FEV+R LE
Sbjct: 66 TYADEVEGALAAFGYRMTLKRSYMHLPRKQRPTVWSWMQQPRNAWAHYILAIHKGKEGHWILIRGAKMCDTYTEGRWTFVCDGPHRGARIMEVFEVRRSLE 166
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: A0A2S5M5F1_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5M5F1_HYPSQ) HSP 1 Score: 189 bits (479), Expect = 9.790e-60 Identity = 82/102 (80.39%), Postives = 93/102 (91.18%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKRELEG 306
TYADEVE ALA FGYRM LK++F+ +ARKERPSVW WMQKPRNAWA+YILAIHKGKEGHWIL+KGVKMCDTFT GKWTFV DGPHRG RIME+FEV++ ++G
Sbjct: 59 TYADEVEAALAHFGYRMELKETFLHKARKERPSVWTWMQKPRNAWAYYILAIHKGKEGHWILVKGVKMCDTFTEGKWTFVVDGPHRGCRIMEVFEVRKAIDG 160
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: A0A7Y5CXT6_HYPSQ (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CXT6_HYPSQ) HSP 1 Score: 188 bits (477), Expect = 2.320e-59 Identity = 83/101 (82.18%), Postives = 92/101 (91.09%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKRELE 303
TYADEVE ALA FG+RM LK+SFM +ARKERPSVW WMQKPRNAWA+YILAIHKGKEGHWIL+KGVKMCDTFT GKWTFV DGPH+G RIMEIFEVK+ ++
Sbjct: 64 TYADEVEAALAHFGFRMELKESFMHKARKERPSVWTWMQKPRNAWAYYILAIHKGKEGHWILVKGVKMCDTFTEGKWTFVVDGPHKGCRIMEIFEVKKSID 164
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: V5SFH4_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SFH4_9HYPH) HSP 1 Score: 188 bits (477), Expect = 2.390e-59 Identity = 83/101 (82.18%), Postives = 92/101 (91.09%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKRELE 303
TYADEVE ALA +GY M+LK++FM RK+RPSVW WMQKPR+AWAHYILAIHKGKEGHWILIKGVKMCDTFT G+WTFVCDGPHRGARIME+FEV+R LE
Sbjct: 65 TYADEVEAALAVYGYGMTLKETFMHLERKKRPSVWTWMQKPRSAWAHYILAIHKGKEGHWILIKGVKMCDTFTEGRWTFVCDGPHRGARIMEVFEVRRALE 165
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: A0A2S5MWE9_HYPSQ (Uncharacterized protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5MWE9_HYPSQ) HSP 1 Score: 186 bits (473), Expect = 7.060e-59 Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKRELE 303
TYADEVE ALA +GY M+LK+SFM RK+RPSVW WMQKPRNAW+HYILAIHKGKEGHWILIKGVKMCDTFT G+WTFVCDGPHRG RIMEIFEV+R ++
Sbjct: 55 TYADEVEAALAMYGYAMTLKESFMHLERKKRPSVWTWMQKPRNAWSHYILAIHKGKEGHWILIKGVKMCDTFTEGQWTFVCDGPHRGCRIMEIFEVRRAID 155
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: UPI0003708454 (hypothetical protein n=2 Tax=Hyphomicrobium TaxID=81 RepID=UPI0003708454) HSP 1 Score: 184 bits (466), Expect = 1.130e-57 Identity = 80/101 (79.21%), Postives = 92/101 (91.09%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKRELE 303
TYADEVEGALA +G++M LK+++M RK+RP+VW WMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFT G+WTFV DGPHRGARIME+FEV++ LE
Sbjct: 65 TYADEVEGALAVYGFQMVLKETYMHLERKKRPTVWTWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTEGRWTFVVDGPHRGARIMEVFEVRKSLE 165
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: D8JYJ9_HYPDA (Uncharacterized protein n=4 Tax=Hyphomicrobium TaxID=81 RepID=D8JYJ9_HYPDA) HSP 1 Score: 182 bits (461), Expect = 6.330e-57 Identity = 81/98 (82.65%), Postives = 89/98 (90.82%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKR 294
TYADEVE ALA FGYRM LK++ + RARKERP++W WMQKPRNAWA+YILAIHKGKEGHWIL+KGVKMCDTFT GKWTFV DGPHRG RIMEIFEVK+
Sbjct: 64 TYADEVESALAHFGYRMVLKETHLHRARKERPTLWTWMQKPRNAWAYYILAIHKGKEGHWILVKGVKMCDTFTEGKWTFVVDGPHRGCRIMEIFEVKK 161
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: A0A7C2LS27_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LS27_9HYPH) HSP 1 Score: 180 bits (457), Expect = 2.570e-56 Identity = 76/100 (76.00%), Postives = 90/100 (90.00%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKREL 300
TY +EV ALA FGY M LK+S+MDR R+ERPS+W+WMQKPRNAWAHYILAIHKGKEGHW+LIKGVK+CDT++ G+W FVCDGPH+GARIME+FEV+R L
Sbjct: 66 TYTEEVAAALAHFGYTMQLKESYMDRPRRERPSLWSWMQKPRNAWAHYILAIHKGKEGHWVLIKGVKLCDTYSEGRWQFVCDGPHKGARIMEVFEVRRAL 165
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: F8JCH1_HYPSM (Uncharacterized protein n=6 Tax=Hyphomicrobium TaxID=81 RepID=F8JCH1_HYPSM) HSP 1 Score: 180 bits (456), Expect = 3.650e-56 Identity = 80/98 (81.63%), Postives = 88/98 (89.80%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKR 294
TY+DEVE ALA FGYRM LK+S M RARKERP+ W WMQKPR+AWA+YILAIHKGKEGHWIL+KGVKMCDTFT GKWTFV DGPHRG RIMEIFEV++
Sbjct: 64 TYSDEVEAALAYFGYRMELKESHMHRARKERPTFWTWMQKPRSAWAYYILAIHKGKEGHWILVKGVKMCDTFTEGKWTFVVDGPHRGCRIMEIFEVRK 161
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Match: A0A6N6T0G1_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T0G1_9HYPH) HSP 1 Score: 179 bits (453), Expect = 1.110e-55 Identity = 77/101 (76.24%), Postives = 88/101 (87.13%), Query Frame = 1
Query: 1 TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILAIHKGKEGHWILIKGVKMCDTFTAGKWTFVCDGPHRGARIMEIFEVKRELE 303
TY +EV ALA FGYRM LKQSFM RKERPS+W WMQKPR+AW HYILAIHKGKEGHW+LIKGVK+CDT++ GKW FVCDGPH+GARIME+FEVK+ L+
Sbjct: 66 TYTEEVAAALAHFGYRMDLKQSFMHLPRKERPSIWAWMQKPRSAWVHYILAIHKGKEGHWVLIKGVKLCDTYSEGKWQFVCDGPHKGARIMEVFEVKKALD 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18265.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18265.1.1 >prot_P-wetherbeei_contig18265.1.1 ID=prot_P-wetherbeei_contig18265.1.1|Name=mRNA_P-wetherbeei_contig18265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp TYADEVEGALAAFGYRMSLKQSFMDRARKERPSVWNWMQKPRNAWAHYILback to top mRNA from alignment at P-wetherbeei_contig18265:2..310+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18265.1.1 ID=mRNA_P-wetherbeei_contig18265.1.1|Name=mRNA_P-wetherbeei_contig18265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig18265:2..310+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18265:2..310+ >mRNA_P-wetherbeei_contig18265.1.1 ID=mRNA_P-wetherbeei_contig18265.1.1|Name=mRNA_P-wetherbeei_contig18265.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig18265:2..310+ (Phaeothamnion wetherbeei SAG_119_79)back to top |