mRNA_P-wetherbeei_contig18253.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: A0A2D7F786_9HYPH (Lipopolysaccharide biosynthesis protein n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7F786_9HYPH) HSP 1 Score: 385 bits (990), Expect = 2.330e-124 Identity = 207/404 (51.24%), Postives = 298/404 (73.76%), Query Frame = 1
Query: 46 EPDIQLATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSKRSNPFPEGNQRTSSPDS-TARLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQQQLEDNRTAV 1254
+ DI + LW +K L+GL+ + + +VTFG LSL+ PRY+SE+QL V+K +NPFP+G Q + T RLD+ AINTH AL++ DLLL+VAN+L L SR EF ++ GS ++L++ G+ P A + ++RVLS ++ +++V+A+ ++RFI IRF+S+D QL+A FAN LA+TYR SLV + V ET +V+DAL PK+ QL++EVL AE+ VE + A +DQFR+GPQSTPV QRMA L EL++AEA R+ +E++W++A +L R G+ + LP+VQ S ++QGLI QRVR+ERQ+AE+ A LL HPRM+QLN+D+ G++R I +V+K+V+G+EK R+A RV+ + K+I LK KVV + +EARL+ L+S A+SKR ELERLQ+QLEDN+T V
Sbjct: 9 QQDIDIFALWRGLKRSLRGLLTLTILVALVTFGVLSLMTPRYTSEAQLAIVAKTTNPFPDGKQTGGGREGLTQRLDREAINTHVNALMAPDLLLRVANQLDLRSRSEFGAS-GSNGIVQQVLQMVGLSQPEATGSTDDRVLSRVQERLQVSAVTDSRFIGIRFSSSDKQLAAKFANALAETYRKSLVEVLVNETKQVIDALVPKIEQLKREVLQAESQVERFLAETDQFRTGPQSTPVNTQRMAALNTELIKAEAERSIAESKWKSAVDLSRIGNVDELPEVQSSPVMQGLIDQRVRVERQVAEAQATLLAAHPRMKQLNSDLAGVKRSIRQQVQKIVRGLEKKYRTAAFRVQDIKKEIGGLKVKVVDTSEDEARLRSLESSAKSKRVELERLQRQLEDNKTLV 411
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: A0A2S5P4L0_HYPSQ (Lipopolysaccharide biosynthesis protein n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5P4L0_HYPSQ) HSP 1 Score: 382 bits (980), Expect = 2.750e-122 Identity = 206/400 (51.50%), Postives = 296/400 (74.00%), Query Frame = 1
Query: 52 DIQLATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSKRS-NPFPEGNQRTSSPDSTA-RLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQQQLEDNR 1245
DI + TLW ++K GL L + + G T+G LS++APRY+SE+QL V+K S +PF + + ++PDS + +D+ AINTH RAL+S DL ++A+++KL ++ EFNSA+GS+DT +LR+ G+ P GE+E++RVL + +EV + KE+RFI IRF+S++ L+A+ AN +A+TYR+SL SL V ET +V AL+PK+ +L K+V AEA VE +R +D+F GPQ T +++Q++ L EL R AR+E E R ++AREL +SGSAEVLPDVQ+S L+Q L+QQRVR ERQ+AE +A+LLPGHPRMQQLNAD+ GL+RQIT EV K+V+G+EK+A++A R ESV K ID LK+KVV G++ +L++L++ A+SKR+EL+RLQ Q E N+
Sbjct: 11 DIDIGTLWASLKRGLPRLFMLSALAGGATYGVLSMMAPRYTSEAQLSVVAKGSQSPFSDPKREGAAPDSVSVSVDKEAINTHVRALMSPDLARRIADDMKLNTKKEFNSALGSLDTVGSLLRLVGLAGPRPGESEQDRVLGAFFKSLEVYSPKESRFIGIRFSSSEPALAAEIANRIAETYRSSLTSLRVVETDEVQRALEPKIVELIKDVAGAEAEVERFRGQTDRFVGGPQRTALIEQQLGELTAELTRTSGARSEVEGRAKSARELLKSGSAEVLPDVQRSPLIQNLVQQRVRAERQLAELSASLLPGHPRMQQLNADLNGLKRQITGEVSKLVEGLEKEAKAAVNREESVKKSIDTLKSKVVNTGGDDVKLRQLEAAAKSKRSELDRLQSQFEANK 410
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: A0A7Y5CXD5_HYPSQ (Lipopolysaccharide biosynthesis protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CXD5_HYPSQ) HSP 1 Score: 343 bits (880), Expect = 6.600e-108 Identity = 191/407 (46.93%), Postives = 284/407 (69.78%), Query Frame = 1
Query: 31 HATYVEPDIQLATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSKRS-NPFPEGNQRTSSPDS-TARLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQQQLEDNR 1245
H T DI++++++ A+K L++ + +G +TF AL+ IAP+Y SE++L V++ S N FP+ + + PDS T ++D+ AINTH RAL S+DLL K+A ++ L +PEFN+A+G VD I+R+ G+G P AGE+E +RVL+ +R Q+EV + KE+RFI +R S D L+A AN +A+TYR++L S V E +Q K+ +L EV E V+ YR D ++ G Q+ + +Q+M+ L EL+RA+ R E+EAR ++A+E+ + GSA+ LPDVQKS L+Q L+QQRVR+ERQI+E +A+LLPGHPRMQQLNAD+ GL++Q+T EV K+V +EK+A+ A R +S+ K +D +K+KVV N EA+L++L++ A++KRTELE LQ QLE NR
Sbjct: 4 HPTASPDDIEMSSIFGALKRNASKLLLTSAVLGGLTFLALTQIAPKYQSEAELAIVARSSSNSFPDA-KGAAGPDSVTTKMDKEAINTHVRALRSTDLLAKIAEQMALKDKPEFNAAVGPVDKADSIMRLIGLGGPRAGESERDRVLNALRNQLEVYSAKESRFIGVRMTSIDPALAAKIANGVAETYRSTLASDSVVEIDDQQKVIQGKIEKLMPEVAAVETDVDRYRREIDSYKGGSQNIGLNEQQMSELTAELVRAKGTRGEAEARAKSAKEMMKLGSADALPDVQKSPLIQNLVQQRVRIERQISELSASLLPGHPRMQQLNADLAGLKKQLTGEVNKLVDSLEKEAKVAQGREDSIKKSLDDIKSKVVTNAPEEAKLRQLEANAKAKRTELENLQTQLEGNR 409
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: A0A1I7NDA6_9HYPH (Uncharacterized protein involved in exopolysaccharide biosynthesis n=3 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NDA6_9HYPH) HSP 1 Score: 332 bits (852), Expect = 1.520e-103 Identity = 188/403 (46.65%), Postives = 275/403 (68.24%), Query Frame = 1
Query: 28 PHATYVEPDIQLATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSK-RSNPFPEGNQRTSSPDS-TARLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQQQ 1230
P A +IQ++T++ A+K + LV ++ +G +TF L ++APRY SE++L V+K S+ F + +S PD T R+D+ AINTH RAL SSDL+L++AN+LKL RPEFNSA+G VD +LR+ GIG P +GE+E +RV+S +R ++EV KE+RFI IR S D +L++ AN +A+ YR SL V E + L+ K+ +L EV AE ++ YR D FR G Q+T + +Q+M+ L EL RA+AAR E++AR +ARE+ ++G+A+ L DVQKS L+Q L+QQRVR+ERQI+E +A LLP HPRM+QLNAD+ GL+ QI +E+ K+V +EK+A+ A R S+ + + +K +VV N EA+L++L++ A++KRTELE LQ Q
Sbjct: 3 PRAPASPDEIQMSTVFDALKRKGRWLVPLSVVLGGLTFVVLMMMAPRYQSEAELAIVAKGASSTFSDPRSASSGPDLVTTRMDKEAINTHVRALQSSDLMLQIANDLKLAERPEFNSALGPVDQLDAVLRMIGIGGPRSGESERDRVMSALRSRLEVYTAKESRFIGIRMTSIDAELASKIANAMAENYRASLAEQGVTEIDDLQTVLKAKIDKLGAEVATAETEIDRYRGKIDGFRGGAQNTGLNEQQMSDLTAELSRAKAARGEADARAASAREMMKAGTADALADVQKSPLIQNLVQQRVRIERQISELSATLLPAHPRMRQLNADLAGLKLQIDSEISKIVSSLEKEAKVAQGRESSIAQSLADIKNRVVTNAPEEAQLRQLEANAKAKRTELENLQAQ 405
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: N0BD33_9HYPH (Lipopolysaccharide biosynthesis protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 TaxID=670307 RepID=N0BD33_9HYPH) HSP 1 Score: 332 bits (851), Expect = 1.730e-103 Identity = 190/399 (47.62%), Postives = 265/399 (66.42%), Query Frame = 1
Query: 52 DIQLATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSKRSN-PFPEGNQRTSSPDSTARLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQQQLEDNR 1245
DI +A+++ A+K + L+ +L G +T+ ALSL+APRY SE++L V+K + F + N T T R+D+ AINTH RA+ S +LL K+A +LKL RPEFN A+G VD LR+ GIG P GET +RVL +R ++EV A KE+RFI +R S D +L+A AN LA+ YR SL V E + LQ KV +L EV AE V+ YR D FR G Q+T + +Q+M+ L EL +A+AAR E+E R ++ARE+ GSA+ L DVQKS L+Q L+QQRVR+ERQI+E +A LLPGHPRM+QLNAD+ GL+ QI E+ K+V +EK+A A R +S+ + + +K +VV N EA+L++L++ A++KRTEL+ +Q QLE NR
Sbjct: 11 DIDMASVFGALKRSARWLIPLSLVFGGLTYAALSLVAPRYQSEAELAIVAKGAGGTFADRNAATGPDLITTRMDKEAINTHVRAMQSQELLEKIAKDLKLAERPEFNGALGPVDKLDAALRLVGIGGPRKGETTRDRVLDALRSRLEVYAAKESRFIGVRVTSNDPELAAKIANALAENYRASLAEQGVTEVDDLQAVLQAKVQKLTTEVAAAETEVDRYRGKIDGFRGGAQNTGLNEQQMSELTAELTKAKAARGEAEVRAKSAREMIALGSADQLADVQKSPLIQNLVQQRVRIERQISELSATLLPGHPRMRQLNADLAGLKVQIDKEISKIVDSLEKEAAVAKGREDSIAQSLADIKARVVTNAPEEAQLRQLEATAKAKRTELDNIQAQLESNR 409
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: A0A109BJ39_HYPSL (Wzz domain-containing protein n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109BJ39_HYPSL) HSP 1 Score: 327 bits (838), Expect = 5.870e-102 Identity = 188/408 (46.08%), Postives = 272/408 (66.67%), Query Frame = 1
Query: 34 ATYVEPDIQLATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSKRSNPFPEGNQRTSSPDSTA-RLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQQQLEDNRTAV 1254
AT DI + +W ++K + LV+ +L G +T+ LS PRY+SE+Q++ V+ R + N S +S A RLD+ AINTH R+LLS DL L++ E KL PEFN AIG+ RI G+G + E+E++RVL +++V + +E+R I IRF S+D L+A+ AN +A+ YRTSL + + ET +V ALQPK+ +L EV D+EAAVE +RA +D F+ GP +T + Q++ L EL RA+AAR+E++AR ++ RE+ R+G+AE LPDVQ+S L+Q L+QQRVR+ERQ++E +A LLP HPRM+QL AD+ GL RQI +EV K+V+GIEK A A R SV + ++ +K + G +E +L++L+++ARSKR ELERLQ + E NR A
Sbjct: 2 ATAAPDDIDIGAIWRSLKRAMPKLVLLSLLTGALTYAVLSQFPPRYTSEAQIQVVAPR-----DANGADRSAESVASRLDREAINTHLRSLLSPDLALQIIAEEKLDKNPEFNDAIGTPGLLQRIKNAVGLGGTDS-ESEQDRVLKAFNSRLDVYSPRESRVIGIRFTSSDPALAAEVANRIAEAYRTSLATRSLSETDEVQQALQPKIDKLMNEVSDSEAAVEKFRAKADIFKGGPNNTGLNQQQLGDLNTELTRAQAARSEADARAQSVREMVRAGNAESLPDVQRSPLIQNLVQQRVRVERQLSELSATLLPAHPRMRQLRADLQGLERQIKSEVGKIVEGIEKGASIAASREASVRRSLEQVKKETAGTGEDEVQLRQLEAVARSKRAELERLQARYESNRIAA 403
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: D8JX58_HYPDA (Lipopolysaccharide biosynthesis protein n=4 Tax=Hyphomicrobium TaxID=81 RepID=D8JX58_HYPDA) HSP 1 Score: 328 bits (840), Expect = 1.310e-101 Identity = 188/408 (46.08%), Postives = 268/408 (65.69%), Query Frame = 1
Query: 7 FKTQAVSPHATYVEPD-IQLATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSKRSNPFPEGNQRTSSPDS-TARLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQ 1224
F V + PD I L +++ A K L+ L+ AL G +T+G LSLIAPRY SE++L ++K ++ + PD T R+D+ AINTH RA+ S +LL K+A +LKL RPEFN+A+G VD ++R G+G P GET +RVL +R ++EV + KE+RFI +R S D +L+A AN LA+ YRTSL + V E + LQ KV +L EV DAE AV+ YR D FR G Q+T + +Q+M+ L EL +A+AAR E++ R ++ARE+ GSA+ L DVQKS L+Q L+QQRVR+ERQI+E +A LLPGHPRM+QLNAD+ GL+ QI E+ K+V +EK+A A R +S+ + + +K +VV N EA+L++L++ A++KRTEL+ +Q
Sbjct: 15 FDLSKVMQSRVHASPDDIDLGSVFGAFKRSLRWLIPLALLFGGLTYGVLSLIAPRYQSEAELAIIAKGADGTFADRNASGGPDLITTRMDKEAINTHVRAMQSQELLEKIAKDLKLEDRPEFNNALGPVDRLDAMMRAVGLGGPRKGETTRDRVLDALRARLEVYSAKESRFIGVRVTSNDPELAAKIANALAENYRTSLAAHGVTEVDDLQSVLQGKVQKLTTEVADAETAVDRYRGKIDGFRGGAQNTGLNEQQMSELTAELTKAKAARGEADVRAKSAREMITLGSADQLADVQKSPLIQNLVQQRVRIERQISELSATLLPGHPRMRQLNADLAGLKVQIGKEIAKIVDSLEKEAAVAKGREDSIAQSLADIKARVVTNAPEEAQLRQLEATAKAKRTELDNIQ 422
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: UPI000380428A (GumC family protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI000380428A) HSP 1 Score: 327 bits (839), Expect = 1.370e-101 Identity = 185/399 (46.37%), Postives = 270/399 (67.67%), Query Frame = 1
Query: 52 DIQLATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSKRSN-PFPEGNQRTSSPDSTARLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQQQLEDNR 1245
DI L +LW + L + A+ T+G L+LIAPRY SE+QL SK +N PF + + ++ + R+D+ AINTH RAL+S+DL + ++KL PEFNSA GS D S +LR+ GIGAP A E++++R L+ ++EV + KE+RFI +RF S + +L+A AN +A+TYR +L + ET V AL+PK+A+L +E AEAAVE +R ++ F+ G Q+T + +Q++A L EL + +AAR+E+EAR + ARE+ GSAE L DVQKS L+Q L+Q RVR+ERQI+E +A LLPGHPRM+QL AD+ GL+ QI AEV K+V G+ K+A+ A +R E++ + + +KT++V EA+L+ L++ A+SKR EL+RL+ Q E NR
Sbjct: 11 DIDLRSLWQTAIRSVPRLALLAVVTAAATYGVLTLIAPRYVSETQLAIESKSTNNPFADPTRSGANDSVSVRMDKEAINTHVRALMSTDLGETIVRDMKLADLPEFNSARGSPDMLSALLRLVGIGAPRASESDQDRALTAYFNRLEVYSPKESRFIGVRFWSNNPELAAAVANRIAETYRENLARQSISETDDVQKALEPKIAKLAEEAAVAEAAVEKFRGEANIFKGGQQATGLNEQQLAELNAELSKVKAARSEAEARAKQAREMQELGSAETLADVQKSPLIQNLVQSRVRVERQISELSATLLPGHPRMRQLQADLKGLKTQIAAEVAKIVDGMGKEAKVAALREEAIQRNVSEIKTRIVTAGPEEAKLRSLEADAKSKRAELDRLRAQYEANR 409
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: A0A6I0EGG5_HYPSQ (Polysaccharide biosynthesis tyrosine autokinase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EGG5_HYPSQ) HSP 1 Score: 326 bits (835), Expect = 1.560e-101 Identity = 188/402 (46.77%), Postives = 278/402 (69.15%), Query Frame = 1
Query: 52 DIQLATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSKRSNPFPEGNQRTSSPDSTA-RLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQQQLEDNRTAV 1254
DI ++ +W +++ L L++ +L G +T+ LS PRY+SE+Q++ V+ + +GN RT DS A RLD+ AINTH R+LLS DL L++ +E KL PEFN A+ RILR IG E+E++RVL ++EV + KE+R I I+F S+D +L+A+ AN +A+TYRT L + + ET +V ALQPK+ +L KEV +AEAAVE +RA ++ F+ GP +T + Q++A L EL +A+AAR+E++AR ++ RE+ R+G+AE LPDVQ+S L+Q L+QQRVR+ERQ++E +A LLP HPRM+QL AD+ GL+RQI +EV K+V+GIEK A A R +V + ++A+K +VVG +E +L++L+++A+SKR ELERLQ + E NR
Sbjct: 8 DIDISAVWRSLRRALPKLIVLSLITGGITYAVLSQFPPRYTSEAQIQVVAPK-----DGNDRTF--DSVAARLDKEAINTHLRSLLSPDLALQIISEEKLDKNPEFNDALQPPSKLDRILRALDIGTRNE-ESEQDRVLKAFFSRLEVYSPKESRVIGIQFTSSDPKLAAEVANRIAETYRTLLATRTLSETDEVQKALQPKIDKLVKEVAEAEAAVERFRAQANIFKGGPNNTGLNQQQLADLNAELTKAQAARSEADARAQSVREMVRAGNAEALPDVQRSPLIQNLVQQRVRVERQLSELSATLLPAHPRMRQLRADLEGLQRQIKSEVGKIVEGIEKSASIAASREAAVRQSLEAMKKQVVGTGDDEVQLRQLEAVAKSKRAELERLQARFEANRVTA 401
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Match: UPI001FD8A3A7 (lipopolysaccharide biosynthesis protein n=1 Tax=Hyphomicrobium sp. 99 TaxID=1163419 RepID=UPI001FD8A3A7) HSP 1 Score: 325 bits (834), Expect = 5.960e-101 Identity = 185/392 (47.19%), Postives = 270/392 (68.88%), Query Frame = 1
Query: 61 LATLWLAIKNGLKGLVIAALAIGVVTFGALSLIAPRYSSESQLEFVSK-RSNPFPEGNQRTSSPDS-TARLDQAAINTHARALLSSDLLLKVANELKLPSRPEFNSAIGSVDTWSRILRIAGIGAPAAGETEEERVLSVIRRQIEVAAMKETRFIAIRFNSTDGQLSADFANLLADTYRTSLVSLPVEETSKVVDALQPKVAQLRKEVLDAEAAVESYRASSDQFRSGPQSTPVVDQRMAGLQEELLRAEAARNESEARWRTARELHRSGSAEVLPDVQKSVLVQGLIQQRVRLERQIAESAAALLPGHPRMQQLNADVGGLRRQITAEVEKVVQGIEKDARSATIRVESVTKQIDALKTKVVGNTGNEARLKELDSLARSKRTELERLQQQ 1230
++T++ A+K+ + LV ++A+G VTFG L+++APRY SE +L V+K S+ F + ++S PD T R+D+ AINTH RAL S DL+ ++AN+LKL R EFNSA+G VD LR+ GIG P +GE+E +RV+S R ++EV KE+RFI +R S D L+A AN LA+ YR+SL V E + L+ K+ +L EV +AE ++ YR D FR G Q+T + +Q+M+ L EL RA+ AR E+EAR +ARE+ ++G+A+ L DVQKS L+Q L+QQRVR+ERQI+E +A LLPGHPRM+QLNAD+ GL+ QI +E+ K+V +EK+A+ A R S+ + + +K +VV N EA+L++L++ A++KRTELE +Q Q
Sbjct: 1 MSTVFGALKSKSRWLVPLSIALGGVTFGVLTMMAPRYQSEVELAIVAKGASSTFSDPRSQSSGPDLVTTRMDKEAINTHVRALQSPDLMQQIANDLKLNERREFNSALGPVDQLDAALRMIGIGGPRSGESERDRVMSAFRSRLEVYTAKESRFIGVRMTSLDPALAAKIANALAENYRSSLAEQGVTEIDDLQTVLKAKIDKLSAEVANAETEIDRYRGKIDGFRGGSQNTGLNEQQMSDLTAELTRAKTARGEAEARAASAREMMKAGAADALADVQKSPLIQNLVQQRVRIERQISELSATLLPGHPRMRQLNADLAGLKLQINSEIGKIVASLEKEAKVAQGRETSIAQSLADIKARVVTNAPEEAQLRQLEANAKAKRTELENIQAQ 392 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18253.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18253.1.1 >prot_P-wetherbeei_contig18253.1.1 ID=prot_P-wetherbeei_contig18253.1.1|Name=mRNA_P-wetherbeei_contig18253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=418bp MPFKTQAVSPHATYVEPDIQLATLWLAIKNGLKGLVIAALAIGVVTFGALback to top mRNA from alignment at P-wetherbeei_contig18253:99..1352+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18253.1.1 ID=mRNA_P-wetherbeei_contig18253.1.1|Name=mRNA_P-wetherbeei_contig18253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1254bp|location=Sequence derived from alignment at P-wetherbeei_contig18253:99..1352+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18253:99..1352+ >mRNA_P-wetherbeei_contig18253.1.1 ID=mRNA_P-wetherbeei_contig18253.1.1|Name=mRNA_P-wetherbeei_contig18253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1254bp|location=Sequence derived from alignment at P-wetherbeei_contig18253:99..1352+ (Phaeothamnion wetherbeei SAG_119_79)back to top |