mRNA_P-wetherbeei_contig18229.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: D8LG74_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG74_ECTSI) HSP 1 Score: 137 bits (346), Expect = 1.090e-35 Identity = 74/132 (56.06%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 4 VVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCKFHLNLTE--------------GGLSHPDG--VQDIEEL---GKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTVKV 342
V ELK TVYRPRLSLLGSR+QLCVHE VS MKG N+AC ALVK RRCK+H + PD V DIEEL K+ FCPYY GRG A +A+LVLMPYNYLLDP RR +K+
Sbjct: 90 VANELKNTVYRPRLSLLGSRDQLCVHEEVSQMKGGAKNHACSALVKARRCKYHRGTEDMVERAGXXXXXXXXXXXXPPDQSTVPDIEELVSLAKKHEFCPYYLGRGHAPRAELVLMPYNYLLDPGTRRGIKI 221
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: A0A836CNR1_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR1_9STRA) HSP 1 Score: 130 bits (327), Expect = 9.990e-33 Identity = 65/116 (56.03%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 4 VVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCKFHLNLTEGGLSHPDGVQDIEEL---GKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTVKV 342
V RELK T YRPRL+LLGSREQLCVH+ ++ ++G +N AC AL R C H L G D V DIEEL G+ + FCPYY RG AA ADLVLMPYNYLLD + RR +++
Sbjct: 120 VARELKSTAYRPRLALLGSREQLCVHKEIAQLRGGQLNAACQALASRRACAHHRALDAGAGPPADAVLDIEELAARGRAEGFCPYYLSRGAAADADLVLMPYNYLLDAAARRALRL 235
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: A0A482SMY5_9ARCH (Helicase ATP-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMY5_9ARCH) HSP 1 Score: 122 bits (306), Expect = 1.170e-30 Identity = 57/120 (47.50%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 4 VVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCKFHLNLTE--GGLSH--PDGVQDIEEL---GKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTVKV 342
V+REL+ T YRP++++LGSREQLC+H+ VS +KG+ +N+AC L R C++ NL G + H + V DIE+L G+R+ CPY+Y R +A AD++ MPYNYLLD S+R+T ++
Sbjct: 113 VIRELQSTAYRPKMAVLGSREQLCIHDKVSKLKGSAINHACTTLTTQRGCRYRNNLDSDNGSVIHVSQEEVVDIEDLALIGRRKAICPYFYSRDMSANADIIFMPYNYLLDASIRKTTRI 232
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: A0A7S3ZF91_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZF91_9EUKA) HSP 1 Score: 112 bits (281), Expect = 3.580e-29 Identity = 51/109 (46.79%), Postives = 71/109 (65.14%), Query Frame = 1
Query: 22 RTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCKFHLNLTEGGLS-HPDGVQDIEEL---GKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTV 336
+T Y+P +S+LGSR+Q+CVH VS G N+AC L RRCKF+ N HP GV DIE+L G+++ CPY+Y RG + A+++ MPYNYL+DP +R T+
Sbjct: 1 KTSYKPNISILGSRQQMCVHPQVSQETGTQQNHACRTLTASRRCKFYNNADRVSRDPHPGGVMDIEDLVHMGQQEEVCPYFYSRGMSKSAEVIFMPYNYLVDPKIRNTL 109
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: A0A6A7G9Z9_9CRUS (Regulator of telomere elongation helicase 1 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G9Z9_9CRUS) HSP 1 Score: 113 bits (283), Expect = 5.640e-27 Identity = 49/116 (42.24%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 4 VVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCKFHLNLTE-----GGLSHPDGVQDIEELGKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTV 336
VV+ELK + YRP++++LGSR Q+C+H +S + G N+AC +LV + C FH NL + L ++D+ ++G ++ FCPYYY R ++L+LMPYNYL+DP +R+T+
Sbjct: 134 VVKELKASKYRPKMAILGSRSQMCIHPEISKLFGTRQNHACRSLVSKKACCFHKNLADLDEIDAELDTVLDIEDLVQIGTKREFCPYYYSRKSLEVSELILMPYNYLIDPKIRKTL 249
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: W7U1C1_9STRA (DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1C1_9STRA) HSP 1 Score: 113 bits (283), Expect = 9.370e-27 Identity = 61/121 (50.41%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 4 VVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCKFHLNLTEGGLSH----PDGVQDIEEL---GKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTVKVR 345
V+RELK T YRP +LGSREQLCVH VS +KG N CG L + R C++ NL H GV DIEEL G+ + CPYY R ADLVLMPYNYLLD R+ +VR
Sbjct: 134 VIRELKATGYRPHTVILGSREQLCVHPEVSKLKGGLQNRRCGVLTQSRACRYKNNLDSYQAEHVGGGSPGVMDIEELKSLGQTKLVCPYYLMRQNTLHADLVLMPYNYLLDAGSRQPYQVR 254
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: A0A8J5XLP4_DIALT (Helicase ATP-binding domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XLP4_DIALT) HSP 1 Score: 113 bits (282), Expect = 1.260e-26 Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 4 VVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCKFHLNL-----TEGGLSHPDGVQDIEE---LGKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTV 336
VV ELKRTVYRP++ + GSREQ CVH VS ++G + +AC L K CK+H NL + GG+ GV DIEE L + + CP++Y R A A+++L+PYNYL+DP RR +
Sbjct: 114 VVSELKRTVYRPKMCVFGSREQSCVHADVSELRGLALTHACQTLTKANGCKYHANLMRQKASPGGVPVHPGVLDIEEFSALCRAKELCPFFYARELQADAEVLLVPYNYLIDPKSRRAL 232
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: A0A7S0QM79_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QM79_9CRYP) HSP 1 Score: 109 bits (272), Expect = 2.170e-26 Identity = 54/116 (46.55%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 4 VVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCKFHLNLTEGGLSHP--DGVQDIEEL---GKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTV 336
V+REL+ T YRPR+S+LGSR+QLCVH VS ++GA N AC LV + C +H + E G+ DIE+L G++Q CPY+ R A +A+++ MPYNYL D + RRT+
Sbjct: 81 VIRELRSTAYRPRISVLGSRQQLCVHPEVSKLRGAAQNCACQKLVAAKACLYHSRVMEHKYERDIAGGLLDIEDLCKHGQQQKVCPYFLSRELANEAEVIFMPYNYLTDTASRRTL 196
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: A0A453EZX4_AEGTS (Helicase ATP-binding domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453EZX4_AEGTS) HSP 1 Score: 104 bits (260), Expect = 4.500e-26 Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 4 VVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCK-------FHLNLTEGGLSHPDGVQDIEELGKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTV 336
V++ELK T YRP++++LGSREQ+C+HE VS ++G NN C L K R C+ + N TE G S P ++D+ +G+ + CPYY R + D++ PYNYL+DP RR++
Sbjct: 31 VIKELKATSYRPKMAVLGSREQMCIHEEVSKLRGKAQNNGCHYLCKKRLCRHNNIVTDYMKNNTELG-SEPFDIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSL 147
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Match: A0A5J4YHK1_PORPP (Regulator of telomere elongation helicase 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHK1_PORPP) HSP 1 Score: 111 bits (277), Expect = 5.950e-26 Identity = 52/121 (42.98%), Postives = 76/121 (62.81%), Query Frame = 1
Query: 1 KVVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRCKFH--------LNLTEGGLSHPDGVQDIEELGKRQTFCPYYYGRGEAAQADLVLMPYNYLLDPSLRRTVK 339
KVV EL+ T YRPRLS+LGSREQ C+HETVS +KG M + C +V R+C + N TE + ++++ ++G+ CPYY R +A+++L+PYNYL+DPS+R +K
Sbjct: 169 KVVSELRNTSYRPRLSVLGSREQTCIHETVSKLKGPMMRHECRKIVSQRKCSYRNAVDGEAGKNATEEAIVGMADIEELVDIGRSHRACPYYLSRKIEKEAEIILLPYNYLIDPSVRDALK 289 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18229.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18229.1.1 >prot_P-wetherbeei_contig18229.1.1 ID=prot_P-wetherbeei_contig18229.1.1|Name=mRNA_P-wetherbeei_contig18229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp KVVRELKRTVYRPRLSLLGSREQLCVHETVSTMKGAGMNNACGALVKGRRback to top mRNA from alignment at P-wetherbeei_contig18229:185..1159+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18229.1.1 ID=mRNA_P-wetherbeei_contig18229.1.1|Name=mRNA_P-wetherbeei_contig18229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig18229:185..1159+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18229:185..1159+ >mRNA_P-wetherbeei_contig18229.1.1 ID=mRNA_P-wetherbeei_contig18229.1.1|Name=mRNA_P-wetherbeei_contig18229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig18229:185..1159+ (Phaeothamnion wetherbeei SAG_119_79)back to top |