mRNA_P-wetherbeei_contig18129.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: UPI0019C00566 (DeoR/GlpR transcriptional regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019C00566) HSP 1 Score: 215 bits (548), Expect = 5.350e-68 Identity = 115/152 (75.66%), Postives = 129/152 (84.87%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNV 456
GTTTSIFARELL+KRNLTV+TNSSDIARTLATVNGNRVYMAGGELNG NG AFGPSAI FA SF VR AII+IGALDA FGPSD+YLAEAEFARMVLSRGE R+I++D+SKFGR ALIKVCDF ++ +I++ P A LAA L A V +
Sbjct: 101 GTTTSIFARELLRKRNLTVITNSSDIARTLATVNGNRVYMAGGELNGDNGGAFGPSAIQFAQSFRVRFAIITIGALDAAFGPSDNYLAEAEFARMVLSRGERRIIVTDSSKFGRTALIKVCDFDMVDCIISEAPPPAGLAAALAAANVKCEI 252
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: A0A847ZYS5_9HYPH (DeoR/GlpR transcriptional regulator n=1 Tax=Phyllobacteriaceae bacterium TaxID=1871068 RepID=A0A847ZYS5_9HYPH) HSP 1 Score: 193 bits (490), Expect = 4.070e-59 Identity = 103/152 (67.76%), Postives = 118/152 (77.63%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNV 456
GTTTSIFA+EL +R LTVVTNSSDIARTLATVNGNRVYMAGGEL NGAAFGP A+ F + F VRH+ ISI AL A GP D EAE ARM LSR + R+ILSD++KFG+ AL+KVCDF +IN+LITDG P A LA L +AGV+V V
Sbjct: 103 GTTTSIFAQELRNRRGLTVVTNSSDIARTLATVNGNRVYMAGGELKADNGAAFGPPAVEFISRFRVRHSFISIAALHAVDGPMDMAFEEAELARMALSRSDNRIILSDSTKFGKTALVKVCDFSEINQLITDGAPPADLAMALDKAGVAVTV 254
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: A0A2N6AZZ8_9HYPH (DeoR/GlpR transcriptional regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2N6AZZ8_9HYPH) HSP 1 Score: 182 bits (461), Expect = 9.340e-55 Identity = 97/152 (63.82%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNV 456
GTTTSI ARELL K LT+VTNSSD+ARTL+TVNGNRVYMAGGEL+G NGAAFG SAIAF A F VRHAIISI A+DAD G D +LAEAEFAR VLS G+ R++++D +KF R AL++V F + +RL+TD P +A L+ AG V +
Sbjct: 101 GTTTSILARELLGKTGLTIVTNSSDVARTLSTVNGNRVYMAGGELHGDNGAAFGRSAIAFIADFRVRHAIISIAAMDADLGLMDYHLAEAEFARTVLSCGQERIVITDHTKFNRAALVRVAGFDEFDRLVTDRAPPDDIAEKLRHAGTRVEI 252
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: A0A1L3STN7_9HYPH (DeoR family transcriptional regulator n=1 Tax=Aquibium oceanicum TaxID=1670800 RepID=A0A1L3STN7_9HYPH) HSP 1 Score: 179 bits (454), Expect = 9.220e-54 Identity = 96/152 (63.16%), Postives = 115/152 (75.66%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNV 456
GTTTSI AREL +R LT+VTNSSDIARTLATVNGN+V+MAGGEL+G NGAAFG +AI F A F VRHAIISIGA+DA GP D L EAEFARM L GE R+I +D +KFGR AL+KVC F D + L++D P ++A ++ AG + V
Sbjct: 100 GTTTSILARELSARRELTIVTNSSDIARTLATVNGNKVFMAGGELHGDNGAAFGRTAIDFIARFRVRHAIISIGAVDAALGPMDYLLEEAEFARMALQCGERRIIATDHTKFGRAALVKVCGFGDFDLLVSDRAPPGEIAEAIEAAGATWEV 251
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: A0A3R9Y463_9HYPH (DeoR/GlpR transcriptional regulator n=2 Tax=Aquibium carbonis TaxID=2495581 RepID=A0A3R9Y463_9HYPH) HSP 1 Score: 179 bits (454), Expect = 9.780e-54 Identity = 98/154 (63.64%), Postives = 115/154 (74.68%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNVVA 462
GTTTSI AREL +R LT+VTNSSD+ARTLATVNGN+V+MAGGEL+G NGAAFG +AI FAA F VRHAIISIGA+DA GP D L EAEFAR VLS G+ R++ +D +KF R AL+KVCDF D + L+ D P A +A L AG V A
Sbjct: 102 GTTTSILARELAARRELTIVTNSSDVARTLATVNGNKVFMAGGELHGDNGAAFGRTAIDFAARFRVRHAIISIGAIDARMGPMDYLLEEAEFARTVLSCGDNRILATDHTKFDRSALVKVCDFADFDLLVADRPPPAAIADALGAAGGRFEVAA 255
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: A0A7G6S9A1_9HYPH (DeoR/GlpR transcriptional regulator n=1 Tax=Phyllobacterium sp. 628 TaxID=2718938 RepID=A0A7G6S9A1_9HYPH) HSP 1 Score: 178 bits (452), Expect = 1.910e-53 Identity = 94/154 (61.04%), Postives = 117/154 (75.97%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNVVA 462
GTTTS ARELL+ R+LTVVTNSSDIARTLATVNGN+V+MAGGEL NGAAFG A+ F + F+V H++ISIGA+DA G D L EAEFARMVLSRGE ++++DASKFGR L++VCDF + L+TD P ++A L AG+ V++ A
Sbjct: 99 GTTTSFLARELLQYRSLTVVTNSSDIARTLATVNGNKVFMAGGELRSDNGAAFGALAVDFISRFNVAHSVISIGAIDATHGLMDYNLEEAEFARMVLSRGERSIVVTDASKFGRQGLVQVCDFTGFDELVTDMAPSGDISASLHHAGIQVSIAA 252
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: A0A839STX3_9HYPH (DeoR family glycerol-3-phosphate regulon repressor n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839STX3_9HYPH) HSP 1 Score: 177 bits (448), Expect = 7.230e-53 Identity = 97/153 (63.40%), Postives = 116/153 (75.82%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNVV 459
GTTTSI ARELL K+ L +VTNSSD+AR LATVNGN+VYMAGGEL+G NGAAFG SAI F ++F VR AIISIGA+DA GP D LAEAEFAR VL G+ R++++D SKF R AL+KVCDF++ + L+TD P +A L AG V VV
Sbjct: 100 GTTTSILARELLAKKRLIIVTNSSDVARILATVNGNKVYMAGGELHGDNGAAFGRSAIDFISNFKVRFAIISIGAIDARVGPMDFRLAEAEFARRVLECGDERLVITDHSKFQRSALVKVCDFEEFDHLVTDVPPPEDIAKRLTAAGTKVTVV 252
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: A0A7Y2BR14_9HYPH (DeoR/GlpR transcriptional regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2BR14_9HYPH) HSP 1 Score: 177 bits (448), Expect = 1.110e-52 Identity = 96/152 (63.16%), Postives = 112/152 (73.68%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNV 456
GT+TSI ARELL KRNLTV+TNSSDIARTLATVNGN V+MAGG+L G NGAAFG SA+ F F VRHAI+SIGA+DA+ GP D EAEFA VL +GE I++D +KFGR L+KVCDF DI+ LITD P + L +A V V V
Sbjct: 107 GTSTSILARELLTKRNLTVITNSSDIARTLATVNGNTVFMAGGQLRGDNGAAFGSSAVEFICKFRVRHAIVSIGAIDAETGPMDIDFGEAEFANAVLRQGECAAIITDHTKFGRAGLVKVCDFTDIHTLITDQPPPGDIMDKLLQAQVDVVV 258
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: A0A1H0LG84_9HYPH (Transcriptional regulator, DeoR family n=5 Tax=Phyllobacterium TaxID=28100 RepID=A0A1H0LG84_9HYPH) HSP 1 Score: 176 bits (446), Expect = 1.630e-52 Identity = 98/152 (64.47%), Postives = 112/152 (73.68%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNV 456
GTTTS ARELL+ RNLTVVTNSSDIARTLATVNGN+V+MAGGEL NGAAFG AI F + F+V H+IISIGA+DA G D L EAEFARMVLSRGE V++SDASKFGR L++VCDF + L+TD P + L AG V V
Sbjct: 99 GTTTSFLARELLQYRNLTVVTNSSDIARTLATVNGNKVFMAGGELRSDNGAAFGALAIDFISRFNVAHSIISIGAIDATHGLMDYNLEEAEFARMVLSRGERSVVVSDASKFGRQGLVQVCDFTGFDELVTDSPPPDDVLQSLSRAGARVRV 250
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Match: A0A833M4L1_9HYPH (DeoR/GlpR transcriptional regulator n=1 Tax=Rhizobiaceae bacterium TaxID=1913961 RepID=A0A833M4L1_9HYPH) HSP 1 Score: 175 bits (444), Expect = 3.270e-52 Identity = 97/152 (63.82%), Postives = 114/152 (75.00%), Query Frame = 1
Query: 1 GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGAAFGPSAIAFAASFHVRHAIISIGALDADFGPSDSYLAEAEFARMVLSRGETRVILSDASKFGRIALIKVCDFKDINRLITDGIPDAKLAAVLQEAGVSVNV 456
GTTTS ARELL R LTVVTNSSDIARTLATVNGN+VYMAGGEL +GAAFG SAI F + F V HA+IS+GA+DA G D L EAEFARMVLSRG + ++D SKFGR L+KVCDF + L+TD P A++A L+EAGV++ V
Sbjct: 100 GTTTSYLARELLGHRRLTVVTNSSDIARTLATVNGNKVYMAGGELRSDSGAAFGVSAIEFVSRFSVTHAVISVGAVDAANGIMDYDLEEAEFARMVLSRGARAIAVTDHSKFGRHGLVKVCDFAVLGELVTDRAPPAEIATRLEEAGVTLTV 251 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18129.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18129.2.1 >prot_P-wetherbeei_contig18129.2.1 ID=prot_P-wetherbeei_contig18129.2.1|Name=mRNA_P-wetherbeei_contig18129.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp GTTTSIFARELLKKRNLTVVTNSSDIARTLATVNGNRVYMAGGELNGSNGback to top mRNA from alignment at P-wetherbeei_contig18129:907..1374- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18129.2.1 ID=mRNA_P-wetherbeei_contig18129.2.1|Name=mRNA_P-wetherbeei_contig18129.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig18129:907..1374- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18129:907..1374- >mRNA_P-wetherbeei_contig18129.2.1 ID=mRNA_P-wetherbeei_contig18129.2.1|Name=mRNA_P-wetherbeei_contig18129.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig18129:907..1374- (Phaeothamnion wetherbeei SAG_119_79)back to top |