mRNA_P-wetherbeei_contig18115.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: A0A3N5EY10_9BURK (Heme-binding protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5EY10_9BURK) HSP 1 Score: 145 bits (365), Expect = 3.710e-41 Identity = 90/145 (62.07%), Postives = 105/145 (72.41%), Query Frame = 1
Query: 1 RGSGAKPSEKIAMTAPVLVEPAARXXXXXXXXXXXXXXQGDSVSGMMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILVEVA 435
R SG SEKI MTAPV +E AA XXXXXXXXXX D++SG RW ++FTMP Y++ATLP+P + AV LREVPG R+AVLVFSGFTGE+KV+ T ELL W+ K R PQLARY+PPW LPFMRRNEI+V VA
Sbjct: 59 RASG---SEKIEMTAPVGIE-AAXXXXXXXXXXXAERQGSDALSG---EGRWTIRFTMPASYTLATLPRPDDAAVVLREVPGGRHAVLVFSGFTGEDKVRTNTAELLAWMGTKGMRPAGPPQLARYDPPWQLPFMRRNEIVVPVA 196
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: A0A258NDP8_9BURK (Uncharacterized protein n=4 Tax=unclassified Acidovorax TaxID=2684926 RepID=A0A258NDP8_9BURK) HSP 1 Score: 144 bits (364), Expect = 9.850e-41 Identity = 82/151 (54.30%), Postives = 105/151 (69.54%), Query Frame = 1
Query: 13 AKPSEKIAMTAPVLVEPAA-----------RXXXXXXXXXXXXXXQGDSVSGMMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILVEV 432
AK +EKIAMTAPV +EP + XXXXXXXXX G ++ + ++ WRV F MP +Y++ATLP+P+NPAVTLREVP K +AVL +SGF E VQQ+TDEL+ WL A+ + +PQLARYNPPWTLP RRNEI++E+
Sbjct: 63 AKGAEKIAMTAPVALEPVSPPPPSTXXXXXXXXXXXXXXXPASAQAGQALPALQGAQSWRVHFVMPAQYTLATLPRPKNPAVTLREVPAKTWAVLSYSGFNTEAIVQQRTDELVAWLAAQQIKTRGSPQLARYNPPWTLPMFRRNEIMLEI 213
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: UPI0004976C52 (heme-binding protein n=1 Tax=Polaromonas glacialis TaxID=866564 RepID=UPI0004976C52) HSP 1 Score: 144 bits (363), Expect = 1.950e-40 Identity = 86/141 (60.99%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 16 KPSEKIAMTAPVLVEPAARXXXXXXXXXXXXXXQGDSVSGMMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILVEVAA 438
K SEKIAMTAPV EP A XXXXXXXXXXXXXX S M + +WR+ F MP +YSM TLPKP N AV LR VP + +AVL +SGF +VQ+KTDEL +W+K+KN +A++ PQLARY+PPWTLP RRNEI +E+
Sbjct: 91 KASEKIAMTAPVTAEPVAXXXXXXXXXXXXXXXXXXXXS-MASATQWRIHFVMPSQYSMQTLPKPNNEAVKLRAVPARTFAVLSYSGFNTASRVQEKTDELALWMKSKNLQAVSVPQLARYDPPWTLPMWRRNEIQMEIKT 230
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: A0A2M8BS39_9BURK (Heme-binding protein n=2 Tax=unclassified Comamonadaceae TaxID=83494 RepID=A0A2M8BS39_9BURK) HSP 1 Score: 142 bits (358), Expect = 6.510e-40 Identity = 82/144 (56.94%), Postives = 105/144 (72.92%), Query Frame = 1
Query: 22 SEKIAMTAPVLVEPAARXXXXXXXXXXXXXXQGDSVSG-------MMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILVEV 432
SEKIAMTAPV +EP XXXXXXXXXXXX + S + + +WR+ F MP +Y++A+LPKP NPAVTLREVP K +AVL +SGF E ++Q+KTDEL+ WL + +A+ +PQLARYNPPWTLP RRNEI++E+
Sbjct: 66 SEKIAMTAPVTMEPLTNPSXXXXXXXXXXXXXXATQSANSTGLPALQGATQWRMHFVMPSQYTLASLPKPNNPAVTLREVPAKTWAVLRYSGFNTEARIQRKTDELVAWLAEQKIKALGSPQLARYNPPWTLPMFRRNEIMLEI 209
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: UPI000485F851 (heme-binding protein n=1 Tax=Dechloromonas agitata TaxID=73030 RepID=UPI000485F851) HSP 1 Score: 141 bits (356), Expect = 1.460e-39 Identity = 78/138 (56.52%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 22 SEKIAMTAPVLVEPAARXXXXXXXXXXXXXXQGDSVSGMMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILVEVA 435
+E+IAMT PV+ EP + XXXXXXXXXXXX + + M ++RWR+ F MP +Y++ATLPKP NPA+ LRE+P + YAVL +SG VQ++TD+LL WL+A+ I PQLARYNPPWTLPF+RRNEI E+
Sbjct: 75 NERIAMTVPVVAEPQDKAEXXXXXXXXXXXXXXAAATRMAGAQRWRIHFVMPSQYTLATLPKPLNPAIGLREIPARTYAVLTYSGSNTASTVQERTDQLLAWLQAQGIAPIGQPQLARYNPPWTLPFLRRNEIQQEIV 212
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: UPI001AEE7999 (heme-binding protein n=1 Tax=Thiothrix litoralis TaxID=2891210 RepID=UPI001AEE7999) HSP 1 Score: 139 bits (351), Expect = 3.640e-39 Identity = 81/135 (60.00%), Postives = 101/135 (74.81%), Query Frame = 1
Query: 22 SEKIAMTAPVLVEPAARXXXXXXXXXXXXXXQGDSVSGMMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILV 426
+EKI+MTAPV +E ++ XXXXXXXXXXX SG ++WR+ F MPGEY++ATLPKP NPAVTLRE+P YAV+ FSGF GEEK +KT LL WL++K + P+LARYNPPWTLPF+RRNE++V
Sbjct: 62 NEKISMTAPVTMEASSAXXXXXXXXXXX-------XSG----EQWRMHFVMPGEYTLATLPKPNNPAVTLREIPTSHYAVIRFSGFAGEEKTAKKTAALLAWLESKGIKPTGKPELARYNPPWTLPFLRRNEVMV 185
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: A0A254Q1B2_9BURK (Heme-binding protein n=2 Tax=Polynucleobacter aenigmaticus TaxID=1743164 RepID=A0A254Q1B2_9BURK) HSP 1 Score: 139 bits (351), Expect = 4.720e-39 Identity = 78/137 (56.93%), Postives = 98/137 (71.53%), Query Frame = 1
Query: 22 SEKIAMTAPVLVEPAARXXXXXXXXXXXXXXQGDSVSGMMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILVEV 432
SEKIAMTAPV +E + XXXXXXXXXXX G + +W V F MP EY++ TLPKP + V +REVP +R AV+ FSGF E+KVQ+KT L W+KA+N ++I PQ ARYNPPWTLPFMRRNE++++V
Sbjct: 58 SEKIAMTAPVGIESGDQSKSXXXXXXXXXXXXGPKSQDKSNQNQWTVSFVMPAEYTLNTLPKPLDSQVKIREVPSERRAVITFSGFYNEDKVQEKTQALQDWIKARNMKSIGEPQFARYNPPWTLPFMRRNEVMIQV 194
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: A0A7Y0BVZ9_9BURK (Heme-binding protein n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A7Y0BVZ9_9BURK) HSP 1 Score: 140 bits (352), Expect = 4.950e-39 Identity = 86/146 (58.90%), Postives = 102/146 (69.86%), Query Frame = 1
Query: 16 KPSEKIAMTAPVLVEPAARXXXXXXXXXXXXXXQGDSVS-------GMMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILVEV 432
K SEKIAMTAPV +EPA XXXXXXXXXXXXX + M +KRWRV F MP Y++ TLPKP N AV LREVP K +AVL +SGF E +QQ+TDEL+ WL A+ + +PQLARYNPPWTLP RRNEI++E+
Sbjct: 64 KGSEKIAMTAPVTMEPANAAXXXXXXXXXXXXXXXXNAGQASQMPQAMQGAKRWRVHFVMPSTYTLNTLPKPNNLAVQLREVPAKTWAVLSYSGFNTEAGIQQRTDELVAWLAAQKIKTTGSPQLARYNPPWTLPMFRRNEIMLEI 209
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: A0A1G8V9X4_9GAMM (SOUL heme-binding protein n=1 Tax=Microbulbifer yueqingensis TaxID=658219 RepID=A0A1G8V9X4_9GAMM) HSP 1 Score: 139 bits (351), Expect = 6.270e-39 Identity = 81/135 (60.00%), Postives = 96/135 (71.11%), Query Frame = 1
Query: 22 SEKIAMTAPVLVEPAARXXXXXXXXXXXXXXQGDSVSGMMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILV 426
+EKI MTAPV VEP + XXXXXXXXX + G +WRV F MPG Y+M T+P+P NPAV LRE+P YAV+ FSGFTGEEKV +KT EL+ W+K K I P+LARYNPPWTLPF+RRNEI+V
Sbjct: 80 NEKIEMTAPVGVEPRSXXXXXXXXXXM------ERTGG-----QWRVWFVMPGRYTMDTIPRPNNPAVKLREIPATTYAVIRFSGFTGEEKVAKKTAELVAWMKEKGLAPIGKPELARYNPPWTLPFLRRNEIMV 203
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Match: A0A3B9L5L9_9PROT (Heme-binding protein n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A3B9L5L9_9PROT) HSP 1 Score: 139 bits (349), Expect = 9.730e-39 Identity = 80/140 (57.14%), Postives = 97/140 (69.29%), Query Frame = 1
Query: 7 SGAKPSEKIAMTAPVLVEPAARXXXXXXXXXXXXXXQGDSVSGMMHSKRWRVQFTMPGEYSMATLPKPRNPAVTLREVPGKRYAVLVFSGFTGEEKVQQKTDELLVWLKAKNRRAIATPQLARYNPPWTLPFMRRNEILV 426
SG K EKI+MTAPV + P A+ XXXXXXXX + +WR+ F MP +Y+++TLP P NPAVTLRE+P R AVL FSGF GEEK +KT ELL WL +KN I P+LARYNPPWTLPF+RRNE++V
Sbjct: 59 SGGK--EKISMTAPVTMAPRAQQDQAESXXXXXXXXXXXXXX-QQSAGQWRMYFVMPSQYTLSTLPTPNNPAVTLRELPASRVAVLRFSGFAGEEKTAKKTAELLAWLNSKNITPIGEPELARYNPPWTLPFLRRNEVMV 195 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18115.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18115.1.1 >prot_P-wetherbeei_contig18115.1.1 ID=prot_P-wetherbeei_contig18115.1.1|Name=mRNA_P-wetherbeei_contig18115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp RGSGAKPSEKIAMTAPVLVEPAARSEKIAMNAPVSVEPQGDSVSGMMHSKback to top mRNA from alignment at P-wetherbeei_contig18115:1..444+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18115.1.1 ID=mRNA_P-wetherbeei_contig18115.1.1|Name=mRNA_P-wetherbeei_contig18115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig18115:1..444+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18115:1..444+ >mRNA_P-wetherbeei_contig18115.1.1 ID=mRNA_P-wetherbeei_contig18115.1.1|Name=mRNA_P-wetherbeei_contig18115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig18115:1..444+ (Phaeothamnion wetherbeei SAG_119_79)back to top |