mRNA_P-wetherbeei_contig18028.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: B8BRN2_THAPS (AB hydrolase-1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRN2_THAPS) HSP 1 Score: 109 bits (272), Expect = 1.320e-25 Identity = 49/74 (66.22%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 91 FMAFGAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
F FGAV V+P+NFYRLL+ VLLFPGG +EALHGKGE Y+VFWP+ + DFVR A NATI+P SAIG AD
Sbjct: 638 FSMFGAVKVTPKNFYRLLQTNQAVLLFPGGVKEALHGKGEDYEVFWPDKKTDFVRVAARFNATIVPISAIGAAD 711
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: A0A7S3Q0K0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0K0_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.320e-25 Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 91 FMAFGAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
F FGAV V+PRN+YRL++ G LLFPGG RE HGK EAY++FWPED+ DFVRTA NATI+P SA+G AD
Sbjct: 541 FEQFGAVMVTPRNYYRLMQTGQTGLLFPGGVREVFHGKDEAYELFWPEDKLDFVRTASRFNATIVPISAVGAAD 614
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: A0A7S2HWL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HWL6_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.480e-25 Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 91 FMAFGAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
F AFGAV +P NFYRL++ VL FPGGAREA HGK EAYQ+FWPE+ DF+R+A NATI+P SAIG AD
Sbjct: 32 FRAFGAVEANPMNFYRLMQTRQTVLHFPGGAREAYHGKNEAYQLFWPENM-DFIRSAAKFNATIVPISAIGAAD 104
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: D7G6D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6D6_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 1.310e-24 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 103 GAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
GAVPV+PRN RL + G+ +LL+PGGA+EALH KG+ YQ+FWPE + +FVR A + NATI+PF+A+G AD
Sbjct: 5 GAVPVTPRNMLRLFKAGESMLLYPGGAKEALHQKGQDYQLFWPE-KGEFVRMAASFNATIVPFAAVGSAD 73
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: D7G4M7_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M7_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.560e-24 Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 91 FMAFGAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
F FGAVPVSPRN YRLL+RGD VLLFPGG EA H KGE Y++FWPE + +FVR AVA +A I+PFSAIG AD
Sbjct: 614 FTKFGAVPVSPRNMYRLLKRGDNVLLFPGGVSEAYHRKGEDYKLFWPE-KAEFVRLAVASDAIIVPFSAIGVAD 686
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: A0A7S2DM45_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2DM45_9DINO) HSP 1 Score: 95.9 bits (237), Expect = 2.020e-23 Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 91 FMAFGAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
F FGAVPV+PRN ++LL++G+ LLFPGG +EALHG GE YQV WPE + DFVR A A ++PF +G D
Sbjct: 15 FETFGAVPVTPRNIFKLLQKGEMTLLFPGGMKEALHGPGEEYQVMWPE-QTDFVRVAARFGAVVVPFGGVGADD 87
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: A0A7S2K9L3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K9L3_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.710e-23 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 91 FMAFGAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
F FGAV V+P+N+YRL++ G LLFPGG RE HGK EAYQ+ WPE + DFVRTA NATIIP SA+G AD
Sbjct: 313 FETFGAVRVTPKNYYRLMQTGQAALLFPGGVREVFHGKNEAYQLMWPE-KTDFVRTAAKFNATIIPLSAVGAAD 385
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: A0A1E7FBB4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBB4_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.640e-23 Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 85 EEFMAFGAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
+ F FGAV V+P+NFYRL++ G LLFPGG RE HGK E+YQ+FWPE + DFVRTA NATI+P SA+G AD
Sbjct: 430 QNFEKFGAVMVTPKNFYRLMQTGQNALLFPGGVREVFHGKNESYQLFWPE-KVDFVRTAARFNATIVPVSAVGMAD 504
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: A0A7S1BH14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BH14_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.730e-23 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 91 FMAFGAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
F FGAV V+PRN+YRL++ G LLFPGG RE HGK EAY++FWPE + DFVR A NATIIP SA+G AD
Sbjct: 468 FQKFGAVEVTPRNYYRLMQTGQAALLFPGGVREVFHGKDEAYKLFWPE-KTDFVRIAAKFNATIIPVSAVGAAD 540
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Match: A0A448YUI4_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUI4_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.800e-23 Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 85 EEFMAFGAVPVSPRNFYRLLRRGDPVLLFPGGAREALHGKGEAYQVFWPEDRRDFVRTAVALNATIIPFSAIGGAD 312
+ F FGAV V+PRNFYRL++ G LLFPGG RE HG+ E+YQ+FWP D+ DFVRTA NATI+P SA+G AD
Sbjct: 540 QNFEEFGAVMVTPRNFYRLMQTGQNALLFPGGVREVFHGRDESYQLFWP-DKVDFVRTAARFNATIVPVSAVGMAD 614 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18028.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18028.1.1 >prot_P-wetherbeei_contig18028.1.1 ID=prot_P-wetherbeei_contig18028.1.1|Name=mRNA_P-wetherbeei_contig18028.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp MTPGGGGGGGFGAGGLGGGGGHGGGGIGEEFMAFGAVPVSPRNFYRLLRRback to top mRNA from alignment at P-wetherbeei_contig18028:426..964- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18028.1.1 ID=mRNA_P-wetherbeei_contig18028.1.1|Name=mRNA_P-wetherbeei_contig18028.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=539bp|location=Sequence derived from alignment at P-wetherbeei_contig18028:426..964- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18028:426..964- >mRNA_P-wetherbeei_contig18028.1.1 ID=mRNA_P-wetherbeei_contig18028.1.1|Name=mRNA_P-wetherbeei_contig18028.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig18028:426..964- (Phaeothamnion wetherbeei SAG_119_79)back to top |