mRNA_P-wetherbeei_contig17907.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17907.1.1
Unique NamemRNA_P-wetherbeei_contig17907.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A836CLV1_9STRA (NADH(P)-binding-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV1_9STRA)

HSP 1 Score: 273 bits (697), Expect = 2.720e-87
Identity = 161/275 (58.55%), Postives = 193/275 (70.18%), Query Frame = 1
Query:   52 FAPSEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLFGEG---VDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQ-TGALRGETWAALLSGLRSD 864
             +P    AAA G + +LGA GKTG ECVK  L +G+A  A  R  S S  S F +    +  A+ DVT   ++ AA+ GA GVIFA+SASK GGNA+AVDY+GVVNAA+AC+EN+VPR V+VSSGGVSKP+S VYKFLNLFGEIM +KALGE  VR L+A  +S  P   YTIVRPGGLTL    G   +E++QGD  SGRIARADVA +C+E+I S A    TFECY ADT KPLDSVG+SN+LKQT+ P  P  + A RG TWA L  GL  D
Sbjct:   29 LSPGTVFAAAGGAVTVLGANGKTGTECVKQLLAKGIACTATSR--SGSLKSEFEDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYA--QSDAP-CYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPD 298          
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: D8LDG8_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG8_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 2.020e-82
Identity = 148/273 (54.21%), Postives = 191/273 (69.96%), Query Frame = 1
Query:   64 EATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLFG----EGVDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQTGA-LRGETWAALLSGLRSDS 867
            +A+AA +  + +LGAGGKTG+ECV+    +G   +AV R++++           +G+ + +ADVT P +L   I GAS VIFASSASK GG+AKAVDYEGVVN A+AC+E  VPR VVVSSGGV+ P+S++YKFLNLFGEIM++K  GE  +R ++AA         YTIVRPGGLTLD   G  A+EL+QGD KSGRIARADVA +C+ESI S+ A   T ECY  DTAKPL +VG+SN+LKQ ++      G    G+TW AL SGL+ D+
Sbjct:  103 DASAATSSDVTVLGAGGKTGRECVEYLASKGTGVRAVARSLTNKEGEPLAFTTTKGITMETADVTVPSSLPGVIKGASAVIFASSASKQGGSAKAVDYEGVVNVAKACLEAKVPRLVVVSSGGVATPESSIYKFLNLFGEIMSWKIQGEDQLRSMYAAQDVCH----YTIVRPGGLTLDPPRGVGAIELNQGDTKSGRIARADVARVCVESIYSRNAEDCTLECYYKDTAKPLAAVGVSNILKQKTDDTAKSFGTESTGDTWDALFSGLKHDA 371          
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S2HEC2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HEC2_9STRA)

HSP 1 Score: 260 bits (664), Expect = 4.270e-81
Identity = 147/266 (55.26%), Postives = 183/266 (68.80%), Query Frame = 1
Query:   88 PIVILGAGGKTGQECVKAALRRGLATKAVVR-----AVSDSTASLFGEGVDI--ASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQTGALRGETWAALLSGLRSD 864
            P++I+GA G+TG ECVK     G+   A  R     A+ + +++L      +  A+ DVT+PETL + I G+  VIFA+SASK GG A AVD  G+VN A+ACIE +VPR V+VSSGGVSKPDS VY FLN+FG IM  K  GE  VR+++ +  S K GLSYT+VRPGGLT D   G AAVEL+QGD KSGRI+RADVA +C+E +SS AAAG TFECY+ADTA PL SVG+SN++K  +          RGETW AL SGL  D
Sbjct:  126 PVIIIGANGRTGTECVKYLASSGMPVVATSRSGTYNALEEVSSTLPPSSTLLREAACDVTKPETLTSTIQGSKAVIFAASASKAGGTAAAVDNTGLVNVAKACIECNVPRLVIVSSGGVSKPDSPVYLFLNIFGNIMEEKIRGEDAVREMYKSLPSGKNGLSYTVVRPGGLTTDPPRGVAAVELNQGDTKSGRISRADVAAICVECLSSDAAAGTTFECYDADTAAPLASVGMSNIMKAKTREAFVSGKERRGETWGALFSGLEKD 391          
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S0HMC0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HMC0_9CRYP)

HSP 1 Score: 251 bits (641), Expect = 7.000e-78
Identity = 143/284 (50.35%), Postives = 194/284 (68.31%), Query Frame = 1
Query:   46 TVFAPSEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLF---GEGVDIAS--ADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLS--YTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQ---TGALR-GETWAALLSGLRSD 864
            T  + S A     G + ++GAGG TG+ECV A +RRG+  +A++RA ++S    F   G+   ++    D+T P+TL+  + G   +IFA+SASK GG+ + VDY+G++N A+ CI+ ++ R VVVSSG VS+PDSAVYKFLNLFG IM +K  GE+ ++ ++ AAK+  P  S  YTIVRPGGLT   + G +++EL+QGD KSGRIARADVAE+C+ESI SK AA  TFECY  DTAKPL+ VGLSNL K+ +   + Q   TG  R G++W  L SGL  D
Sbjct:   89 TSVSESMAAVPTGGSVAVVGAGGGTGKECVDALIRRGIPVRAIIRAKTNSKGKDFVLEGDSSLVSEIVGDITAPDTLRDPLKGCKALIFAASASKKGGDPQKVDYQGLLNCAQLCIDQNIERLVVVSSGAVSRPDSAVYKFLNLFGSIMYWKIQGENEMKSMYKAAKAKNPSFSGSYTIVRPGGLTEGPSLGVSSIELNQGDTKSGRIARADVAEICVESIFSKDAADTTFECYYKDTAKPLEGVGLSNLFKKKTSDTEAQSNLTGKERQGDSWPKLFSGLEKD 372          
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: L1IPP0_GUITC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IPP0_GUITC)

HSP 1 Score: 246 bits (628), Expect = 7.330e-77
Identity = 142/279 (50.90%), Postives = 190/279 (68.10%), Query Frame = 1
Query:   61 SEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLF---GEG--VDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGL--SYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQ---TGALR-GETWAALLSGLRSD 864
            S A A   G I ++GA G TG+ECV A +RRG+  +A++RA ++S    F   G+   V     D+T P+TL+ ++ G   +IFA+SASK GG+ K VDY+G++N A+ CI+ ++ R VVVSSG VS+PDSAVYKFLNLFG IM +K  GE+ ++ ++ +A+   P    SYTIVRPGGLT  +  G ++VEL+QGD KSGRIARADVAE+C+ESI SK AA  TFECY  DTAKPL+ VGLSNL K+ +   + Q   TG  R  ++W  L +GL  D
Sbjct:   23 SLAAAPTGGSIAVVGASGGTGKECVNALVRRGIPVRAIIRAKTNSKGKDFVLEGDSSLVSEVIGDITSPDTLRDSLKGCKALIFAASASKKGGDPKQVDYQGLLNCAQLCIDQNIERLVVVSSGAVSRPDSAVYKFLNLFGSIMYWKIQGENEMKGMYKSAREKNPSFACSYTIVRPGGLTEGAALGVSSVELNQGDTKSGRIARADVAEICVESIFSKDAADTTFECYYKDTAKPLEGVGLSNLFKKKTSDTEAQSIMTGKERQADSWPKLFAGLDKD 301          
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S3UTL3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTL3_HETAK)

HSP 1 Score: 247 bits (630), Expect = 2.420e-76
Identity = 150/289 (51.90%), Postives = 192/289 (66.44%), Query Frame = 1
Query:   46 TVFAPSEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVS---DSTASLFGEG--------VDIASADVTRPETLKAAIA-GASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQ---TSEPEKPQTGA-LRGETWAALLSGLRSD 864
            ++ +P  A A+  GP+V+LGAGGKTG+ECV + LR G+   A  R+ +   D+ A              +  A+A+V +  TL   I  G +GVIFA+SASK GG AK VDYEG+V  A+ACI  +VPR VVVSSGGVSKPDSAVYKFLNLFGEIM YK +GE  V+ L+AAA    P L YT+VRPGGLT +   G AA+EL+QGD KSGRIARADVAE+ + ++   AA    FECY+ADT+KPL++VG SN++K+   T E     TG   R ++W  L  GL+ D
Sbjct:   77 SILSPQSAFASP-GPVVVLGAGGKTGKECVYSLLRNGVPCIATSRSGAPQLDAAAXXXXXXXXXXXXXXLSFAAANVVQETTLTEVITPGIAGVIFAASASKKGGTAKEVDYEGLVKVAKACIAAEVPRLVVVSSGGVSKPDSAVYKFLNLFGEIMKYKVMGEDEVKALYAAA--GNPALGYTVVRPGGLTEEPAKGVAALELNQGDTKSGRIARADVAEIAVRALLDPAAKNTVFECYDADTSKPLNAVGASNIMKKKTSTEEAAATSTGLERRADSWGGLFKGLKPD 362          
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S2PET6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PET6_9DINO)

HSP 1 Score: 236 bits (602), Expect = 1.340e-73
Identity = 143/248 (57.66%), Postives = 174/248 (70.16%), Query Frame = 1
Query:   67 ATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLFGE-------GVDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTS 789
            A AAAAGPIV+LGA GKTG++CV +AL+R        R V+ S   +  E         +    DVTR ETL+A ++GA GVIFA+S SK GG+A+AVD +G+VN ARACI+  V R VVVSSG VS+PDS+VY+FLNLFG IM  K  GE+ VR L+A A  S  G+ YTIVRPGGLT  +  GA AVEL QGD  SGRI+RADVAEL L ++ S ++  ATFECY ADTAKPL +VGLSN+L  TS
Sbjct:    7 AAAAAAGPIVVLGANGKTGRQCVLSALQRD------ERVVATSRTGVLRELDACAPPRCEARVGDVTRLETLRAVVSGARGVIFAASQSKEGGSARAVDNQGLVNTARACIDAGVQRLVVVSSGAVSRPDSSVYQFLNLFGNIMAEKIAGENQVRALYADAARSGGGVGYTIVRPGGLTEAAGRGAGAVELGQGDAVSGRISRADVAELSLAAVDSPSSRNATFECYYADTAKPLQAVGLSNVLGLTS 248          
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: B7G342_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G342_PHATC)

HSP 1 Score: 225 bits (573), Expect = 9.140e-68
Identity = 130/264 (49.24%), Postives = 177/264 (67.05%), Query Frame = 1
Query:   88 PIVILGAGGKTGQECVKAALRRGLATKAVVRAVS---DSTASLFGEGVDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAG-ATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQTGALR-GETWAALLSGLRSD 864
            PI ++GA G+TG +CV+A + RG+  +A  R+ +   DS++ L    V +   DVT+P T+  AI     VIF +SASKNGG    VD +G+VN ARAC+   +P  VVVSSG V+KP+S V++FLNLFG+IM  K  GE  VR L++ +  ++P L YT++RPGGLT D+  G  A+EL+QGD KSGRIARADVA LC+E+       G ATFECY++DT KPL +VG+SN+LKQ + P    +G    GET+  L +GL+ D
Sbjct:  108 PICVIGANGRTGSQCVQACVERGIPVRATSRSGTYNGDSSSKL----VALLPCDVTKPATISRAIERCQAVIFCASASKNGGTPSQVDNDGLVNVARACLAQKIPHLVVVSSGAVTKPNSPVFQFLNLFGKIMEEKIKGEDEVRRLYSMS-GNQPSLVYTVIRPGGLTEDAPRGVTALELNQGDTKSGRIARADVAALCIEATRYPGLTGFATFECYDSDTGKPLSTVGISNILKQKAAPADFTSGTEHVGETFEKLFTGLQRD 366          
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S2B6B5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6B5_9STRA)

HSP 1 Score: 222 bits (565), Expect = 5.290e-67
Identity = 143/297 (48.15%), Postives = 183/297 (61.62%), Query Frame = 1
Query:   40 QGTVFAPSEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVR-------------AVSDSTASLFGEG-----VDIASADVTRPETLKAAIAGAS---GVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGE-IMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQTGALRGETWAALLSGLRSD 864
            +G+   P  A A A  P+++LGA G TG+ CVKA L R +   A  R             A    ++   G+G     +  A+ DVT   +L++AI+  S   GVIFA+SAS  GG+AKAVD +GVV AA AC+  D+ R+VVVSSG V++PDSAVYK L   G+ IM+ K  GE  VR L+A       GL YTIVRPGGLT +   GAA +EL+QGD KSGR++R DVA LC+ES+ S  A  ATFECYNADTAKP++SVGLSN++K  +          RG  W ALL+GL  D
Sbjct:   35 EGSFGLPPVAAATAVAPVLVLGANGGTGKACVKALLARSIPCVAATRTGELSEELKVDLLAAFPPSSKSNGKGGYTGFLQTAAVDVTSSASLRSAISRESCSGGVIFAASASTKGGDAKAVDRDGVVAAAEACLAADIGRYVVVSSGTVTRPDSAVYKLLEFAGKGIMSAKIAGEDKVRSLYADPAVVTKGLGYTIVRPGGLTNEPPMGAAFLELNQGDDKSGRLSREDVASLCVESLRSPDAFDATFECYNADTAKPVESVGLSNIMKSRTATTYVSGKEHRGNEWQALLTGLARD 331          
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S3Q5A4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5A4_9STRA)

HSP 1 Score: 219 bits (558), Expect = 8.890e-66
Identity = 130/263 (49.43%), Postives = 170/263 (64.64%), Query Frame = 1
Query:   88 PIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLFGEGVDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLES-ISSKAAAGATFECYNADTAKPLDSVGLSNLLK--QTSEPEKPQTGA-LRGETWAALLSGLRSD 864
            PI ++GA GKTG ECV A + RG+  +A  R    +      + +  A  DVT   T+ AAI G+  VIFA+SASK GG A AVD  G+ N A +CI   +P  V+VSSG V+KP S VYKFLNLFG IM  K  GE  VR+L+  A S     +YT++RPGGLT +   G +A+EL+QGD KSGRI+RADVA LC+E+ + SK +   TFECY+ADT+KPL +VG+SN++K    S+ E   +G   RGETW  +  GL +D
Sbjct:   85 PICVIGANGKTGSECVDACISRGINVRATSRGGVYTGEYSSEQFLSTAPCDVTISSTVDAAIKGSQAVIFAASASKAGGTAAAVDNIGLTNVASSCIRQGIPHLVIVSSGAVTKPSSPVYKFLNLFGNIMAEKIKGEDTVRELYKDASSP---CTYTVIRPGGLTQELARGVSALELNQGDTKSGRISRADVAALCIEATLHSKDSGSTTFECYDADTSKPLGTVGVSNIVKAKNKSDSEVFMSGKERRGETWGDIFVGLEND 344          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLV1_9STRA2.720e-8758.55NADH(P)-binding-domain-containing protein n=2 Tax=... [more]
D8LDG8_ECTSI2.020e-8254.21NAD(P)-bd_dom domain-containing protein n=1 Tax=Ec... [more]
A0A7S2HEC2_9STRA4.270e-8155.26Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0HMC0_9CRYP7.000e-7850.35Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1IPP0_GUITC7.330e-7750.90NAD(P)-bd_dom domain-containing protein n=2 Tax=Gu... [more]
A0A7S3UTL3_HETAK2.420e-7651.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2PET6_9DINO1.340e-7357.66Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
B7G342_PHATC9.140e-6849.24Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2B6B5_9STRA5.290e-6748.15Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3Q5A4_9STRA8.890e-6649.43Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17907contigP-wetherbeei_contig17907:2..1376 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LDG8
PFAMsNAD_binding_10
Model size958
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.21e-33
EggNOG OGsCOG0702@1|root,KOG1203@2759|Eukaryota
Descriptiondivinyl chlorophyllide a 8-vinyl-reductase activity
Cds size396
COG categoryGM
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186130.653647-UTR-P-wetherbeei_contig17907:1..891683186130.653647-UTR-P-wetherbeei_contig17907:1..89Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17907 2..89 -
1683186130.6783667-UTR-P-wetherbeei_contig17907:759..7831683186130.6783667-UTR-P-wetherbeei_contig17907:759..783Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17907 760..783 -
1683186130.6860948-UTR-P-wetherbeei_contig17907:926..13761683186130.6860948-UTR-P-wetherbeei_contig17907:926..1376Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17907 927..1376 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186130.662762-CDS-P-wetherbeei_contig17907:89..4821683186130.662762-CDS-P-wetherbeei_contig17907:89..482Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17907 90..482 -
1683186130.6705506-CDS-P-wetherbeei_contig17907:756..7591683186130.6705506-CDS-P-wetherbeei_contig17907:756..759Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17907 757..759 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17907.1.1prot_P-wetherbeei_contig17907.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17907 90..759 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17907.1.1

>prot_P-wetherbeei_contig17907.1.1 ID=prot_P-wetherbeei_contig17907.1.1|Name=mRNA_P-wetherbeei_contig17907.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp
MTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQ
GDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNL
LKQTSEPEKPQTGALRGETWAALLSGLRSDS*
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mRNA from alignment at P-wetherbeei_contig17907:2..1376-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17907.1.1 ID=mRNA_P-wetherbeei_contig17907.1.1|Name=mRNA_P-wetherbeei_contig17907.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1375bp|location=Sequence derived from alignment at P-wetherbeei_contig17907:2..1376- (Phaeothamnion wetherbeei SAG_119_79)
AAGATTGGGACAGCAGTGGCCGCCGGGGCAGCGATAGTGCAGGGAACCGT TTTCGCTCCATCAGAGGCAACGGCAGCCGCTGCCGGACCCATCGTCATCC TCGGCGCTGGAGGGAAAACCGGCCAGGAATGCGTCAAGGCGGCGTTGCGT CGTGGGCTTGCAACCAAGGCTGTGGTTCGAGCCGTGTCAGACTCCACCGC TTCTCTCTTTGGCGAGGGCGTTGACATTGCCTCGGCCGATGTGACTCGCC CCGAGACGCTCAAGGCAGCAATTGCTGGCGCCAGTGGTGTCATCTTCGCA TCGAGCGCCAGCAAGAACGGCGGAAACGCAAAGGCGGTCGATTACGAAGG CGTCGTTAACGCGGCCCGCGCTTGCATCGAGAATGACGTGCCTCGATTCG TGGTTGTCTCATCTGGCGGCGTGTCGAAGCCTGACAGTGCTGTTTACAAG GTGAAGAAAGGTTTGATAACGCTGCCGATCTTGCTTATGCAACCTCAACG AGTTAGGCCGCACTCCTTTTAAGCACAAGCAACTCCGACCGACTCTCGCC TTTTTCTCCTCTTCCTGATCTCCTCCCTCTATCTCGAATACAGTTCTTGA ACCTCTTCGGCGAGATTATGGTAAGCTTCACAAAAGATACTCAGTTTCTT GCGTCCTTGGATTTCCGGATACGTCTTCTCTTACTGAGGTCCATGAAGCG ACTGAAGAGTAATATTTTAGGCGAACATGGAATGCCATTGGTGGAAAGCT GTGCAATCTGACTAGCCATATTATGAAGACGCCTGCGTTTGTCCTTTTTC ACATCTCCTCAACATACCCTATCTGCCGCATTGCTCTTCTATCTCCTCCC TCACCGGCCGTGCCATGAACCGACCCGGTCCGCCCCAAAAACAGACCTAC AAGGCTCTCGGCGAATCAGGCGTCCGGGACCTTTTTGCGGCCGCCAAGTC CAGCAAGCCGGGCCTATCGTATACCATCGTCAGGCCCGGCGGCCTGACGC TTGACTCGACTGCTGGCGCCGCTGCTGTTGAGCTTTCGCAGGGCGACGTG AAGAGCGGCCGCATCGCCCGCGCCGACGTCGCCGAGCTCTGCTTGGAGAG CATTTCGAGCAAGGCGGCGGCCGGCGCCACTTTCGAGTGCTACAACGCGG ATACAGCCAAGCCGCTGGATTCCGTGGGGCTGAGCAATTTGCTCAAGCAG ACGTCGGAGCCGGAGAAGCCTCAGACGGGGGCACTGCGCGGGGAGACGTG GGCGGCGCTGCTGTCGGGCCTGCGCTCCGACTCGTGAGGGGGCTTAAGAC TTTAGCGGTTTTAATGAGCACTGGCGTCTATGGGGGAAGACTCGTAATAT TGTAGAGGCCAGGACAAATAGAAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17907:2..1376-

>mRNA_P-wetherbeei_contig17907.1.1 ID=mRNA_P-wetherbeei_contig17907.1.1|Name=mRNA_P-wetherbeei_contig17907.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig17907:2..1376- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCTACAAGGCTCTCGGCGAATCAGGCGTCCGGGACCTTTTTGCGGC
CGCCAAGTCCAGCAAGCCGGGCCTATCGTATACCATCGTCAGGCCCGGCG
GCCTGACGCTTGACTCGACTGCTGGCGCCGCTGCTGTTGAGCTTTCGCAG
GGCGACGTGAAGAGCGGCCGCATCGCCCGCGCCGACGTCGCCGAGCTCTG
CTTGGAGAGCATTTCGAGCAAGGCGGCGGCCGGCGCCACTTTCGAGTGCT
ACAACGCGGATACAGCCAAGCCGCTGGATTCCGTGGGGCTGAGCAATTTG
CTCAAGCAGACGTCGGAGCCGGAGAAGCCTCAGACGGGGGCACTGCGCGG
GGAGACGTGGGCGGCGCTGCTGTCGGGCCTGCGCTCCGACTCGTGA
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