mRNA_P-wetherbeei_contig17907.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A836CLV1_9STRA (NADH(P)-binding-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV1_9STRA) HSP 1 Score: 273 bits (697), Expect = 2.720e-87 Identity = 161/275 (58.55%), Postives = 193/275 (70.18%), Query Frame = 1
Query: 52 FAPSEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLFGEG---VDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQ-TGALRGETWAALLSGLRSD 864
+P AAA G + +LGA GKTG ECVK L +G+A A R S S S F + + A+ DVT ++ AA+ GA GVIFA+SASK GGNA+AVDY+GVVNAA+AC+EN+VPR V+VSSGGVSKP+S VYKFLNLFGEIM +KALGE VR L+A +S P YTIVRPGGLTL G +E++QGD SGRIARADVA +C+E+I S A TFECY ADT KPLDSVG+SN+LKQT+ P P + A RG TWA L GL D
Sbjct: 29 LSPGTVFAAAGGAVTVLGANGKTGTECVKQLLAKGIACTATSR--SGSLKSEFEDPSALLTAAAVDVTNLSSVSAAVKGAKGVIFAASASKGGGNAEAVDYKGVVNAAKACLENNVPRLVIVSSGGVSKPNSPVYKFLNLFGEIMKFKALGEEEVRALYA--QSDAP-CYYTIVRPGGLTLAPPLGVEQLEINQGDAISGRIARADVAAICVEAIYSDATRDTTFECYGADTGKPLDSVGVSNILKQTAGPGTPAPSSAHRGSTWAQLFQGLEPD 298
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: D8LDG8_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG8_ECTSI) HSP 1 Score: 263 bits (671), Expect = 2.020e-82 Identity = 148/273 (54.21%), Postives = 191/273 (69.96%), Query Frame = 1
Query: 64 EATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLFG----EGVDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQTGA-LRGETWAALLSGLRSDS 867
+A+AA + + +LGAGGKTG+ECV+ +G +AV R++++ +G+ + +ADVT P +L I GAS VIFASSASK GG+AKAVDYEGVVN A+AC+E VPR VVVSSGGV+ P+S++YKFLNLFGEIM++K GE +R ++AA YTIVRPGGLTLD G A+EL+QGD KSGRIARADVA +C+ESI S+ A T ECY DTAKPL +VG+SN+LKQ ++ G G+TW AL SGL+ D+
Sbjct: 103 DASAATSSDVTVLGAGGKTGRECVEYLASKGTGVRAVARSLTNKEGEPLAFTTTKGITMETADVTVPSSLPGVIKGASAVIFASSASKQGGSAKAVDYEGVVNVAKACLEAKVPRLVVVSSGGVATPESSIYKFLNLFGEIMSWKIQGEDQLRSMYAAQDVCH----YTIVRPGGLTLDPPRGVGAIELNQGDTKSGRIARADVARVCVESIYSRNAEDCTLECYYKDTAKPLAAVGVSNILKQKTDDTAKSFGTESTGDTWDALFSGLKHDA 371
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S2HEC2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HEC2_9STRA) HSP 1 Score: 260 bits (664), Expect = 4.270e-81 Identity = 147/266 (55.26%), Postives = 183/266 (68.80%), Query Frame = 1
Query: 88 PIVILGAGGKTGQECVKAALRRGLATKAVVR-----AVSDSTASLFGEGVDI--ASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQTGALRGETWAALLSGLRSD 864
P++I+GA G+TG ECVK G+ A R A+ + +++L + A+ DVT+PETL + I G+ VIFA+SASK GG A AVD G+VN A+ACIE +VPR V+VSSGGVSKPDS VY FLN+FG IM K GE VR+++ + S K GLSYT+VRPGGLT D G AAVEL+QGD KSGRI+RADVA +C+E +SS AAAG TFECY+ADTA PL SVG+SN++K + RGETW AL SGL D
Sbjct: 126 PVIIIGANGRTGTECVKYLASSGMPVVATSRSGTYNALEEVSSTLPPSSTLLREAACDVTKPETLTSTIQGSKAVIFAASASKAGGTAAAVDNTGLVNVAKACIECNVPRLVIVSSGGVSKPDSPVYLFLNIFGNIMEEKIRGEDAVREMYKSLPSGKNGLSYTVVRPGGLTTDPPRGVAAVELNQGDTKSGRISRADVAAICVECLSSDAAAGTTFECYDADTAAPLASVGMSNIMKAKTREAFVSGKERRGETWGALFSGLEKD 391
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S0HMC0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HMC0_9CRYP) HSP 1 Score: 251 bits (641), Expect = 7.000e-78 Identity = 143/284 (50.35%), Postives = 194/284 (68.31%), Query Frame = 1
Query: 46 TVFAPSEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLF---GEGVDIAS--ADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLS--YTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQ---TGALR-GETWAALLSGLRSD 864
T + S A G + ++GAGG TG+ECV A +RRG+ +A++RA ++S F G+ ++ D+T P+TL+ + G +IFA+SASK GG+ + VDY+G++N A+ CI+ ++ R VVVSSG VS+PDSAVYKFLNLFG IM +K GE+ ++ ++ AAK+ P S YTIVRPGGLT + G +++EL+QGD KSGRIARADVAE+C+ESI SK AA TFECY DTAKPL+ VGLSNL K+ + + Q TG R G++W L SGL D
Sbjct: 89 TSVSESMAAVPTGGSVAVVGAGGGTGKECVDALIRRGIPVRAIIRAKTNSKGKDFVLEGDSSLVSEIVGDITAPDTLRDPLKGCKALIFAASASKKGGDPQKVDYQGLLNCAQLCIDQNIERLVVVSSGAVSRPDSAVYKFLNLFGSIMYWKIQGENEMKSMYKAAKAKNPSFSGSYTIVRPGGLTEGPSLGVSSIELNQGDTKSGRIARADVAEICVESIFSKDAADTTFECYYKDTAKPLEGVGLSNLFKKKTSDTEAQSNLTGKERQGDSWPKLFSGLEKD 372
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: L1IPP0_GUITC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IPP0_GUITC) HSP 1 Score: 246 bits (628), Expect = 7.330e-77 Identity = 142/279 (50.90%), Postives = 190/279 (68.10%), Query Frame = 1
Query: 61 SEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLF---GEG--VDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGL--SYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQ---TGALR-GETWAALLSGLRSD 864
S A A G I ++GA G TG+ECV A +RRG+ +A++RA ++S F G+ V D+T P+TL+ ++ G +IFA+SASK GG+ K VDY+G++N A+ CI+ ++ R VVVSSG VS+PDSAVYKFLNLFG IM +K GE+ ++ ++ +A+ P SYTIVRPGGLT + G ++VEL+QGD KSGRIARADVAE+C+ESI SK AA TFECY DTAKPL+ VGLSNL K+ + + Q TG R ++W L +GL D
Sbjct: 23 SLAAAPTGGSIAVVGASGGTGKECVNALVRRGIPVRAIIRAKTNSKGKDFVLEGDSSLVSEVIGDITSPDTLRDSLKGCKALIFAASASKKGGDPKQVDYQGLLNCAQLCIDQNIERLVVVSSGAVSRPDSAVYKFLNLFGSIMYWKIQGENEMKGMYKSAREKNPSFACSYTIVRPGGLTEGAALGVSSVELNQGDTKSGRIARADVAEICVESIFSKDAADTTFECYYKDTAKPLEGVGLSNLFKKKTSDTEAQSIMTGKERQADSWPKLFAGLDKD 301
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S3UTL3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTL3_HETAK) HSP 1 Score: 247 bits (630), Expect = 2.420e-76 Identity = 150/289 (51.90%), Postives = 192/289 (66.44%), Query Frame = 1
Query: 46 TVFAPSEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVS---DSTASLFGEG--------VDIASADVTRPETLKAAIA-GASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQ---TSEPEKPQTGA-LRGETWAALLSGLRSD 864
++ +P A A+ GP+V+LGAGGKTG+ECV + LR G+ A R+ + D+ A + A+A+V + TL I G +GVIFA+SASK GG AK VDYEG+V A+ACI +VPR VVVSSGGVSKPDSAVYKFLNLFGEIM YK +GE V+ L+AAA P L YT+VRPGGLT + G AA+EL+QGD KSGRIARADVAE+ + ++ AA FECY+ADT+KPL++VG SN++K+ T E TG R ++W L GL+ D
Sbjct: 77 SILSPQSAFASP-GPVVVLGAGGKTGKECVYSLLRNGVPCIATSRSGAPQLDAAAXXXXXXXXXXXXXXLSFAAANVVQETTLTEVITPGIAGVIFAASASKKGGTAKEVDYEGLVKVAKACIAAEVPRLVVVSSGGVSKPDSAVYKFLNLFGEIMKYKVMGEDEVKALYAAA--GNPALGYTVVRPGGLTEEPAKGVAALELNQGDTKSGRIARADVAEIAVRALLDPAAKNTVFECYDADTSKPLNAVGASNIMKKKTSTEEAAATSTGLERRADSWGGLFKGLKPD 362
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S2PET6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PET6_9DINO) HSP 1 Score: 236 bits (602), Expect = 1.340e-73 Identity = 143/248 (57.66%), Postives = 174/248 (70.16%), Query Frame = 1
Query: 67 ATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLFGE-------GVDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTS 789
A AAAAGPIV+LGA GKTG++CV +AL+R R V+ S + E + DVTR ETL+A ++GA GVIFA+S SK GG+A+AVD +G+VN ARACI+ V R VVVSSG VS+PDS+VY+FLNLFG IM K GE+ VR L+A A S G+ YTIVRPGGLT + GA AVEL QGD SGRI+RADVAEL L ++ S ++ ATFECY ADTAKPL +VGLSN+L TS
Sbjct: 7 AAAAAAGPIVVLGANGKTGRQCVLSALQRD------ERVVATSRTGVLRELDACAPPRCEARVGDVTRLETLRAVVSGARGVIFAASQSKEGGSARAVDNQGLVNTARACIDAGVQRLVVVSSGAVSRPDSSVYQFLNLFGNIMAEKIAGENQVRALYADAARSGGGVGYTIVRPGGLTEAAGRGAGAVELGQGDAVSGRISRADVAELSLAAVDSPSSRNATFECYYADTAKPLQAVGLSNVLGLTS 248
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: B7G342_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G342_PHATC) HSP 1 Score: 225 bits (573), Expect = 9.140e-68 Identity = 130/264 (49.24%), Postives = 177/264 (67.05%), Query Frame = 1
Query: 88 PIVILGAGGKTGQECVKAALRRGLATKAVVRAVS---DSTASLFGEGVDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAG-ATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQTGALR-GETWAALLSGLRSD 864
PI ++GA G+TG +CV+A + RG+ +A R+ + DS++ L V + DVT+P T+ AI VIF +SASKNGG VD +G+VN ARAC+ +P VVVSSG V+KP+S V++FLNLFG+IM K GE VR L++ + ++P L YT++RPGGLT D+ G A+EL+QGD KSGRIARADVA LC+E+ G ATFECY++DT KPL +VG+SN+LKQ + P +G GET+ L +GL+ D
Sbjct: 108 PICVIGANGRTGSQCVQACVERGIPVRATSRSGTYNGDSSSKL----VALLPCDVTKPATISRAIERCQAVIFCASASKNGGTPSQVDNDGLVNVARACLAQKIPHLVVVSSGAVTKPNSPVFQFLNLFGKIMEEKIKGEDEVRRLYSMS-GNQPSLVYTVIRPGGLTEDAPRGVTALELNQGDTKSGRIARADVAALCIEATRYPGLTGFATFECYDSDTGKPLSTVGISNILKQKAAPADFTSGTEHVGETFEKLFTGLQRD 366
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S2B6B5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6B5_9STRA) HSP 1 Score: 222 bits (565), Expect = 5.290e-67 Identity = 143/297 (48.15%), Postives = 183/297 (61.62%), Query Frame = 1
Query: 40 QGTVFAPSEATAAAAGPIVILGAGGKTGQECVKAALRRGLATKAVVR-------------AVSDSTASLFGEG-----VDIASADVTRPETLKAAIAGAS---GVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGE-IMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLESISSKAAAGATFECYNADTAKPLDSVGLSNLLKQTSEPEKPQTGALRGETWAALLSGLRSD 864
+G+ P A A A P+++LGA G TG+ CVKA L R + A R A ++ G+G + A+ DVT +L++AI+ S GVIFA+SAS GG+AKAVD +GVV AA AC+ D+ R+VVVSSG V++PDSAVYK L G+ IM+ K GE VR L+A GL YTIVRPGGLT + GAA +EL+QGD KSGR++R DVA LC+ES+ S A ATFECYNADTAKP++SVGLSN++K + RG W ALL+GL D
Sbjct: 35 EGSFGLPPVAAATAVAPVLVLGANGGTGKACVKALLARSIPCVAATRTGELSEELKVDLLAAFPPSSKSNGKGGYTGFLQTAAVDVTSSASLRSAISRESCSGGVIFAASASTKGGDAKAVDRDGVVAAAEACLAADIGRYVVVSSGTVTRPDSAVYKLLEFAGKGIMSAKIAGEDKVRSLYADPAVVTKGLGYTIVRPGGLTNEPPMGAAFLELNQGDDKSGRLSREDVASLCVESLRSPDAFDATFECYNADTAKPVESVGLSNIMKSRTATTYVSGKEHRGNEWQALLTGLARD 331
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Match: A0A7S3Q5A4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5A4_9STRA) HSP 1 Score: 219 bits (558), Expect = 8.890e-66 Identity = 130/263 (49.43%), Postives = 170/263 (64.64%), Query Frame = 1
Query: 88 PIVILGAGGKTGQECVKAALRRGLATKAVVRAVSDSTASLFGEGVDIASADVTRPETLKAAIAGASGVIFASSASKNGGNAKAVDYEGVVNAARACIENDVPRFVVVSSGGVSKPDSAVYKFLNLFGEIMTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQGDVKSGRIARADVAELCLES-ISSKAAAGATFECYNADTAKPLDSVGLSNLLK--QTSEPEKPQTGA-LRGETWAALLSGLRSD 864
PI ++GA GKTG ECV A + RG+ +A R + + + A DVT T+ AAI G+ VIFA+SASK GG A AVD G+ N A +CI +P V+VSSG V+KP S VYKFLNLFG IM K GE VR+L+ A S +YT++RPGGLT + G +A+EL+QGD KSGRI+RADVA LC+E+ + SK + TFECY+ADT+KPL +VG+SN++K S+ E +G RGETW + GL +D
Sbjct: 85 PICVIGANGKTGSECVDACISRGINVRATSRGGVYTGEYSSEQFLSTAPCDVTISSTVDAAIKGSQAVIFAASASKAGGTAAAVDNIGLTNVASSCIRQGIPHLVIVSSGAVTKPSSPVYKFLNLFGNIMAEKIKGEDTVRELYKDASSP---CTYTVIRPGGLTQELARGVSALELNQGDTKSGRISRADVAALCIEATLHSKDSGSTTFECYDADTSKPLGTVGVSNIVKAKNKSDSEVFMSGKERRGETWGDIFVGLEND 344 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17907.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17907.1.1 >prot_P-wetherbeei_contig17907.1.1 ID=prot_P-wetherbeei_contig17907.1.1|Name=mRNA_P-wetherbeei_contig17907.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp MTYKALGESGVRDLFAAAKSSKPGLSYTIVRPGGLTLDSTAGAAAVELSQback to top mRNA from alignment at P-wetherbeei_contig17907:2..1376- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17907.1.1 ID=mRNA_P-wetherbeei_contig17907.1.1|Name=mRNA_P-wetherbeei_contig17907.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1375bp|location=Sequence derived from alignment at P-wetherbeei_contig17907:2..1376- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17907:2..1376- >mRNA_P-wetherbeei_contig17907.1.1 ID=mRNA_P-wetherbeei_contig17907.1.1|Name=mRNA_P-wetherbeei_contig17907.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig17907:2..1376- (Phaeothamnion wetherbeei SAG_119_79)back to top |