mRNA_P-wetherbeei_contig1783.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1783.1.1 vs. uniprot
Match: D7FW95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW95_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.650e-26 Identity = 130/391 (33.25%), Postives = 169/391 (43.22%), Query Frame = 1
Query: 1 IFRGSDVATELTSLASAVTGAASRALAEAAAAGDRXXXXXXXXXXXAIDKPLGRGGYTPLMRAASFGHRKVAKLLISEGADLFVRDRHGRTALDWARACGRDGATRLLERTMENDVRAHRTEFLLRRRRDSEA-AVASVVDRLRRDLRAALEAQDLAAVLAVIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGDSCSVAPCSGGGILTSDNAAGAPGNLFINASPAVPAA---PXXXXXXXXXXXAASTDPPAACP-------FVDVETDSGVTALILAVFRDDGDAAARLLAAGADAAVVTRRGHTALTWAAVCGH-AVAAQALVGTPL-----------------GEAADPGQAVGR----ERRTALHYAAASGSAGVALALLD 1074
+F G D+A ++ L V A + L AAAAG +D L +TPLMRAA++GH LI+EGAD+F DR GRTALDW+R RD A R+LER MEN++R +R E R D E AV R R++ A+ A+DL V ++D + G S AP S T + A ++ P P A P T+P F+D E G TAL LA +D + RL+ GAD V GHTAL+WAAVCG VAA+ L+G G D AV R E +TALH AA +G++GV + LLD
Sbjct: 23 LFSGPDIAGQVEELEKRVAQQACKDLTLAAAAGKTSDVVRSIELGGDVDTTLNT--FTPLMRAATWGHVDTLATLIAEGADMFATDRQGRTALDWSRIARRDKAARILERAMENEIR-YRREATKAVRGDKELWAVIEANARHAREVAHAVNARDLKEVKRIVDRAQLTRDKFVSVCDRLGFRRREEANERARESSCGGS-GEAPAS-----TVEQA--------LSVCPTPPTAAEKPSVAALATPWTAEDGTEPNDGSLLRRIPVFFLDAEGRGGTTALALATIENDAETVRRLMKEGADPGVEASSGHTALSWAAVCGFDLVAAELLLGNNTNKRXXXXXXXXXXSSRSGPMQDAINAVTRSTLVEGKTALHNAAFNGNSGVVVLLLD 396
BLAST of mRNA_P-wetherbeei_contig1783.1.1 vs. uniprot
Match: A0A6H5L2H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H6_9PHAE) HSP 1 Score: 117 bits (293), Expect = 4.650e-25 Identity = 114/327 (34.86%), Postives = 149/327 (45.57%), Query Frame = 1
Query: 169 YTPLMRAASFGHRKVAKLLISEGADLFVRDRHGRTALDWARACGRDGATRLLERTMENDVRAHRTEFLLRRRRDSEA-AVASVVDRLRRDLRAALEAQDLAAVLAVIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGDSCSVAPCSGGGILTSDNAAGAPGNLFINASPAVPAAPXXXXXXXXXXXAASTDPPAACP--FVDVETDSGVTALILAVFRDDGDAAARLLAAGADAAVVTRRGHTALTWAAVCGH-AVAAQALVGTPL-----------------GEAADPGQAVGR----ERRTALHYAAASGSAGVALALLD 1074
+TPLMRAA++GH LI+EGAD+F DR GRTALDW+R RD A R+LER MEN++R +R E R D E AV R R++ A+ +DL V ++D + GDS AP S + + + P + S A A P + P F+D E G TAL LA DD + RL+ GAD V GHTAL+WAAVCG VAA+ L+G+ G D +AV R E +TALH AA +G++GV + LLD
Sbjct: 46 FTPLMRAATWGHVDTLATLIAEGADMFTTDRQGRTALDWSRIARRDKAARILERAMENEIR-YRREATKAVRCDKELWAVIEANARHAREVAHAVNTRDLKEVKRIVDRAQLTRDKFVSVCDRLGFRRREEANERARESSCGDSVE-APAS---TVEALSVRPTPPTAAEDPSVAALATPWTAEDGTKTNDGSLL---RGIPVFFLDAEGRGGTTALALATIEDDAETVRRLMKEGADPGVEASSGHTALSWAAVCGFDLVAAELLLGSNTNKRSLSSSSSISGSSRSGPMQDAIKAVTRSTVVEGKTALHNAAFNGNSGVVVLLLD 364
BLAST of mRNA_P-wetherbeei_contig1783.1.1 vs. uniprot
Match: A0A3R6XU77_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XU77_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 3.290e-6 Identity = 84/310 (27.10%), Postives = 126/310 (40.65%), Query Frame = 1
Query: 166 GYTPLMRAASFG-----HRKVAKLLISEGADLFVRDRHGRTALDWARACGRDGATRLLERTMENDVRAHRTEFLLRRRRDSEAAVASVVDRLRRDLRAALEAQDLAAVLAVIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGDSCSVAPCSGGGILTSDNAAGAPGNLFINASPAVPAAPXXXXXXXXXXXAASTDPPAACPFVDVETDSGVTALILAVFRDDGDAAARLLAAGADAAVVTRRGHTALTWAAVCGHAVAAQALVGTPLGEAADPGQAVGRERRTALHYAAASGS---AGVALALL 1071
GYTPLM+AA+ + + L+ AD+F RDR G+TAL+WAR GA+R LE ++ + A R R A V +L +D++ A+ A ++ + A+I A D +T+D +F A+ + + F+DVET +G +AL A D L+ GAD + T+ HTALTWAA CGH Q L+ + AD Q E +TAL +A+ +G G+ +A+L
Sbjct: 432 GYTPLMKAAAMTVLDGTNEGLVLALLRHDADVFARDRKGKTALEWARLTNNTGASRHLEMAIQAHIYASRIADADENRVTKHAHVLERHAQLCKDMQTAVAANNVVQIRALIQQ------------------------------ATDDG-----------MTAD--------VFREAATS-----------------------HSRYFLDVETSAGWSALTKAASVGDLPTIELLVQHGADVNLETKLRHTALTWAAYCGHKDVVQFLLQN---QRADWRQGTS-EGKTALIHASRNGQHVVVGILVAIL 665
BLAST of mRNA_P-wetherbeei_contig1783.1.1 vs. uniprot
Match: A0A8J2SAI7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAI7_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.390e-5 Identity = 76/305 (24.92%), Postives = 112/305 (36.72%), Query Frame = 1
Query: 169 YTPLMRAASFGHRKVAKLLISEGADL---FVRDRHGRTALDWARACGRDGATRLLERTMENDVRAHRTEFLLRRRRDSEAAVASVVDRLRRDLRAALEAQDLAAVLAVIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGDSCSVAPCSGGGILTSDNAAGAPGNLFINASPAVPAAPXXXXXXXXXXXAASTDPPAACPFVDVETDSGVTALILAVFRDDGDAAARLLAAGADAAVVTRRGHTALTWAAVCGHAVAAQALVGTPLGEAADPGQAVGRERRTALHYAAASGSAGVALALLD 1074
+T LM+AA+ G + + L+++ L F DR GR AL+WAR DG L++ M +VR + + R + R+R + A+ +D+ + +D + +DN+ DP +VDVET +G TAL +A + + A +LL GA +RGHTAL+WA VCG A +V L ADP + E R L +AA G A LLD
Sbjct: 78 FTDLMKAAAVGRQSEVEYLLTQPETLLTLFATDRSGRNALEWARQKKFDGCASLIQEAMSREVRVRAEDREAQERIFDLKRIVRTNGRIRAVVEHAINERDIVTISNCVDGADFDRQEYVRACNLLQGYMNRHSDET--------------------MITDNSQ------------------------------EEFDPDPEAYYVDVETLAG-TALFVACAENQVELADKLLTLGAVVDFENQRGHTALSWACVCG----ADKVVELLLTHGADPKRKSKLEERVPLAHAAQHGHARCCQILLD 327 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1783.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1783.1.1 >prot_P-wetherbeei_contig1783.1.1 ID=prot_P-wetherbeei_contig1783.1.1|Name=mRNA_P-wetherbeei_contig1783.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=358bp IFRGSDVATELTSLASAVTGAASRALAEAAAAGDRLAAGAALDDGAAIDKback to top mRNA from alignment at P-wetherbeei_contig1783:138..1211- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1783.1.1 ID=mRNA_P-wetherbeei_contig1783.1.1|Name=mRNA_P-wetherbeei_contig1783.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig1783:138..1211- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1783:138..1211- >mRNA_P-wetherbeei_contig1783.1.1 ID=mRNA_P-wetherbeei_contig1783.1.1|Name=mRNA_P-wetherbeei_contig1783.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig1783:138..1211- (Phaeothamnion wetherbeei SAG_119_79)back to top |