mRNA_P-wetherbeei_contig17800.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17800.1.1
Unique NamemRNA_P-wetherbeei_contig17800.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: UPI001987A92C (Uracil-DNA glycosylase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI001987A92C)

HSP 1 Score: 249 bits (637), Expect = 2.160e-77
Identity = 142/273 (52.01%), Postives = 178/273 (65.20%), Query Frame = 1
Query:   22 MSPGGAQAALAWLIEMGADEIVGEASVNRFAAVVAPPVVAA--PVSKVAPVAAP--------------SSADA-------CNSLAELQAALLALEEFPLKKTASNLCFADCNPQAEVMIIGDVPGRDEDIEGKVFAGQNLALLEKMLGAIGLSVAST----SSF--NFVPWRPPGNRTLTDAEIQMCQPFILRAVELCRPKFILCLGGHPAQRLSGKSDGLLSLRGKWFDLAIGGKKIPVLASFHPSYLLKQPGQKRLAWRDLLSFKEALDAH 753
            M+P  A  ALAWL EMGADEIVGE +++RF A   P   +   P S V P   P               S  A         +L ++ AAL  L+  PLKKTA+NLCFAD NP+A VM+IG+ PGRDEDI+GK F G++  LL++ML AIGLS  +     S F  N V WRPPGNRT T+AE  MC PF+LR +EL +P+ I+CLG  PA RL+G+ DG+L +RGKW    IGG+ IP+L + HP+YLL+QPGQKRLAWRDLL  ++ALDAH
Sbjct:    1 MTPRQAAQALAWLSEMGADEIVGETAIDRFGAQTIPSSSSRRKPGSTVEPEQLPIIPSRGEMGPGLRLPSGQARRWDDGSLGALDDIVAALSVLDSCPLKKTATNLCFADGNPRAHVMLIGEAPGRDEDIQGKPFVGRSGQLLDRMLAAIGLSREAVEPEHSVFISNTVFWRPPGNRTPTEAETAMCLPFLLRTIELLQPRIIVCLGATPAHRLTGRCDGILKMRGKWLKCTIGGRDIPLLPTLHPAYLLRQPGQKRLAWRDLLLLRQALDAH 273          
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: A0A2W2AJI3_9HYPH (Type-4 uracil-DNA glycosylase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2AJI3_9HYPH)

HSP 1 Score: 243 bits (621), Expect = 3.980e-75
Identity = 131/263 (49.81%), Postives = 167/263 (63.50%), Query Frame = 1
Query:    1 MQTKQNDMSPGGAQAALAWLIEMGADEIVGEASVNRFAAVVAPPVVAAPVSKVAPVAAPSS------ADACNSLAELQAALLALEEFPLKKTASNLCFADCNPQAEVMIIGDVPGRDEDIEGKVFAGQNLALLEKMLGAIGLS------VASTSSFNFVPWRPPGNRTLTDAEIQMCQPFILRAVELCRPKFILCLGGHPAQRLSGKSDGLLSLRGKWFDLAIGGKKIPVLASFHPSYLLKQPGQKRLAWRDLLSFKEALDAH 753
            M    NDM+P  A  AL WL EMGADEI+GE+ VNR AA    P                       A    +L E++ AL   +  PLKKTA+ LCFAD NP A VM++G+ PGR+EDIEG+ F G++  LL++ML AIGLS       ++    N + WRPPGNRT T+AE QMC PF+ R +EL +P  I+CLG  PA RL+G+SDG+L LRGKW    + G+ IP+L + HP+YLL+QP QKRLAWRDLLS ++ LDAH
Sbjct:    1 MDQTPNDMTPHDAAEALRWLSEMGADEIIGESPVNRLAAPAPRPAXXXXXXXXXXXXXXXXXXXXXXAAQYRTLEEIRQALEGFDACPLKKTATKLCFADGNPSARVMLVGEAPGREEDIEGRPFVGRSGQLLDRMLAAIGLSRMAQDRESAVFITNVIFWRPPGNRTPTEAETQMCLPFLTRTIELQKPDVIVCLGATPAHRLTGRSDGILKLRGKWVTANVSGRNIPLLPTLHPAYLLRQPAQKRLAWRDLLSLRQMLDAH 263          
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: A0A6G6WVD1_9HYPH (Type-4 uracil-DNA glycosylase n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WVD1_9HYPH)

HSP 1 Score: 241 bits (615), Expect = 4.500e-74
Identity = 142/275 (51.64%), Postives = 178/275 (64.73%), Query Frame = 1
Query:   37 AQAALAWLIEMGADEIVGEASVNRFAAVVAPPVVAAPVSK-----------VAPVA-----------APSSADA------CNSLAELQAALLALEEFPLKKTASNLCFADCNPQAEVMIIGDVPGRDEDIEGKVFAGQNLALLEKMLGAIGLSVASTSSFNFVP------WRPPGNRTLTDAEIQMCQPFILRAVELCRPKFILCLGGHPAQRLSGKSDGLLSLRGKWFDLAIGGKKIPVLASFHPSYLLKQPGQKRLAWRDLLSF--KEALDAH 753
            A AA+ WL+EMGADEI+G   VNR   V+ PP  AAP S+           V P A           +P ++DA      C +LA+++ ALL  +  PLKKTA+NLCFAD NPQA+VM+IG+ PGRDEDI+GK F G++  LL++ML AIGLS  + S  N V       WRPPGNRT TD E  MC PF+ RA+E+ +P+ I+CLG  P QRL GKS+G+L LRG+WFD   GG  IP+LA+ HP+YLL+QP QKRLAW D LS   K   DAH
Sbjct:    6 AAAAIEWLVEMGADEIIGSTPVNRL--VMPPPAPAAPASRPAGSVLNRPTLVRPAANAPEMRGAAQASPGNSDAAALAAQCATLADIEQALLRFDACPLKKTATNLCFADGNPQAQVMLIGEAPGRDEDIQGKPFVGRSGQLLDRMLTAIGLSRHAESPENSVYISNVIFWRPPGNRTPTDQETLMCLPFLRRAIEIKQPRLIVCLGATPTQRLIGKSEGILKLRGRWFDF--GG--IPLLATLHPAYLLRQPAQKRLAWCDFLSLQQKHKADAH 274          
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: UPI001907157B (LysE family translocator n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001907157B)

HSP 1 Score: 236 bits (601), Expect = 6.720e-73
Identity = 118/158 (74.68%), Postives = 137/158 (86.71%), Query Frame = 2
Query:  746 MPISSADLLIFLTAALSLNLTPGNDMTYVLGQSLKGGPRTGISASLGIAGGSLIHLGFVALGVAVILAQNPLLFDLIRYAGAAYLVWIAYTTLTSPISALAQESTERSTFAAFRDGVLVNLFNPKIIVFMFAFLPPFIRPENGSPLLQLFILGMIFNV 1219
            MPI++ DLL+FLTAAL+LNLTPGNDM YVLGQS+KGG R+GI+AS GIA GS IHL  VALG+AV+L Q P +FD IR+AGAAYLVWIAY TLT+PI  L  E  +RS FAA+RDGVLVN+FNPK I+FMFAFLPPFIRPENG+PL+QLFILGMIFN+
Sbjct:    1 MPINTTDLLVFLTAALTLNLTPGNDMMYVLGQSIKGGARSGIAASFGIATGSFIHLVLVALGIAVVLTQYPAIFDAIRWAGAAYLVWIAYKTLTTPIGNLQTEGRQRSLFAAWRDGVLVNVFNPKTIIFMFAFLPPFIRPENGAPLMQLFILGMIFNI 158          
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: UPI001907B3A5 (uracil-DNA glycosylase n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI001907B3A5)

HSP 1 Score: 236 bits (602), Expect = 4.280e-72
Identity = 141/278 (50.72%), Postives = 179/278 (64.39%), Query Frame = 1
Query:   37 AQAALAWLIEMGADEIVGEASVNRFAAVVAPPVVAAPVSKV-----------------APV-----AAPSSA---DA------CNSLAELQAALLALEEFPLKKTASNLCFADCNPQAEVMIIGDVPGRDEDIEGKVFAGQNLALLEKMLGAIGLSVASTSS------FNFVPWRPPGNRTLTDAEIQMCQPFILRAVELCRPKFILCLGGHPAQRLSGKSDGLLSLRGKWFDLAIGGKKIPVLASFHPSYLLKQPGQKRLAWRDLLSFKEAL--DAH 753
            A AA+ WL+EMGADEI+G   VNR    VAPP  AAP  +                  AP      A P+SA   DA      C +LA+++ AL+  +  PLKKTA+NLCFAD NP A VM+IG+ PGRDEDI+GK F G++  LL++ML AIGL+  +          N + WRPPGNRT TD E  MC PF+ RA+E+ +P++I+CLG  P QRL GKS+G+L LRG+WFD   GG  IP+LA+ HP+YLL+QP QKRLAWRDLLS ++ L  DAH
Sbjct:    6 AAAAIEWLVEMGADEIIGAEPVNRL---VAPPPQAAPAPQXXXXXXXXXXXXXXXXXXAPATDMRAATPASAGNSDAAALAAQCATLADIEQALMRYDACPLKKTATNLCFADGNPDAPVMLIGEAPGRDEDIQGKPFVGRSGQLLDRMLKAIGLARHNEKPEEAVYISNVIFWRPPGNRTPTDQETLMCLPFLKRAIEIKKPRYIVCLGATPTQRLIGKSEGILKLRGRWFDF--GG--IPLLATLHPAYLLRQPAQKRLAWRDLLSLQQKLKADAH 276          
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: UPI0019B506E6 (LysE family translocator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019B506E6)

HSP 1 Score: 219 bits (557), Expect = 7.860e-66
Identity = 112/158 (70.89%), Postives = 130/158 (82.28%), Query Frame = 2
Query:  746 MPISSADLLIFLTAALSLNLTPGNDMTYVLGQSLKGGPRTGISASLGIAGGSLIHLGFVALGVAVILAQNPLLFDLIRYAGAAYLVWIAYTTLTSPISALAQESTERSTFAAFRDGVLVNLFNPKIIVFMFAFLPPFIRPENGSPLLQLFILGMIFNV 1219
            MPI  +DL+IF  AAL+LNLTPGNDM +VLGQ++KGG R GI+ASLGIA G L+HL  VA GVAVILA++P +FD IRYAGAAYLVW+A   L  P +A    +T R +FAA+RDGVLVN+FNPKI+VFMFA LPPFIRPENG PLLQLFILGMIFNV
Sbjct:    1 MPIEWSDLIIFTAAALALNLTPGNDMMFVLGQAIKGGTRAGIAASLGIATGLLVHLALVAAGVAVILAEHPAVFDAIRYAGAAYLVWLAIKILRQPQAAFDANATRRGSFAAWRDGVLVNVFNPKIVVFMFALLPPFIRPENGMPLLQLFILGMIFNV 158          
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: A0A8J7SKD3_9PROT (Type-4 uracil-DNA glycosylase n=2 Tax=Marivibrio halodurans TaxID=2039722 RepID=A0A8J7SKD3_9PROT)

HSP 1 Score: 211 bits (538), Expect = 2.400e-62
Identity = 127/286 (44.41%), Postives = 165/286 (57.69%), Query Frame = 1
Query:   49 LAWLIEMGADEIVGEASVNRFAAVVA------------------PPVVAAPVS-------------KVAPVAAPSSA-------DACNSLAELQAALLALEEFPLKKTASNLCFADCNPQAEVMIIGDVPGRDEDIEGKVFAGQNLALLEKMLGAIGLSVASTSSFNFVPWRPPGNRTLTDAEIQMCQPFILRAVELCRPKFILCLGGHPAQRLSGKSDGLLSLRGKWFDLAIGGK--KIPVLASFHPSYLLKQPGQKRLAWRDLLSFKEALDAH*FCRSFDFPDG 786
            LAW I MGADE  G A ++RFAA  A                  PP   AP S             + AP+ A  +A        AC +L EL+AAL + +  PLK+TA+NL F D NP A+VM+IG+ PGRDED++GK F G +  LL++M+G IGL+       N + WRPPGNRT TDAE+  C+PFI R ++L RPK +L +GG  A+ L G   G+  LRG+WFD   GG+   +P LA+FHP+YLL+ P  KRLAWRDLLS +  +      R  D  DG
Sbjct:    2 LAWQIAMGADEATGTAPLDRFAASEAAAAXXXXPAAATPAPHPSPPXSKAPASPRTPSPTARGQTSEDAPLGAAEAAALGNRAAGACGTLEELRAALESFDGCPLKQTATNLVFGDGNPAADVMLIGEAPGRDEDMQGKPFVGVSGQLLDRMMGFIGLNRERFYITNVLYWRPPGNRTPTDAEVAACRPFIARHIQLVRPKILLLVGGKSAKSLLGTEQGITKLRGRWFDYDAGGEVGTLPALATFHPAYLLRSPAMKRLAWRDLLSLQRRM------RDLDLIDG 281          
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: UPI0019C64788 (Uracil-DNA glycosylase n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI0019C64788)

HSP 1 Score: 208 bits (530), Expect = 1.510e-61
Identity = 120/249 (48.19%), Postives = 158/249 (63.45%), Query Frame = 1
Query:   37 AQAALAWLIEMGADEIVGEASVNRFAAVVAP-PVVAAPVSKVA---PVAAP------SSADACNS--LAELQAALLALEEFPLKKTASNLCFADCNPQAEVMIIGDVPGRDEDIEGKVFAGQNLALLEKMLGAIGLSVASTSSFNFVPWRPPGNRTLTDAEIQMCQPFILRAVELCRPKFILCLGGHPAQRLSGKSDGLLSLRGKWFDLAIGGKKIPVLASFHPSYLLKQPGQKRLAWRDLLSFKEALD 747
            AQA L W   MG DE +GEA V+ FAAVV P P  A+ V  +A   PV+AP       SA A N+  LAEL+A + A E   LK+TA +LCFA     A +M+IG+ PGRDED++GK F G+   LL++ML AIGLS       N V WRPPGNRT T  E++ C PF+ R +EL  P+ ++ LGG  A+ + G ++G++ LRGKW + A  G+ I  L + HP++LL+ P  KRLAWRDLL  KE L+
Sbjct:    9 AQALLLWYAAMGVDEAIGEAPVDCFAAVVEPSPAPASQVKGIARPLPVSAPLLKTGPGSAAARNAATLAELEALVAAFEGCALKRTAKSLCFARGREDARIMLIGEAPGRDEDLKGKPFVGRAGQLLDRMLAAIGLSENQVYITNTVYWRPPGNRTPTPEEVEACAPFLARQIELLDPQVLVLLGGAAAKNILGMAEGIMRLRGKWLNYACAGRDIATLPTLHPAFLLRNPEHKRLAWRDLLLVKERLE 257          
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: X5MGA6_9HYPH (Type-4 uracil-DNA glycosylase n=1 Tax=Candidatus Phaeomarinobacter ectocarpi TaxID=1458461 RepID=X5MGA6_9HYPH)

HSP 1 Score: 208 bits (530), Expect = 3.120e-61
Identity = 119/261 (45.59%), Postives = 158/261 (60.54%), Query Frame = 1
Query:   49 LAWLIEMGADEIVGEASVNRFAAVVAP------------PVVAAPVSKVAPVA-----------APSSADACNSLAELQAALLALEEFPLKKTASNLCFADCNPQAEVMIIGDVPGRDEDIEGKVFAGQNLALLEKMLGAIGLSVASTSSFNFVPWRPPGNRTLTDAEIQMCQPFILRAVELCRPKFILCLGGHPAQRLSGKSDGLLSLRGKWFDL---AIGG---KKIPVLASFHPSYLLKQPGQKRLAWRDLLSFKEAL 744
            L W +E GADE +G+  ++R AAV  P            P    P+   AP A           A + A A ++L +L+ A+      PLK TA NL FAD NPQA++M++G+ PGRDEDI+G  F G++  LL++ML +IGLS  +    N +PWRPPGNRT T AE  MC PFILR +EL  PK ++C+GG  A+ L G   G+  LRG+W D    AIGG   + +P +A  HP+YLL+QP QKRLAWRDLLS K+ +
Sbjct:   18 LRWFVEAGADEAIGDEPIDRLAAVPEPEPRVSNGGKPPLPGAKQPIRPQAPQAELADDKAAIDDARALAAAASNLDDLRNAMAGFAGCPLKATAKNLVFADGNPQAKIMLVGEAPGRDEDIQGLPFVGRSGQLLDRMLASIGLSRETVYISNVLPWRPPGNRTPTPAETAMCLPFILRHIELVGPKVLVCIGGVSAKELFGTKTGITRLRGQWKDFDPAAIGGPAGQTMPAIAMLHPAYLLRQPAQKRLAWRDLLSLKDKM 278          
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Match: A0A2W4MZA2_9PROT (Type-4 uracil-DNA glycosylase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2W4MZA2_9PROT)

HSP 1 Score: 208 bits (530), Expect = 3.520e-61
Identity = 124/272 (45.59%), Postives = 157/272 (57.72%), Query Frame = 1
Query:   28 PGGAQAALAWL----IEMGADEIVGEASVNRFAAVVAPPVVAAPVSK--VAPV--------------------------AAPSSADACNSLAELQAALLALEEFPLKKTASNLCFADCNPQAEVMIIGDVPGRDEDIEGKVFAGQNLALLEKMLGAIGLSVASTSSFNFVPWRPPGNRTLTDAEIQMCQPFILRAVELCRPKFILCLGGHPAQRLSGKSDGLLSLRGKWFDLAIGGKKIPVLASFHPSYLLKQPGQKRLAWRDLLSFKEALD 747
            PG  +AAL  L    +E G D  + E   NRFA    P   A+P     V+PV                          AA ++A A  SL EL+ AL A +   LK TA NL FAD  P A VM++G+ PGR+EDI+GK F G++  LL++ML AIGL  +S    N VPWRPPGNRT T  E  +C+PFI R +ELC P  ++CLGG  AQ L G  +G+L  RGKWFD   G + I  LA+ HP+YLL+QP QKRLAWRDL + ++ LD
Sbjct:    8 PGAREAALEALLDFYVEAGVDLAIDETPHNRFAEPDRPQPAASPAGTPAVSPVQRQPAQASSAAAPAFDATASADETALAARATARAATSLEELREALAAFDGCALKATAKNLVFADGTPGARVMLVGEAPGREEDIQGKPFVGRSGQLLDRMLAAIGLDRSSVYIANIVPWRPPGNRTPTPQEAAICRPFIERQIELCDPDVLVCLGGPSAQALLGVREGILRTRGKWFDYDTGRRTIRALATLHPAYLLRQPAQKRLAWRDLRALRKVLD 279          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17800.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001987A92C2.160e-7752.01Uracil-DNA glycosylase n=1 Tax=Hyphomicrobiales ba... [more]
A0A2W2AJI3_9HYPH3.980e-7549.81Type-4 uracil-DNA glycosylase n=1 Tax=Aestuariivir... [more]
A0A6G6WVD1_9HYPH4.500e-7451.64Type-4 uracil-DNA glycosylase n=1 Tax=Nordella sp.... [more]
UPI001907157B6.720e-7374.68LysE family translocator n=1 Tax=Aestuariivirga sp... [more]
UPI001907B3A54.280e-7250.72uracil-DNA glycosylase n=1 Tax=Aestuariivirga sp. ... [more]
UPI0019B506E67.860e-6670.89LysE family translocator n=1 Tax=Hyphomicrobiales ... [more]
A0A8J7SKD3_9PROT2.400e-6244.41Type-4 uracil-DNA glycosylase n=2 Tax=Marivibrio h... [more]
UPI0019C647881.510e-6148.19Uracil-DNA glycosylase n=1 Tax=Methyloceanibacter ... [more]
X5MGA6_9HYPH3.120e-6145.59Type-4 uracil-DNA glycosylase n=1 Tax=Candidatus P... [more]
A0A2W4MZA2_9PROT3.520e-6145.59Type-4 uracil-DNA glycosylase n=2 Tax=Proteobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17800contigP-wetherbeei_contig17800:3..1221 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog402881.Plav_0718
Preferred nameudgA
PFAMsUDG
Model size1219
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K21929
KEGG Pathwayko03410,map03410
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.97e-63
EggNOG OGsCOG1573@1|root,COG1573@2|Bacteria,1MWX1@1224|Proteobacteria,2TT4Q@28211|Alphaproteobacteria,1JNSE@119043|Rhodobiaceae
EC3.2.2.27
DescriptionUracil DNA glycosylase superfamily
Cds size756
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186127.5888226-UTR-P-wetherbeei_contig17800:2..4651683186127.5888226-UTR-P-wetherbeei_contig17800:2..465Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17800 3..465 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186127.6023076-CDS-P-wetherbeei_contig17800:465..12211683186127.6023076-CDS-P-wetherbeei_contig17800:465..1221Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17800 466..1221 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17800.1.1prot_P-wetherbeei_contig17800.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17800 466..1221 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17800.1.1

>prot_P-wetherbeei_contig17800.1.1 ID=prot_P-wetherbeei_contig17800.1.1|Name=mRNA_P-wetherbeei_contig17800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
MQTKQNDMSPGGAQAALAWLIEMGADEIVGEASVNRFAAVVAPPVVAAPV
SKVAPVAAPSSADACNSLAELQAALLALEEFPLKKTASNLCFADCNPQAE
VMIIGDVPGRDEDIEGKVFAGQNLALLEKMLGAIGLSVASTSSFNFVPWR
PPGNRTLTDAEIQMCQPFILRAVELCRPKFILCLGGHPAQRLSGKSDGLL
SLRGKWFDLAIGGKKIPVLASFHPSYLLKQPGQKRLAWRDLLSFKEALDA
H*
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mRNA from alignment at P-wetherbeei_contig17800:3..1221-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17800.1.1 ID=mRNA_P-wetherbeei_contig17800.1.1|Name=mRNA_P-wetherbeei_contig17800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1219bp|location=Sequence derived from alignment at P-wetherbeei_contig17800:3..1221- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAAACAAAGCAAAACGACATGAGCCCCGGCGGCGCCCAGGCAGCACT TGCCTGGCTGATCGAGATGGGGGCCGACGAGATTGTGGGCGAGGCCTCGG TCAACCGCTTTGCGGCGGTGGTTGCCCCGCCTGTGGTTGCGGCTCCCGTC AGCAAGGTTGCACCCGTTGCGGCTCCTTCATCGGCAGACGCCTGCAATTC ACTGGCTGAGCTTCAGGCGGCATTGCTTGCGCTGGAAGAATTCCCGCTGA AAAAGACCGCCAGCAATTTGTGCTTTGCCGATTGCAACCCGCAGGCCGAA GTTATGATCATCGGCGATGTGCCGGGGCGCGATGAAGACATCGAGGGCAA GGTGTTCGCCGGGCAAAACCTTGCGCTGCTGGAAAAAATGCTAGGGGCAA TCGGGCTGTCGGTTGCATCCACCAGTTCATTCAATTTCGTCCCGTGGCGG CCGCCGGGAAACCGCACGCTGACCGACGCTGAAATCCAGATGTGCCAACC TTTCATCCTGCGCGCCGTTGAGCTTTGCCGGCCGAAATTCATTCTCTGCC TTGGCGGCCATCCGGCGCAGCGCCTTTCGGGCAAGAGTGACGGGCTGCTA TCGCTGCGCGGCAAATGGTTTGATCTCGCCATCGGGGGAAAGAAAATCCC GGTGCTCGCAAGTTTCCATCCGAGCTACCTGCTGAAGCAGCCGGGCCAGA AGCGCCTGGCCTGGCGCGACCTGCTCTCGTTCAAGGAAGCTCTTGATGCC CATTAGTTCTGCCGATCTTTTGATTTTCCTGACGGCGGCGCTGAGCCTCA ATCTCACGCCGGGCAACGACATGACGTATGTGCTGGGGCAATCCCTGAAG GGCGGGCCACGGACAGGAATATCAGCGAGCCTTGGCATTGCCGGCGGCTC GCTTATCCATCTTGGATTTGTAGCGCTCGGCGTTGCCGTCATTCTGGCGC AGAATCCACTTTTGTTTGATCTCATCCGCTATGCGGGTGCGGCCTATCTT GTCTGGATTGCCTACACCACACTCACATCGCCGATATCGGCGCTTGCTCA GGAGAGTACCGAGCGCAGCACATTTGCGGCTTTCCGCGACGGGGTTCTGG TGAACCTGTTCAATCCCAAGATCATTGTCTTCATGTTTGCTTTCCTGCCG CCGTTCATTAGGCCGGAAAATGGTTCGCCGCTTTTGCAGCTTTTCATTTT GGGGATGATTTTCAATGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17800:3..1221-

>mRNA_P-wetherbeei_contig17800.1.1 ID=mRNA_P-wetherbeei_contig17800.1.1|Name=mRNA_P-wetherbeei_contig17800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig17800:3..1221- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAAACAAAGCAAAACGACATGAGCCCCGGCGGCGCCCAGGCAGCACT
TGCCTGGCTGATCGAGATGGGGGCCGACGAGATTGTGGGCGAGGCCTCGG
TCAACCGCTTTGCGGCGGTGGTTGCCCCGCCTGTGGTTGCGGCTCCCGTC
AGCAAGGTTGCACCCGTTGCGGCTCCTTCATCGGCAGACGCCTGCAATTC
ACTGGCTGAGCTTCAGGCGGCATTGCTTGCGCTGGAAGAATTCCCGCTGA
AAAAGACCGCCAGCAATTTGTGCTTTGCCGATTGCAACCCGCAGGCCGAA
GTTATGATCATCGGCGATGTGCCGGGGCGCGATGAAGACATCGAGGGCAA
GGTGTTCGCCGGGCAAAACCTTGCGCTGCTGGAAAAAATGCTAGGGGCAA
TCGGGCTGTCGGTTGCATCCACCAGTTCATTCAATTTCGTCCCGTGGCGG
CCGCCGGGAAACCGCACGCTGACCGACGCTGAAATCCAGATGTGCCAACC
TTTCATCCTGCGCGCCGTTGAGCTTTGCCGGCCGAAATTCATTCTCTGCC
TTGGCGGCCATCCGGCGCAGCGCCTTTCGGGCAAGAGTGACGGGCTGCTA
TCGCTGCGCGGCAAATGGTTTGATCTCGCCATCGGGGGAAAGAAAATCCC
GGTGCTCGCAAGTTTCCATCCGAGCTACCTGCTGAAGCAGCCGGGCCAGA
AGCGCCTGGCCTGGCGCGACCTGCTCTCGTTCAAGGAAGCTCTTGATGCC
CATTAG
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