mRNA_P-wetherbeei_contig1776.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A6H5LB75_9PHAE (Ribonuclease P n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB75_9PHAE) HSP 1 Score: 209 bits (533), Expect = 7.290e-54 Identity = 192/722 (26.59%), Postives = 247/722 (34.21%), Query Frame = 1
Query: 157 SAEANPAKAADAAQQVFSDLLAAG-FKPPESAFTALLRACCRDGRLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVREKARANE-------LDLGEREYLSLIKACTAAKDAAAFEAVMADYREDVLRSRSRESWDTLRAFFEA---------------------------------------------------------------------------------------------VPPAAMXXXXXXXXXXXXXXXS---------------------------------------AEGVXXXXXXXXXXXXSAEMACAAPI---------EVSAIPEKXXXXXXXXXXXXXXXXXXXXXXXXXXXCACCGTVLESIELSPADTERLLLQVESLVCTSDVRTVQWNIFKACLEKKGRSSFDYVVDGANVGYFKKMAAAAGELADHRQIDAVVGQLKARGKRALVVLHSRHLEERSLAPASAAIVKRFDFXXXXXXXXXRGWGIACVRGSGGRPGQGCVLFSWRPRCLSSSAALLCTAWLWRWLLMGFDLLVLLLCEASISSLSHETAKNEHLPPFSARGMRHATGRRDGGRWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGI---RALVTHEPPLYSKRIQRSPTGAGGAWHFPLEGSEEWLCV 1866
SA+ N AA+AA Q+FSD G PESA+TA++RACCRDGR DRA + + + + EREYL LI ACT A+D F VM +Y +DVL+ RSR SWD L+++F+ PP+A S A+G + A P E S + C CG V+ SIELS D +RLL Q+E LVCT++ RT QW F+ LE++G+ ++ ++DGANVGY+K + GELAD RQ+D V + + GK+ LVVLHSRHL E+ L+ + I KR W+ ++ SC +NDDWYWLYAA + GG LVLTNDEMRDHHFSMLSHRSF RW+ERHQ RF F G GG R ++T EP YSKR Q+ +WH PLE S +WLC
Sbjct: 223 SAQDNTFAAAEAALQIFSDASKGGTVSLPESAYTAVIRACCRDGRADRAREALEALKQAGLKPRVRTYTPLLEAYSKLDGRLEDCMALWREAVSPPGGLQQGITMTEREYLHLIAACTRARDEKCFLEVMTEYMDDVLQPRSRHSWDVLKSWFKVGPNVIGNGYVKHREVAAATTARTKPEEGEIENPRSGELPDNGGISEGDGGESGQESTATSGAAAAAPTLAGDAAGAPGVGDSAPSLSKAVVATEPPSARPDGSHGTDSALAPASSSXXXXXXXQADGSSGDDATGAAATSPRAAGAYAVGRSFQADGCGGDDAMEDAPQADGDEAVGGPTPVAGEDAVEEASPRADAAGGEKEPPSGGTSGWIVTECYVRKDGTCENCGEVMRSIELSEDDEQRLLKQIEELVCTNEQRTHQWEGFRGWLERRGKQRYNVIIDGANVGYYKA-CLSEGELADLRQVDWAVKKFQDEGKKPLVVLHSRHLVEKRLSDEAKEIYKR---------------------------------------------------------------------------------------------------------WKEADMIQSCAPKNNDDWYWLYAAVYTGGSVLVLTNDEMRDHHFSMLSHRSFQRWKERHQARFYFGDWKG--EGGDDDEREVITEEPRSYSKRTQKGVD----SWHVPLERSRDWLCA 832
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A7S2SLT1_9STRA (Protein unc-45 homolog B n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLT1_9STRA) HSP 1 Score: 167 bits (422), Expect = 5.830e-39 Identity = 155/562 (27.58%), Postives = 209/562 (37.19%), Query Frame = 1
Query: 163 EANPAKAADAAQQVFSDLLAA-GFKPPESAFTALLRACCRDGRLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVREKARANELDLGEREYLSLIKACTAAKDAAAFEAVMADYREDVLRSRSRESWDTLRAFFEAVPPAAMXXXXXXXXXXXXXXXSAEGVXXXXXXXXXXXXSAEMACAAPIEVSAIPEKXXXXXXXXXXXXXXXXXXXXXXXXXXXCACCGTVLESIELSPADTERLLLQVESLVCTSDVRTVQWNIFKACLEKKGRSSFDYVVDGANVGYFKKMAAAAGELADHRQIDAVVGQLKARGKRALVVLHSRHLEERSLAPASAAIVKRFDFXXXXXXXXXRGWGIACVRGSGGRPGQGCVLFSWRPRCLSSSAALLCTAWLWRWLLMGFDLLVLLLCEASISSLSHETAKNEHLPPFSARGMRHATGRRDGGRWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGG---AWHFP 1836
+A P K + A ++ D A+ G E+A+T+LLR C R G +DR +V + ++L LGEREYL L++ T A A++ EDVL +RESW L +F + P AA AE V +E++ L SI+L + +R+L QV L T +W F LE+KGR++FD +VDGANVGYFK+ A + ++ QID VV +A+GKR L+ LH RHL ++L + + KR W+SE L + GSNDDW+WLYAA WL V+TNDEMRDHHF MLSHRSF RW+ERHQ+ + F G+ G R ++TH PP YS R+Q S G AWH P
Sbjct: 1584 DAAPGKYDEVAFSLYEDAKASSGSGLQEAAYTSLLRICSRRGDVDRTRALLEELRANGDRPRLRTYHPLLEGLVRAGDLDGAFQVHHEMLGDDLLLGEREYLLLLQVATQHGAADRASAILHGLSEDVLLP-TRESWKVLGDWFTS-PYAA-----------------AEWVISPDAPVDPVTGYSELS--------------------------------------------HLTLRSIDLGGEERQRMLEQVSELALTGKDGAAKWAGFTGWLERKGRTAFDVLVDGANVGYFKQNYPGAPKHVNYEQIDCVVRHFQAQGKRVLLFLHQRHLFPQNLPASCVDLTKR---------------------------------------------------------------------------------------------------------WKSEKTLFTTPVGSNDDWFWLYAAVWLEN-VQVVTNDEMRDHHFRMLSHRSFQRWKERHQIHYEFG-GFDSSLRG-RRVITHVPPTYSIRMQASTDPTSGEVTAWHVP 1974
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A7S2SKI7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKI7_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.590e-38 Identity = 107/326 (32.82%), Postives = 138/326 (42.33%), Query Frame = 1
Query: 868 LESIELSPADTERLLLQVESLVCTSDVRTVQWNIFKACLEKKGRSSFDYVVDGANVGYFKKMAAAAGELADHRQIDAVVGQLKARGKRALVVLHSRHLEERSLAPASAAIVKRFDFXXXXXXXXXRGWGIACVRGSGGRPGQGCVLFSWRPRCLSSSAALLCTAWLWRWLLMGFDLLVLLLCEASISSLSHETAKNEHLPPFSARGMRHATGRRDGGRWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGG---AWHFP 1836
L SI+L + +R+L QV L T +W F LE+KGR++FD +VDGANVGYFK+ A + ++ QID VV +A+GKR L+ LH RHL ++L + + KR W+SE L + GSNDDW+WLYAA WL V+TNDEMRDHHF MLSHRSF RW+ERHQ+ + F G+ G R ++TH PP YS R+Q S G AWH P
Sbjct: 82 LRSIDLGGEERQRMLEQVSELALTGKDGAAKWAGFTGWLERKGRTAFDVLVDGANVGYFKQNYPGAPKHVNYEQIDCVVRHFQAQGKRVLLFLHQRHLFPQNLPASCVDLTKR---------------------------------------------------------------------------------------------------------WKSEKTLFTTPVGSNDDWFWLYAAVWLEN-VQVVTNDEMRDHHFRMLSHRSFQRWKERHQIHYEFG-GFDSSLRG-RRVITHVPPTYSIRMQASTDPTSGEVTAWHVP 299
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A835YSR3_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR3_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.160e-34 Identity = 65/103 (63.11%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 1561 SNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGAWHFPLEGSEEWLCVT 1869
+NDDWYWL+AA +GGR LV+TNDEMRDHHF MLSHRSF RW+ERHQV F F G G R ++ EP YSKRIQR+ + AWHFPLEG + WLCVT
Sbjct: 4 NNDDWYWLWAAVRVGGRVLVVTNDEMRDHHFLMLSHRSFQRWKERHQVHFCF----GDWRDGRRQVLVREPRKYSKRIQRASDDS--AWHFPLEGEDRWLCVT 100
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: D7FNK8_ECTSI (PRORP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK8_ECTSI) HSP 1 Score: 132 bits (332), Expect = 9.330e-33 Identity = 65/113 (57.52%), Postives = 75/113 (66.37%), Query Frame = 1
Query: 1537 VLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGG---IRALVTHEPPLYSKRIQRSPTGAGGAWHFPLEGSEEWLCV 1866
++ SC +NDDWYWLYAA + GG LVLTNDEMRDHHFSMLSHRSF RW+ERHQ RF F G GG R ++T EP YSKR Q+ +WH PLE S +WLC
Sbjct: 1 MIQSCAPKNNDDWYWLYAAVYTGGSVLVLTNDEMRDHHFSMLSHRSFQRWKERHQARFYFGDWKG--EGGDDDAREVITEEPRSYSKRTQKGVD----SWHVPLERSRDWLCA 107
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: F0XWY5_AURAN (Ribonuclease P n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWY5_AURAN) HSP 1 Score: 137 bits (344), Expect = 5.170e-30 Identity = 110/348 (31.61%), Postives = 141/348 (40.52%), Query Frame = 1
Query: 847 CACCGTVLESIELSPADTERLLLQVESLVCTSDV-----------------RTVQWNIFKACLEKKGRSSFDYVVDGANVGYFKKMAAAAGELADHRQIDAVVGQLKARGKRALVVLHSRHLEERSLAPASAAIVKRFDFXXXXXXXXXRGWGIACVRGSGGRPGQGCVLFSWRPRCLSSSAALLCTAWLWRWLLMGFDLLVLLLCEASISSLSHETAKNEHLPPFSARGMRHATGRRDGGRWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGA-WHFP 1836
CA G L S++LS A+ LL Q+E LV D R QW FKA L K G + +D ++DGANVGY A A + D RQ+DAV+ + G+RALVVLH+RHL++ L P SAR + HA WR L SC +NDDWYWLYAA G +L+++NDEMRDHHF MLS R+F W+ERH +F ++G GG R + H+PP +S R QR+ G A WH P
Sbjct: 349 CAVTGAKLRSLDLSEAERALLLEQIEGLVPAVDAKFEGQSSAQELERLAGRRMAQWRTFKAWLAKAG-APYDCIIDGANVGYHGANYAGAPDAVDFRQVDAVLRKCIDGGRRALVVLHARHLQDDRL-------------------------------------------------------------------------------------------------PASARPVLHA--------WRRSKSLYSCALRNNDDWYWLYAAVAAGPGSLLVSNDEMRDHHFGMLSARAFLVWKERHLAKF--ELGGWRRDGG-RDVTIHDPPPFSVRAQRNDPGEALARWHLP 587
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A7S3YD57_HETAK (Ribonuclease P n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD57_HETAK) HSP 1 Score: 119 bits (299), Expect = 6.530e-28 Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 1
Query: 1519 RWRSEGVLASCERGS-NDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGA--WHFPLEGSEEWLCV 1866
RWR+EG L +G NDDWYWL+A GG TL++TND MRDHHF+MLSHRSF RWRERH+ F F GH R++ +PP+YS+R+Q+ G+ WH P WLC+
Sbjct: 20 RWRAEGRLVEVPKGGPNDDWYWLWATLKCGGDTLMITNDLMRDHHFAMLSHRSFLRWRERHKTSFKF----GHGEPYKRSVTLMKPPVYSQRMQKGDQDNEGSSCWHIPDAEVLNWLCI 134
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A2D4BKK1_PYTIN (Ribonuclease P n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKK1_PYTIN) HSP 1 Score: 128 bits (322), Expect = 2.530e-27 Identity = 59/114 (51.75%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 1522 WRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGAWHFPLEGSEEWLC 1863
W+ ++ +C G+NDDWYWLYAA LGGRTLV+TNDEMRDHHF M+ +RSF RW+ERHQV ++ + + EP +YS R QR G WHFPL S EWLC
Sbjct: 501 WKERNIMYNCRSGNNDDWYWLYAAVKLGGRTLVVTNDEMRDHHFQMIHNRSFGRWKERHQVHYSIH--------NEKHVKVQEPRVYSARPQR----IGANWHFPLAESSEWLC 602
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A5D6XIS8_9STRA (Ribonuclease P n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIS8_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.170e-27 Identity = 61/117 (52.14%), Postives = 76/117 (64.96%), Query Frame = 1
Query: 1519 RWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGAWHFP--LEGSEEWLC 1863
RW + G + +CE G+NDDWYWLYAA LGGRTL +TNDEMRDHHF M+ +R+F RW+ERH+ R++ +G + EP +S R QRS G AWHFP GSE WLC
Sbjct: 360 RWAASGEMYNCEAGNNDDWYWLYAAVKLGGRTLAVTNDEMRDHHFQMIHNRAFVRWKERHRARYS--------AGAEQPWAVAEPAAFSARPQRSRDGE--AWHFPPAAPGSETWLC 466
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A067BCH7_SAPPC (Ribonuclease P n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BCH7_SAPPC) HSP 1 Score: 115 bits (287), Expect = 1.060e-26 Identity = 56/115 (48.70%), Postives = 70/115 (60.87%), Query Frame = 1
Query: 1522 WRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGAWHFPLEGSEEWLCV 1866
W+ +GV+ +C G+NDDWYWLYAA LGGRTLV++NDEMRDHHFSM+++ F RW+ERH V Y SG EP +YSKR Q +WHFP + WL
Sbjct: 5 WKDDGVMFNCRPGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFSMIANVDFQRWKERHLVH------YDKVSG---KFSFDEPSVYSKRSQ----ALAHSWHFPTPNKDAWLVA 106 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1776.1.3 >prot_P-wetherbeei_contig1776.1.3 ID=prot_P-wetherbeei_contig1776.1.3|Name=mRNA_P-wetherbeei_contig1776.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=533bp MEALGVLPRIRTFSPILAECGAAGRLELALEVREKARANELDLGEREYLSback to top mRNA from alignment at P-wetherbeei_contig1776:100..4178+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1776.1.3 ID=mRNA_P-wetherbeei_contig1776.1.3|Name=mRNA_P-wetherbeei_contig1776.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4079bp|location=Sequence derived from alignment at P-wetherbeei_contig1776:100..4178+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1776:100..4178+ >mRNA_P-wetherbeei_contig1776.1.3 ID=mRNA_P-wetherbeei_contig1776.1.3|Name=mRNA_P-wetherbeei_contig1776.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1599bp|location=Sequence derived from alignment at P-wetherbeei_contig1776:100..4178+ (Phaeothamnion wetherbeei SAG_119_79)back to top |