prot_P-wetherbeei_contig1776.1.3 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1776.1.3
Unique Nameprot_P-wetherbeei_contig1776.1.3
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length533
Homology
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A6H5LB75_9PHAE (Ribonuclease P n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB75_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 7.030e-53
Identity = 126/343 (36.73%), Postives = 159/343 (46.36%), Query Frame = 0
Query:  177 CACCGTVLESIELSPADTERLLLQVESLVCTSDVRTVQWNIFKACLEKKGRSSFDYVVDGANVGYFKKMAAAAGELADHRQIDAVVGQLKARGKRALVVLHSRHLEERSLAPASAAIVKRFDFXXXXXXXXXRGWGIACVRGSGGRPGQGCVLFSWRPRCLSSSAALLCTAWLWRWLLMGFDLLVLLLCEASISSLSHETAKNEHLPPFSARGMRHATGRRDGGRWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGI---RALVTHEPPLYSKRIQRSPTGAGGAWHFPLEGSEEWLCV 516
            C  CG V+ SIELS  D +RLL Q+E LVCT++ RT QW  F+  LE++G+  ++ ++DGANVGY+K    + GELAD RQ+D  V + +  GK+ LVVLHSRHL E+ L+  +  I KR                                                                                                         W+   ++ SC   +NDDWYWLYAA + GG  LVLTNDEMRDHHFSMLSHRSF RW+ERHQ RF F    G   GG    R ++T EP  YSKR Q+       +WH PLE S +WLC 
Sbjct:  602 CENCGEVMRSIELSEDDEQRLLKQIEELVCTNEQRTHQWEGFRGWLERRGKQRYNVIIDGANVGYYKA-CLSEGELADLRQVDWAVKKFQDEGKKPLVVLHSRHLVEKRLSDEAKEIYKR---------------------------------------------------------------------------------------------------------WKEADMIQSCAPKNNDDWYWLYAAVYTGGSVLVLTNDEMRDHHFSMLSHRSFQRWKERHQARFYFGDWKG--EGGDDDEREVITEEPRSYSKRTQKGVD----SWHVPLERSRDWLCA 832          
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A7S2SLT1_9STRA (Protein unc-45 homolog B n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLT1_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.100e-42
Identity = 149/509 (29.27%), Postives = 199/509 (39.10%), Query Frame = 0
Query:    1 MEALGVLPRIRTFSPILAECGAAGRLELALEVREKARANELDLGEREYLSLIKACTAAKDAAAFEAVMADYREDVLRSRSRESWDTLRAFFEAVPPAAMXXXXXXXXXXXXXXXSAEGVXXXXXXXXXXXASAEMACAAPIEVSAIPEKXXXXXXXXXXXXXXXXXXXXXXXXXXXCACCGTVLESIELSPADTERLLLQVESLVCTSDVRTVQWNIFKACLEKKGRSSFDYVVDGANVGYFKKMAAAAGELADHRQIDAVVGQLKARGKRALVVLHSRHLEERSLAPASAAIVKRFDFXXXXXXXXXRGWGIACVRGSGGRPGQGCVLFSWRPRCLSSSAALLCTAWLWRWLLMGFDLLVLLLCEASISSLSHETAKNEHLPPFSARGMRHATGRRDGGRWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGG---AWHFP 506
            + A G  PR+RT+ P+L     AG L+ A +V  +   ++L LGEREYL L++  T    A    A++    EDVL   +RESW  L  +F + P AA                 AE V             +E++                                               L SI+L   + +R+L QV  L  T      +W  F   LE+KGR++FD +VDGANVGYFK+    A +  ++ QID VV   +A+GKR L+ LH RHL  ++L  +   + KR                                                                                                         W+SE  L +   GSNDDW+WLYAA WL     V+TNDEMRDHHF MLSHRSF RW+ERHQ+ + F  G+     G R ++TH PP YS R+Q S     G   AWH P
Sbjct: 1637 LRANGDRPRLRTYHPLLEGLVRAGDLDGAFQVHHEMLGDDLLLGEREYLLLLQVATQHGAADRASAILHGLSEDVLLP-TRESWKVLGDWFTS-PYAA-----------------AEWVISPDAPVDPVTGYSELS--------------------------------------------HLTLRSIDLGGEERQRMLEQVSELALTGKDGAAKWAGFTGWLERKGRTAFDVLVDGANVGYFKQNYPGAPKHVNYEQIDCVVRHFQAQGKRVLLFLHQRHLFPQNLPASCVDLTKR---------------------------------------------------------------------------------------------------------WKSEKTLFTTPVGSNDDWFWLYAAVWLEN-VQVVTNDEMRDHHFRMLSHRSFQRWKERHQIHYEFG-GFDSSLRG-RRVITHVPPTYSIRMQASTDPTSGEVTAWHVP 1974          
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A7S2SKI7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKI7_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.800e-39
Identity = 107/326 (32.82%), Postives = 138/326 (42.33%), Query Frame = 0
Query:  184 LESIELSPADTERLLLQVESLVCTSDVRTVQWNIFKACLEKKGRSSFDYVVDGANVGYFKKMAAAAGELADHRQIDAVVGQLKARGKRALVVLHSRHLEERSLAPASAAIVKRFDFXXXXXXXXXRGWGIACVRGSGGRPGQGCVLFSWRPRCLSSSAALLCTAWLWRWLLMGFDLLVLLLCEASISSLSHETAKNEHLPPFSARGMRHATGRRDGGRWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGG---AWHFP 506
            L SI+L   + +R+L QV  L  T      +W  F   LE+KGR++FD +VDGANVGYFK+    A +  ++ QID VV   +A+GKR L+ LH RHL  ++L  +   + KR                                                                                                         W+SE  L +   GSNDDW+WLYAA WL     V+TNDEMRDHHF MLSHRSF RW+ERHQ+ + F  G+     G R ++TH PP YS R+Q S     G   AWH P
Sbjct:   82 LRSIDLGGEERQRMLEQVSELALTGKDGAAKWAGFTGWLERKGRTAFDVLVDGANVGYFKQNYPGAPKHVNYEQIDCVVRHFQAQGKRVLLFLHQRHLFPQNLPASCVDLTKR---------------------------------------------------------------------------------------------------------WKSEKTLFTTPVGSNDDWFWLYAAVWLEN-VQVVTNDEMRDHHFRMLSHRSFQRWKERHQIHYEFG-GFDSSLRG-RRVITHVPPTYSIRMQASTDPTSGEVTAWHVP 299          
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A835YSR3_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR3_9STRA)

HSP 1 Score: 136 bits (342), Expect = 7.060e-35
Identity = 65/103 (63.11%), Postives = 75/103 (72.82%), Query Frame = 0
Query:  415 SNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGAWHFPLEGSEEWLCVT 517
            +NDDWYWL+AA  +GGR LV+TNDEMRDHHF MLSHRSF RW+ERHQV F F    G    G R ++  EP  YSKRIQR+   +  AWHFPLEG + WLCVT
Sbjct:    4 NNDDWYWLWAAVRVGGRVLVVTNDEMRDHHFLMLSHRSFQRWKERHQVHFCF----GDWRDGRRQVLVREPRKYSKRIQRASDDS--AWHFPLEGEDRWLCVT 100          
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: D7FNK8_ECTSI (PRORP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK8_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 3.510e-33
Identity = 65/113 (57.52%), Postives = 75/113 (66.37%), Query Frame = 0
Query:  407 VLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGG---IRALVTHEPPLYSKRIQRSPTGAGGAWHFPLEGSEEWLCV 516
            ++ SC   +NDDWYWLYAA + GG  LVLTNDEMRDHHFSMLSHRSF RW+ERHQ RF F    G   GG    R ++T EP  YSKR Q+       +WH PLE S +WLC 
Sbjct:    1 MIQSCAPKNNDDWYWLYAAVYTGGSVLVLTNDEMRDHHFSMLSHRSFQRWKERHQARFYFGDWKG--EGGDDDAREVITEEPRSYSKRTQKGVD----SWHVPLERSRDWLCA 107          
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: F0XWY5_AURAN (Ribonuclease P n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWY5_AURAN)

HSP 1 Score: 138 bits (348), Expect = 2.950e-31
Identity = 146/531 (27.50%), Postives = 197/531 (37.10%), Query Frame = 0
Query:    1 MEALGVLPRIRTFSPILAECGAAGRLELALEVREKARANELDLGEREYLSLIKACTAAK-----DAAAFE--AVMADYREDVLRSRSRESWDTLRAFFEAVPPAAMXXXXXXXXXXXXXXXSAEGVXXXXXXXXXXXASAEMACAAPIEVSAIPEKXXXXXXXXXXXXXXXXXXXXXXXXXXXCACCGTVLESIELSPADTERLLLQVESLVCTSDV-----------------RTVQWNIFKACLEKKGRSSFDYVVDGANVGYFKKMAAAAGELADHRQIDAVVGQLKARGKRALVVLHSRHLEERSLAPASAAIVKRFDFXXXXXXXXXRGWGIACVRGSGGRPGQGCVLFSWRPRCLSSSAALLCTAWLWRWLLMGFDLLVLLLCEASISSLSHETAKNEHLPPFSARGMRHATGRRDGGRWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGA-WHFP 506
            M+A  +  ++RTFSP+L      G L  AL V  + R   ++L E E+++L+  C A +     DAA+    +V+ D   D   + SR +W   R +  A+   A                                      CA    VS                                CA  G  L S++LS A+   LL Q+E LV   D                  R  QW  FKA L K G + +D ++DGANVGY     A A +  D RQ+DAV+ +    G+RALVVLH+RHL++  L                                                                                                 P SAR + HA        WR    L SC   +NDDWYWLYAA   G  +L+++NDEMRDHHF MLS R+F  W+ERH  +F  ++G     GG R +  H+PP +S R QR+  G   A WH P
Sbjct:  234 MKARNLKLKLRTFSPLLKLRCRRGELAEALAVAAECRDKGIELSEAEHVALVD-CRAGRLEAGGDAASLPGASVLDDLAADC-HAPSRAAWPACRRYCAALGLTA--------------------------------------CAEESAVSG----------------------------DGACAVTGAKLRSLDLSEAERALLLEQIEGLVPAVDAKFEGQSSAQELERLAGRRMAQWRTFKAWLAKAG-APYDCIIDGANVGYHGANYAGAPDAVDFRQVDAVLRKCIDGGRRALVVLHARHLQDDRL-------------------------------------------------------------------------------------------------PASARPVLHA--------WRRSKSLYSCALRNNDDWYWLYAAVAAGPGSLLVSNDEMRDHHFGMLSARAFLVWKERHLAKF--ELGGWRRDGG-RDVTIHDPPPFSVRAQRNDPGEALARWHLP 587          
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A7S3YD57_HETAK (Ribonuclease P n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD57_HETAK)

HSP 1 Score: 119 bits (298), Expect = 3.630e-28
Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 0
Query:  401 RWRSEGVLASCERGS-NDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGA--WHFPLEGSEEWLCV 516
            RWR+EG L    +G  NDDWYWL+A    GG TL++TND MRDHHF+MLSHRSF RWRERH+  F F    GH     R++   +PP+YS+R+Q+      G+  WH P      WLC+
Sbjct:   20 RWRAEGRLVEVPKGGPNDDWYWLWATLKCGGDTLMITNDLMRDHHFAMLSHRSFLRWRERHKTSFKF----GHGEPYKRSVTLMKPPVYSQRMQKGDQDNEGSSCWHIPDAEVLNWLCI 134          
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A2D4BKK1_PYTIN (Ribonuclease P n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKK1_PYTIN)

HSP 1 Score: 128 bits (321), Expect = 8.320e-28
Identity = 59/114 (51.75%), Postives = 73/114 (64.04%), Query Frame = 0
Query:  402 WRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGAWHFPLEGSEEWLC 515
            W+   ++ +C  G+NDDWYWLYAA  LGGRTLV+TNDEMRDHHF M+ +RSF RW+ERHQV ++            + +   EP +YS R QR     G  WHFPL  S EWLC
Sbjct:  501 WKERNIMYNCRSGNNDDWYWLYAAVKLGGRTLVVTNDEMRDHHFQMIHNRSFGRWKERHQVHYSIH--------NEKHVKVQEPRVYSARPQR----IGANWHFPLAESSEWLC 602          
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A5D6XIS8_9STRA (Ribonuclease P n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIS8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.630e-27
Identity = 61/117 (52.14%), Postives = 76/117 (64.96%), Query Frame = 0
Query:  401 RWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGAWHFP--LEGSEEWLC 515
            RW + G + +CE G+NDDWYWLYAA  LGGRTL +TNDEMRDHHF M+ +R+F RW+ERH+ R++        +G  +     EP  +S R QRS  G   AWHFP    GSE WLC
Sbjct:  360 RWAASGEMYNCEAGNNDDWYWLYAAVKLGGRTLAVTNDEMRDHHFQMIHNRAFVRWKERHRARYS--------AGAEQPWAVAEPAAFSARPQRSRDGE--AWHFPPAAPGSETWLC 466          
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Match: A0A7S2BW17_9STRA (Ribonuclease P n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BW17_9STRA)

HSP 1 Score: 125 bits (315), Expect = 5.760e-27
Identity = 60/106 (56.60%), Postives = 69/106 (65.09%), Query Frame = 0
Query:  401 RWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSHRSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAGGAWHFP 506
            RWR + V+ +   GSNDDWYWLYAA WLGG   ++TNDEMRDHHF MLSHR F RW+ERHQV F F         G R +VT+ PP YS R+Q    G   AWH P
Sbjct:  477 RWREQKVMYNTPVGSNDDWYWLYAALWLGGSVQLVTNDEMRDHHFQMLSHRDFQRWKERHQVHFEFSR---EGIRGHREVVTYAPPAYSVRMQEDSKGK--AWHVP 577          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1776.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB75_9PHAE7.030e-5336.73Ribonuclease P n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
A0A7S2SLT1_9STRA1.100e-4229.27Protein unc-45 homolog B n=1 Tax=Rhizochromulina m... [more]
A0A7S2SKI7_9STRA1.800e-3932.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YSR3_9STRA7.060e-3563.11Ribonuclease P n=1 Tax=Tribonema minus TaxID=30337... [more]
D7FNK8_ECTSI3.510e-3357.52PRORP domain-containing protein n=1 Tax=Ectocarpus... [more]
F0XWY5_AURAN2.950e-3127.50Ribonuclease P n=1 Tax=Aureococcus anophagefferens... [more]
A0A7S3YD57_HETAK3.630e-2849.58Ribonuclease P n=1 Tax=Heterosigma akashiwo TaxID=... [more]
A0A2D4BKK1_PYTIN8.320e-2851.75Ribonuclease P n=1 Tax=Pythium insidiosum TaxID=11... [more]
A0A5D6XIS8_9STRA1.630e-2752.14Ribonuclease P n=1 Tax=Pythium brassicum TaxID=148... [more]
A0A7S2BW17_9STRA5.760e-2756.60Ribonuclease P n=1 Tax=Dictyocha speculum TaxID=35... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031595Protein-only RNase P, C-terminalPFAMPF16953PRORPcoord: 400..510
e-value: 8.8E-20
score: 71.2
coord: 172..284
e-value: 1.6E-11
score: 44.2
NoneNo IPR availableGENE3D3.40.50.11980coord: 194..299
e-value: 9.6E-15
score: 56.4
NoneNo IPR availableGENE3D3.40.50.11980coord: 370..469
e-value: 6.8E-26
score: 92.9
NoneNo IPR availablePANTHERPTHR13547UNCHARACTERIZEDcoord: 1..521
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..193
e-value: 2.2E-10
score: 42.5
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 1..93
e-value: 8.7E-14
score: 51.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1776contigP-wetherbeei_contig1776:630..3897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1776.1.3mRNA_P-wetherbeei_contig1776.1.3Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1776 100..4178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1776.1.3 ID=prot_P-wetherbeei_contig1776.1.3|Name=mRNA_P-wetherbeei_contig1776.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=533bp
MEALGVLPRIRTFSPILAECGAAGRLELALEVREKARANELDLGEREYLS
LIKACTAAKDAAAFEAVMADYREDVLRSRSRESWDTLRAFFEAVPPAAMA
AAAAAAAAVAAAAASAEGVAAAASAEEAPPASAEMACAAPIEVSAIPEKP
AVSEGAAAAVGDAWRVQETTVAADGTCACCGTVLESIELSPADTERLLLQ
VESLVCTSDVRTVQWNIFKACLEKKGRSSFDYVVDGANVGYFKKMAAAAG
ELADHRQIDAVVGQLKARGKRALVVLHSRHLEERSLAPASAAIVKRFDFS
FRFRFRFRRGWGIACVRGSGGRPGQGCVLFSWRPRCLSSSAALLCTAWLW
RWLLMGFDLLVLLLCEASISSLSHETAKNEHLPPFSARGMRHATGRRDGG
RWRSEGVLASCERGSNDDWYWLYAAAWLGGRTLVLTNDEMRDHHFSMLSH
RSFNRWRERHQVRFNFDMGYGHCSGGIRALVTHEPPLYSKRIQRSPTGAG
GAWHFPLEGSEEWLCVTGATSGQEGETGIASG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031595PRORP_C
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long