mRNA_P-wetherbeei_contig17554.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: A0A7S2RVM1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RVM1_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.700e-24 Identity = 67/140 (47.86%), Postives = 84/140 (60.00%), Query Frame = 1
Query: 58 PTTAVSANAFAVGSNQNAGNFLTDKPTTRVRAPPGGAST--FSISGNSEPEAT----PRQRFPNQKPEVNAAAXXXXXXXXAANGYVPVAVAANAQPVQ-RTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICLG 456
P VS+NA+A GSNQNAGN LTD+PTTRV APPGG+S+ F EP+A+ P+Q+ P V+ P PV R S+NA+ATGSNQN GNF+T++PTTRVHAPPGG ++I G
Sbjct: 104 PERKVSSNAYASGSNQNAGNVLTDRPTTRVHAPPGGSSSNIFGTDPVQEPKASWVAPPQQQPVEPTPIVDKTNVVHTAPAPGTKKVEP--------PVDSRVSSNAYATGSNQNCGNFITERPTTRVHAPPGGVSNITFG 235
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: A0A7S2F4N6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2F4N6_9DINO) HSP 1 Score: 93.6 bits (231), Expect = 2.930e-19 Identity = 58/130 (44.62%), Postives = 75/130 (57.69%), Query Frame = 1
Query: 67 AVSANAFAVGSNQNAGNFLTDKPTTRVRAPPGGASTFSISGNSEPEATPRQRFPNQKPEVNAAAXXXXXXXXAANGYVPVAVAANAQPVQRTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICLG 456
A SAN FA G+NQNAGN LT++ TTR+ PGG S+ + G+ E A P + Q E A+ P + AA V SAN FA+G+NQNAGN LT++ TTR+H PGG +S+CLG
Sbjct: 24 APSANRFASGANQNAGNVLTERSTTRLHQAPGGNSSLCLGGDVEKPA-PAKAAARQSDENLDASNTAPAQQGNDTIKPPSSGAAAGVGVAAPSANRFASGANQNAGNVLTERSTTRLHQAPGGNSSLCLG 152
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: A0A7S0NNN3_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NNN3_MICPS) HSP 1 Score: 93.6 bits (231), Expect = 2.810e-18 Identity = 54/128 (42.19%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 73 SANAFAVGSNQNAGNFLTDKPTTRVRAPPGGASTFSISGNSEPEATPRQRFPNQKPEVNAAAXXXXXXXXAANGYVPVAVAANAQPVQRTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICLG 456
S+NAFA GS+QN GN +TD+PTTR+ APPGG S+ A P R V + + V V + S+NAFA G++QN GNF+TD+PTTR+HAPPGG++ I G
Sbjct: 13 SSNAFANGSDQNCGNVITDRPTTRLHAPPGGHSSICFG------AAPEDR-------VRSTVATAQDKATNSPSAVQSQVFGAPSTARSNSSNAFANGADQNCGNFITDRPTTRLHAPPGGQSQISFG 127
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: D7FW98_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW98_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 2.310e-17 Identity = 69/197 (35.03%), Postives = 92/197 (46.70%), Query Frame = 1
Query: 1 QMWVDVPEDAE-PAPMEDGRPT--TAVSANAFAVGSNQNAGNFLTDKPTTRVRAPPGGASTFSI----SGNSEPEATPRQRFPNQKPEVNAAAXXXXXXXXAAN---GYVPVAVAA-----------------------------------NAQPVQRTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICLG 456
Q W++V E P+ PT TA+S+NA+A G NQNAGNFLTDKP TR+ APPGGAS+ S +G + A + +Q+ V A + G P+ + S+NA+A+GSNQN+GNF+T +PTTRV APPGG +SI G
Sbjct: 8 QQWIEVDVTEESPSKAAAASPTSSTALSSNAYASGVNQNAGNFLTDKPITRIHAPPGGASSISFGDQHTGPTAAAAGVTTKTQDQQGLVLGTPTQPTTPESAESTEEGPAPIPMMELPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSNAYASGSNQNSGNFMTGRPTTRVRAPPGGASSITFG 204
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: C1FHE0_MICCC (SAP domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FHE0_MICCC) HSP 1 Score: 92.0 bits (227), Expect = 4.070e-17 Identity = 53/128 (41.41%), Postives = 70/128 (54.69%), Query Frame = 1
Query: 73 SANAFAVGSNQNAGNFLTDKPTTRVRAPPGGASTFSISGNSEPEATPRQRFPNQKPEVNAAAXXXXXXXXAANGYVPVAVAANAQPVQRTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICLG 456
S+NAFA GS+QN GN +TD+PTTR+ APPGG S+ A P R V + + V + S+NAFA G++QN GNF+TD+PTTR+HAPPGG++ I G
Sbjct: 13 SSNAFANGSDQNCGNVITDRPTTRLHAPPGGHSSICFG------AAPEDR-------VRSTVATAQDKATNSPSAVXXXXXXXXXXARSNSSNAFANGADQNCGNFITDRPTTRLHAPPGGQSQISFG 127
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: A0A812UW40_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UW40_9DINO) HSP 1 Score: 87.0 bits (214), Expect = 1.540e-16 Identity = 54/134 (40.30%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 52 GRPTTAVSANAFAVGSNQNAGNFLTDKPTTRVRAPPGGASTFSISGNSEPEATPRQRFPNQKPEVNAAAXXXXXXXXAANGYVPVAVAANAQPVQRTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICL 453
GRP V++N++A GSNQN GN ++D P+TRV APPGG S+ + + P A P R P + + + A + P +A +P R S+N++A+G++QN GN LT PTTRV PPGG + + L
Sbjct: 12 GRPAR-VTSNSYANGSNQNCGNVISDIPSTRVAAPPGGKSSICLGWDDRPAARPAGRPPAE--DASRAQARPAGEALRRDHRSPEDLAYGTRP--RESSNSYASGNSQNTGNVLTGVPTTRVLRPPGGASEMSL 140
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: A0A7S0X2V9_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X2V9_9CHLO) HSP 1 Score: 87.8 bits (216), Expect = 1.450e-15 Identity = 54/131 (41.22%), Postives = 71/131 (54.20%), Query Frame = 1
Query: 73 SANAFAVGSNQNAGNFLTDKPTTRVRAPPGGASTFSISGNSEPEATPRQRFPNQKPE---VNAAAXXXXXXXXAANGYVPVAVAANAQPVQRTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICLG 456
S+NA+A GS+ N GN +TD+ TTR+ APPGG S + P R Q+ + +N + VP A A S+NAFA GS+QN GNF+TD+PTTR+HAPPGG + I G
Sbjct: 41 SSNAYANGSDPNCGNVITDRSTTRLHAPPGGHSQICFGADPRDAPQPVARVSTQEHQDYRMNTVSNVTSQVFG-----VPSAAHA-------ASSNAFANGSDQNNGNFITDRPTTRLHAPPGGHSQISFG 159
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: E1Z6N5_CHLVA (SAP domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z6N5_CHLVA) HSP 1 Score: 81.6 bits (200), Expect = 8.630e-15 Identity = 53/132 (40.15%), Postives = 73/132 (55.30%), Query Frame = 1
Query: 70 VSANAFAVGSNQNAGNFLTDKPTTRVRAPPGGASTFSISGN--SEP-EATPRQRFPNQKPEVNAAAXXXXXXXXAANGYVPVAVAANAQPVQRTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICLG 456
V+ N ++ QN GNF+TD+P++RV APPGGA+ +S +G+ ++P A P Q P AAA + + A AQ N +A S QN GNF+TDKP++RV APPGG +SI G
Sbjct: 69 VNNNNYSRNEGQNVGNFITDRPSSRVLAPPGGATNWSFAGDVPADPIRAKPAHSPIKQAPMSAAAAEAPGVAEAVSEDLIGAANMGVAQ-------NNYARPSGQNVGNFITDKPSSRVLAPPGGGSSIVFG 193
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: A0A2P6VF38_9CHLO (Cortical microtubule associated SPIRAL1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VF38_9CHLO) HSP 1 Score: 80.9 bits (198), Expect = 2.140e-14 Identity = 52/138 (37.68%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 70 VSANAFAVGSNQNAGNFLTDKPTTRVRAPPGGASTFSISGNSEPE-ATPR-QRFPNQKPEVNAAAXXXXXXXXAANGYVPVAVAANAQPV-------QRTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICLG 456
++ N ++ QN GNF+TD+P++RV APPGG ++++SG+ E A PR +++ P+V+ +A PVA A A + T N ++ QN GNFLTDKP++RV APPGG +SI G
Sbjct: 80 INDNNYSRSEGQNVGNFITDRPSSRVLAPPGGTMSWNMSGDMPAEPAKPRGKQYGYAPPQVSVSAHA-----------APVAAATAATDFDSDAVRGEPTHNNNYSRAQGQNVGNFLTDKPSSRVLAPPGGGSSIVFG 206
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Match: A0A812JVB4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JVB4_9DINO) HSP 1 Score: 81.3 bits (199), Expect = 2.160e-14 Identity = 49/128 (38.28%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 70 VSANAFAVGSNQNAGNFLTDKPTTRVRAPPGGASTFSISGNSEPEATPRQRFPNQKPEVNAAAXXXXXXXXAANGYVPVAVAANAQPVQRTSANAFATGSNQNAGNFLTDKPTTRVHAPPGGRTSICL 453
V++N++A GSNQN GN ++D P+TRV APPGG S+ + + P A R + A VP A R S+N++A+G++QN GN LT PTTRV PPGG + + L
Sbjct: 17 VTSNSYANGSNQNCGNVISDIPSTRVAAPPGGKSSICLGWDDRPVARAAGRPVEEASRAQAHRPPAGEAVRRDRRSVPEDQAQAYGTRPRESSNSYASGNSQNTGNVLTGVPTTRVSRPPGGASEMSL 144 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17554.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17554.1.1 >prot_P-wetherbeei_contig17554.1.1 ID=prot_P-wetherbeei_contig17554.1.1|Name=mRNA_P-wetherbeei_contig17554.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp MWVDVPEDAEPAPMEDGRPTTAVSANAFAVGSNQNAGNFLTDKPTTRVRAback to top mRNA from alignment at P-wetherbeei_contig17554:1..979+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17554.1.1 ID=mRNA_P-wetherbeei_contig17554.1.1|Name=mRNA_P-wetherbeei_contig17554.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=979bp|location=Sequence derived from alignment at P-wetherbeei_contig17554:1..979+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17554:1..979+ >mRNA_P-wetherbeei_contig17554.1.1 ID=mRNA_P-wetherbeei_contig17554.1.1|Name=mRNA_P-wetherbeei_contig17554.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig17554:1..979+ (Phaeothamnion wetherbeei SAG_119_79)back to top |