mRNA_P-wetherbeei_contig17342.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: D8LH94_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH94_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 3.690e-20 Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 2
Query: 56 LLLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKHVIFVMEDV 274
LLL P +TS +KALAC TGR++VN+PLGRI TNQE MDIVFD RFA+ GEE P+ F++VIFVMEDV
Sbjct: 297 LLLHGPPGTGKTSMIKALACHTGRNVVNVPLGRIKTNQELMDIVFDQRFAVVGEE-LPVTLGFENVIFVMEDV 368
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: A0A812US84_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812US84_SYMMI) HSP 1 Score: 82.8 bits (203), Expect = 1.070e-16 Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 2
Query: 56 LLLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKHVIFVMEDV 274
LLL P +TS +KA+A TGR++V+IPL RI TNQE MDIVFD FA+ GE D P+ FK +IFVMEDV
Sbjct: 252 LLLHGPPGTGKTSLIKAMAQHTGRNVVSIPLARIETNQELMDIVFDQSFAVKGE-DMPIKLSFKDIIFVMEDV 323
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: A0A6A3HZB0_9STRA (AAA domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HZB0_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 3.030e-16 Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 2
Query: 56 LLLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKHVIFVMEDV 274
LLL P +TS +KA+A +TGRHIVNIPLG++ TNQE MD +FD RFA+ G D P+ FK V+FVMED+
Sbjct: 309 LLLYGPPGTGKTSVIKAVAEKTGRHIVNIPLGKVKTNQELMDAMFDLRFAVDGL-DLPVRMGFKDVVFVMEDI 380
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: A0A7J7PYJ3_9CHLO (AAA domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PYJ3_9CHLO) HSP 1 Score: 81.3 bits (199), Expect = 5.760e-16 Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 2
Query: 59 LLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKHVIFVMEDV 274
LL P +TSF+KALAC T R IVNIPL RI TNQ+ MD++FD R + GE D +P PF IFVMEDV
Sbjct: 515 LLHGPPGTGKTSFIKALACHTRRSIVNIPLSRIKTNQQLMDMMFDQRVQVEGE-DMRVPLPFSKTIFVMEDV 585
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: A0A662WW18_9STRA (AAA domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW18_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 7.750e-16 Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 2
Query: 56 LLLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKHVIFVMEDV 274
LLL P +TS +KA+A +TGRHIVNIPLG++ TNQE MD +FD R+A+ G D P+ FK V+FVMED+
Sbjct: 347 LLLYGPPGTGKTSVIKAVAEKTGRHIVNIPLGKVKTNQELMDAMFDLRYAVDGL-DLPVRMGFKDVVFVMEDI 418
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: A0A662WF23_9STRA (AAA domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WF23_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 7.930e-16 Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 2
Query: 56 LLLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKHVIFVMEDV 274
LLL P +TS +KA+A +TGRHIVNIPLG++ TNQE MD +FD R+A+ G D P+ FK V+FVMED+
Sbjct: 349 LLLYGPPGTGKTSVIKAVAEKTGRHIVNIPLGKVKTNQELMDAMFDLRYAVDGL-DLPVRMGFKDVVFVMEDI 420
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: D7FQ72_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ72_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 1.970e-15 Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 2
Query: 59 LLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKH--VIFVMEDV 274
LL P +TS +KALACRTGRHI+ +PLGRI TN++ M+I+FD F +A +E +P P KH VI+V EDV
Sbjct: 309 LLHGPPGTGKTSLIKALACRTGRHIIQVPLGRIKTNEDLMNIMFDQSFRVATQE---LPVPLKHENVIYVFEDV 379
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: A0A0M0J9R9_9EUKA (Bcs1 aaa-type n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9R9_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 2.000e-15 Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 2
Query: 56 LLLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKHVIFVMEDV 274
LLL P +TS +KALA TGR IVN+PL RISTNQE MDI+FD ++ + G+E P+ FK VIFVMEDV
Sbjct: 281 LLLHGPPGTGKTSMIKALAQYTGRSIVNVPLARISTNQELMDIMFDQQYLVMGDEV-PIKLGFKDVIFVMEDV 352
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: D7FQ71_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ71_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 2.270e-15 Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 2
Query: 59 LLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKH--VIFVMEDV 274
LL P +TS +KALACRTGRHI+ +PLGRI TN++ M+++FD F +A +E +P P KH VI+V EDV
Sbjct: 97 LLHGPPGTGKTSLIKALACRTGRHIIQVPLGRIKTNEDLMNVMFDQSFRVATQE---LPVPLKHENVIYVFEDV 167
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Match: A0A813E3X4_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E3X4_POLGL) HSP 1 Score: 79.3 bits (194), Expect = 2.730e-15 Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 2
Query: 56 LLLQTRPPAPRTSFLKALACRTGRHIVNIPLGRISTNQEFMDIVFD*RFAIAGEEDWPMPCPFKHVIFVMEDV 274
LLL P +TS +KA+A TGR IVN+PL RI TNQE MDI+FD ++ + GEE P+ FK VIFVMEDV
Sbjct: 325 LLLHGPPGTGKTSLIKAMAQHTGRSIVNVPLARIGTNQELMDIMFDQQYMVEGEEV-PIKLGFKDVIFVMEDV 396 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17342.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17342.1.1 >prot_P-wetherbeei_contig17342.1.1 ID=prot_P-wetherbeei_contig17342.1.1|Name=mRNA_P-wetherbeei_contig17342.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=92bp CCALWTTLRRRAARMPSPATPTNSASCSTDVLPQSSGLPHRPPHRQHPTGback to top mRNA from alignment at P-wetherbeei_contig17342:333..848- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17342.1.1 ID=mRNA_P-wetherbeei_contig17342.1.1|Name=mRNA_P-wetherbeei_contig17342.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig17342:333..848- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17342:333..848- >mRNA_P-wetherbeei_contig17342.1.1 ID=mRNA_P-wetherbeei_contig17342.1.1|Name=mRNA_P-wetherbeei_contig17342.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig17342:333..848- (Phaeothamnion wetherbeei SAG_119_79)back to top |