mRNA_P-wetherbeei_contig1719.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: B8C108_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C108_THAPS) HSP 1 Score: 68.6 bits (166), Expect = 1.380e-11 Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 1
Query: 1 LPTVIGRLGNEIPGLLLNPIQLPRFAATLADPR---------KLVEALAAAREEANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPMA 261
LPTV+ ++G+ + L N Q + D R +L E A +EA N+F P L P YTVV +KDGYEIR+YDGY VA+T M+
Sbjct: 188 LPTVVPKIGSRVLNALTNQAQ-KNLSELQKDVRAGDPFRSITRLQEQTAEIAQEAKNVFLETPEGLAGPPYTVVSQKDGYEIREYDGYTVASTSMS 282
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: A0A7S2RC75_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RC75_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 6.620e-11 Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 4 PTVIGRLGNEIPGLLLNPI--QLPRFAATLADPRKLVEAL----AAAREEANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPMA 261
PT++ ++G+ I G N QL LADP ++ E L A EA NIF P L P Y VVE +GYE+R Y+GY+VA+T MA
Sbjct: 191 PTLVPKIGSSIFGAFSNQAKKQLELLQGDLADPTRIPERLSKQTADLATEARNIFLETPEGLAGPSYQVVEVCEGYEVRDYEGYSVASTSMA 282
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: A0A7S0FMK3_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMK3_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.770e-11 Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 1
Query: 1 LPTVIGRLGNEIPGLLLNPIQ--LPRFAATLADPRKLVEALA----AAREEANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPMA 261
LPT++ +LG+ I + N + L LADP ++ E L+ + +EA N+F P L P Y V+ K +GYEIR+Y+ YAVA+T MA
Sbjct: 113 LPTLVPKLGSRIFDAISNQARQNLELLQGDLADPSRIPERLSKQASSVAKEAKNVFLETPEGLEGPAYKVLSKGEGYEIREYEAYAVASTSMA 205
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: A0A7R9ZGF5_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGF5_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.240e-10 Identity = 36/93 (38.71%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 1 LPTVIGRLGNEIPGLLLNPIQ--LPRFAATLADPRKLVEAL----AAAREEANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPMA 261
LPT++ +LG+ + Q + LADP ++ E + A EA N+F P +L P YTVV + +GYEIR+YD Y VA+T MA
Sbjct: 198 LPTLVPKLGSRVFDAFSKQAQKQIELIQGDLADPSRIPERITKQAAEVAAEAKNVFSETPENLVGPEYTVVSRGEGYEIREYDEYDVASTSMA 290
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: A0A7S1ZQJ0_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZQJ0_TRICV) HSP 1 Score: 65.5 bits (158), Expect = 1.550e-10 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 1
Query: 1 LPTVIGRLGNEIPGLLLNPIQ--LPRFAATLADPRKLVEALAAARE----EANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPMA 261
LPT++ ++G+ I + + Q L + L+DP +L +A E EA N+F P +L P Y VVE+ +GYEIR+Y+GY VA+T MA
Sbjct: 106 LPTLVPKIGSRIIDAMSSQAQRNLDQLRDDLSDPSQLPRKVAKRVEDLSAEAKNVFLETPENLAGPTYKVVERGEGYEIREYEGYDVASTSMA 198
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: A0A6V2IWI0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IWI0_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 5.010e-10 Identity = 35/93 (37.63%), Postives = 52/93 (55.91%), Query Frame = 1
Query: 1 LPTVIGRLGNEIPGLLLNPIQ--LPRFAATLADPRKLVEAL----AAAREEANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPMA 261
LPT++ ++G+ I L Q L + +A+P ++ E + A EA N+F P L P+Y VV K GYE+R+YDGY VA+T M+
Sbjct: 48 LPTLVPKIGSRIFSALTKQTQKNLEQLRGDIANPSRIPERITKQTADLATEAKNVFLETPEGLAGPKYKVVGKGQGYELREYDGYTVASTSMS 140
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: A0A7S4RWL9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RWL9_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 5.860e-10 Identity = 35/93 (37.63%), Postives = 52/93 (55.91%), Query Frame = 1
Query: 1 LPTVIGRLGNEIPGLLLNPIQ--LPRFAATLADPRKLVEAL----AAAREEANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPMA 261
LPT++ ++G+ I L Q L + +A+P ++ E + A EA N+F P L P+Y VV K GYE+R+YDGY VA+T M+
Sbjct: 179 LPTLVPKIGSRIFSALTKQTQKNLEQLRGDIANPSRIPERITKQTADLATEAKNVFLETPEGLAGPKYKVVGKGQGYELREYDGYTVASTSMS 271
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: A0A7S1B3Z3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3Z3_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 7.940e-10 Identity = 34/93 (36.56%), Postives = 52/93 (55.91%), Query Frame = 1
Query: 1 LPTVIGRLGNEIPGLLLNPI--QLPRFAATLADPRKLVEALAAARE----EANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPMA 261
LP+++ ++G I ++ F +ADP ++ E L+A RE E N+F +P + SP+Y +VE YEIR+Y+GY A TPMA
Sbjct: 163 LPSLLPKVGQRIADAVVTQAIKNFEDFQGDIADPSRIPERLSAQREAIESEVRNVFSEVPENYSSPKYDLVETGLDYEIREYEGYFSAATPMA 255
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: A0A7S0DGY6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DGY6_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 3.350e-9 Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 88 ADPRKLVEALAAAREEANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPM 258
ADP KL +++ A+EEA N+F P L P Y+V+ + D YEIR+Y+ Y +A TPM
Sbjct: 112 ADPNKLKQSITDAQEEAKNVFRRTPTGLEMPTYSVLVQGDDYEIREYEPYTIAATPM 168
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Match: K0RJV0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJV0_THAOC) HSP 1 Score: 60.8 bits (146), Expect = 7.130e-9 Identity = 37/94 (39.36%), Postives = 48/94 (51.06%), Query Frame = 1
Query: 1 LPTVIGRLG----NEIPGLLLNPIQLPRFAATLADPRKLVEALAAAREE----ANNIFESMPADLYSPRYTVVEKKDGYEIRKYDGYAVATTPM 258
LPTV+ ++G N I N I+ + DP + +E + EE A NIF P L P Y VV +GYEIR+YDGY VA+T M
Sbjct: 180 LPTVVPKIGSRVFNAIANQAQNNIRNLQDDIQSGDPLRSIERIQKQTEEIQKEAKNIFSETPEGLVGPPYRVVSVAEGYEIREYDGYTVASTSM 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1719.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1719.1.1 >prot_P-wetherbeei_contig1719.1.1 ID=prot_P-wetherbeei_contig1719.1.1|Name=mRNA_P-wetherbeei_contig1719.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=87bp LPTVIGRLGNEIPGLLLNPIQLPRFAATLADPRKLVEALAAAREEANNIFback to top mRNA from alignment at P-wetherbeei_contig1719:202..462- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1719.1.1 ID=mRNA_P-wetherbeei_contig1719.1.1|Name=mRNA_P-wetherbeei_contig1719.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig1719:202..462- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1719:202..462- >mRNA_P-wetherbeei_contig1719.1.1 ID=mRNA_P-wetherbeei_contig1719.1.1|Name=mRNA_P-wetherbeei_contig1719.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig1719:202..462- (Phaeothamnion wetherbeei SAG_119_79)back to top |