mRNA_P-wetherbeei_contig1715.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A6H5KVS5_9PHAE (GUN4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS5_9PHAE) HSP 1 Score: 281 bits (719), Expect = 1.570e-90 Identity = 128/159 (80.50%), Postives = 146/159 (91.82%), Query Frame = 1
Query: 61 PAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETDWQ 537
P L S C IDYVPLATMLATGDLKGADQFTRDALI+AAG GS+KR FVY+++VK IP+TDL T+E LWL +SKGKFGYSVQ+D+W++TKGDFENFCRRIGW T +AEVERKLRWFGANEFIYDVD+APRGHLPLTSALRGTTLLKEL+MHP+WET+W+
Sbjct: 97 PTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWE 255
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A836C7C7_9STRA (GUN4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C7_9STRA) HSP 1 Score: 271 bits (694), Expect = 3.230e-87 Identity = 129/169 (76.33%), Postives = 148/169 (87.57%), Query Frame = 1
Query: 34 SSDVDE--LASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETDW 534
SSDV E + +P L+S IDYVPLATMLATGD KGADQFTRDALIRAAGEGS+KRGFVY++DVK IP+ DL TIE+LWLK+S GKFGYSVQ ++W+R KGDFENFCR IGWNTK+ E+ERKLRWFGANEFIYD ++AP+GHLPLTSALRGT LLKELL HP+WET+W
Sbjct: 54 SSDVAESKVDAPDNLSSDAGIDYVPLATMLATGDFKGADQFTRDALIRAAGEGSQKRGFVYWTDVKNIPNKDLATIEKLWLKYSGGKFGYSVQAEVWKRKKGDFENFCRTIGWNTKSEEIERKLRWFGANEFIYDAERAPKGHLPLTSALRGTQLLKELLNHPVWETEW 222
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A1Z5KQ11_FISSO (GUN4 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ11_FISSO) HSP 1 Score: 239 bits (611), Expect = 1.170e-74 Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 1
Query: 49 ELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWET-DWQ 537
E+ P L SAC +DYVPLATMLATGDL ADQFTRDALI +G ++ R FVYF+DVK IPSTDL T+ERLW K SKGKFGYSVQ+ W ++KGDFE FCR+IGW T + EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L+K LL HP+W+ DW+
Sbjct: 61 EIQIPTNLPSACGMDYVPLATMLATGDLVAADQFTRDALIEISGAKAKGRNFVYFTDVKNIPSTDLATMERLWNKFSKGKFGYSVQKKKWNQSKGDFEVFCRKIGWTTTDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKSLLKHPVWDNEDWK 224
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A4D9CXN1_9STRA (GUN4 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXN1_9STRA) HSP 1 Score: 231 bits (590), Expect = 2.870e-71 Identity = 114/177 (64.41%), Postives = 136/177 (76.84%), Query Frame = 1
Query: 10 SEAVAAPESSDVDELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIW-QRTKG-DFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETDW 534
SE+ AP S + L S C +DYVPLA ML GD KGADQFTRDALI+ AGE +RKRG+VYF++VK +P D+ TIE+LWLK+SKGKFGY+VQR IW Q T G DFE FCR+IGWNT +ERKL+WFG +EFIYD++KAP GHLPLTSALRGT+LLK LL +PLW T+W
Sbjct: 60 SESTDAPSSKNTAPTMEKDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWATEW 236
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A6S8ZHG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZHG1_9STRA) HSP 1 Score: 231 bits (588), Expect = 4.430e-71 Identity = 115/168 (68.45%), Postives = 131/168 (77.98%), Query Frame = 1
Query: 37 SDVDELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD-WQ 537
SD E P L S +DYVPLATMLATG L ADQFTRDALI AG ++ R FVYF++VK IPSTDL TIERLW K SKGKFGYSVQ+ +++ K DFE FCR+IGW TK+ EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L+KELL HP+W+ D WQ
Sbjct: 63 SDTAEEDIPTNLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWSKFSKGKFGYSVQKRKYRQAKNDFEAFCRKIGWTTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKELLNHPVWDNDDWQ 230
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A7S2MK00_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MK00_9STRA) HSP 1 Score: 230 bits (587), Expect = 5.880e-71 Identity = 116/168 (69.05%), Postives = 132/168 (78.57%), Query Frame = 1
Query: 31 ESSDVD-ELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD 531
E SDVD + A P L S +DYVPLATMLATG L ADQFTRDALI AG + R FVYF++VK IPSTDL TIERLW K S GKFGYSVQ+ W+++KGDF+ FCR+IGW TK+ EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L +ELL HP+WE D
Sbjct: 58 EPSDVDSDAAIPTVLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKEKGRDFVYFTEVKNIPSTDLATIERLWNKFSGGKFGYSVQKRKWKQSKGDFDLFCRKIGWLTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLCRELLSHPVWEND 225
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A7S2UF66_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF66_9STRA) HSP 1 Score: 230 bits (586), Expect = 8.050e-71 Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 1
Query: 22 AAPESSDVDELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD 531
A+ ++SDV E P L S +DYVPLATMLATG L ADQFTRDALI AG + R FVYF++VK +P+TDL T+ERLW K SKGKFGYSVQ+ W+++KGDFE FC +IGW TK+ +VERK RWFGA+EFIYDV KAP GHLPLTSALRGT+LLK++L HP+W+ D
Sbjct: 57 ASSQASDVAEEEIPTNLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVIAGSKEKGRDFVYFTEVKNMPATDLATMERLWNKFSKGKFGYSVQKKKWKQSKGDFEAFCSKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLLKQMLNHPVWDND 226
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: B8C9C4_THAPS (GUN4 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9C4_THAPS) HSP 1 Score: 224 bits (572), Expect = 7.190e-70 Identity = 106/151 (70.20%), Postives = 124/151 (82.12%), Query Frame = 1
Query: 70 LASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLW 522
L S +DYVPLATMLATG L ADQFTRDALI AG ++ R FVYF++VK IPSTDL TIERLW K S GKFGYSVQ+ IW+++KGDFE +C +IGW TK+ E+ERK RWFGA+EF YDV KAP+GHLPLTSALRGT+L+KELL HP+W
Sbjct: 1 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWTKFSGGKFGYSVQKQIWKKSKGDFEVWCNKIGWTTKDGEIERKKRWFGASEFTYDVKKAPKGHLPLTSALRGTSLIKELLNHPVW 151
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A7S0FNL4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNL4_9STRA) HSP 1 Score: 226 bits (575), Expect = 3.200e-69 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 1
Query: 22 AAPESSDVDELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD 531
AAP S V++ P L S +DYVPLATMLATG L ADQFTRDALI AG + R FVY+++VK IP+TDL TIERLW K S GKFGYSVQ+ IW+R+KGDFE +C++IGW T++ EVERK RWFGA+EF YDV KAP GHLPLTSALRGT+L+K+LL HP+WE D
Sbjct: 52 AAP-SETVEDAEIPTNLPSDVGMDYVPLATMLATGQLVEADQFTRDALIVLAGSKEKGRDFVYWTEVKEIPATDLATIERLWNKFSGGKFGYSVQKRIWKRSKGDFELWCKKIGWTTQDGEVERKKRWFGASEFTYDVKKAPEGHLPLTSALRGTSLIKQLLDHPVWEND 220
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A7S2R3S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3S6_9STRA) HSP 1 Score: 225 bits (574), Expect = 6.650e-69 Identity = 107/157 (68.15%), Postives = 125/157 (79.62%), Query Frame = 1
Query: 61 PAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD 531
P L S +DYVPLATMLATG L ADQFTRDALI+ G + R FVY+++VK IPSTDL TIERLW K S GKFGYSVQ+ W+++K DFE FCR+IGW TK+ +VERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L+K+LL HP+WE D
Sbjct: 78 PTNLPSDMGMDYVPLATMLATGQLAEADQFTRDALIKLCGATEKGRNFVYWTEVKLIPSTDLATIERLWNKFSGGKFGYSVQKKKWRQSKNDFEVFCRKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKQLLTHPVWEND 234 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1715.2.1 >prot_P-wetherbeei_contig1715.2.1 ID=prot_P-wetherbeei_contig1715.2.1|Name=mRNA_P-wetherbeei_contig1715.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp MLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERback to top mRNA from alignment at P-wetherbeei_contig1715:1331..3223+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1715.2.1 ID=mRNA_P-wetherbeei_contig1715.2.1|Name=mRNA_P-wetherbeei_contig1715.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1893bp|location=Sequence derived from alignment at P-wetherbeei_contig1715:1331..3223+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1715:1331..3223+ >mRNA_P-wetherbeei_contig1715.2.1 ID=mRNA_P-wetherbeei_contig1715.2.1|Name=mRNA_P-wetherbeei_contig1715.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig1715:1331..3223+ (Phaeothamnion wetherbeei SAG_119_79)back to top |