mRNA_P-wetherbeei_contig1715.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1715.2.1
Unique NamemRNA_P-wetherbeei_contig1715.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A6H5KVS5_9PHAE (GUN4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVS5_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 1.570e-90
Identity = 128/159 (80.50%), Postives = 146/159 (91.82%), Query Frame = 1
Query:   61 PAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETDWQ 537
            P  L S C IDYVPLATMLATGDLKGADQFTRDALI+AAG GS+KR FVY+++VK IP+TDL T+E LWL +SKGKFGYSVQ+D+W++TKGDFENFCRRIGW T +AEVERKLRWFGANEFIYDVD+APRGHLPLTSALRGTTLLKEL+MHP+WET+W+
Sbjct:   97 PTTLPSECGIDYVPLATMLATGDLKGADQFTRDALIKAAGAGSQKRDFVYWTEVKNIPNTDLATMENLWLSYSKGKFGYSVQKDLWRKTKGDFENFCRRIGWTTMDAEVERKLRWFGANEFIYDVDRAPRGHLPLTSALRGTTLLKELMMHPVWETEWE 255          
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A836C7C7_9STRA (GUN4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C7_9STRA)

HSP 1 Score: 271 bits (694), Expect = 3.230e-87
Identity = 129/169 (76.33%), Postives = 148/169 (87.57%), Query Frame = 1
Query:   34 SSDVDE--LASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETDW 534
            SSDV E  + +P  L+S   IDYVPLATMLATGD KGADQFTRDALIRAAGEGS+KRGFVY++DVK IP+ DL TIE+LWLK+S GKFGYSVQ ++W+R KGDFENFCR IGWNTK+ E+ERKLRWFGANEFIYD ++AP+GHLPLTSALRGT LLKELL HP+WET+W
Sbjct:   54 SSDVAESKVDAPDNLSSDAGIDYVPLATMLATGDFKGADQFTRDALIRAAGEGSQKRGFVYWTDVKNIPNKDLATIEKLWLKYSGGKFGYSVQAEVWKRKKGDFENFCRTIGWNTKSEEIERKLRWFGANEFIYDAERAPKGHLPLTSALRGTQLLKELLNHPVWETEW 222          
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A1Z5KQ11_FISSO (GUN4 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ11_FISSO)

HSP 1 Score: 239 bits (611), Expect = 1.170e-74
Identity = 114/164 (69.51%), Postives = 132/164 (80.49%), Query Frame = 1
Query:   49 ELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWET-DWQ 537
            E+  P  L SAC +DYVPLATMLATGDL  ADQFTRDALI  +G  ++ R FVYF+DVK IPSTDL T+ERLW K SKGKFGYSVQ+  W ++KGDFE FCR+IGW T + EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L+K LL HP+W+  DW+
Sbjct:   61 EIQIPTNLPSACGMDYVPLATMLATGDLVAADQFTRDALIEISGAKAKGRNFVYFTDVKNIPSTDLATMERLWNKFSKGKFGYSVQKKKWNQSKGDFEVFCRKIGWTTTDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKSLLKHPVWDNEDWK 224          
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A4D9CXN1_9STRA (GUN4 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXN1_9STRA)

HSP 1 Score: 231 bits (590), Expect = 2.870e-71
Identity = 114/177 (64.41%), Postives = 136/177 (76.84%), Query Frame = 1
Query:   10 SEAVAAPESSDVDELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIW-QRTKG-DFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETDW 534
            SE+  AP S +         L S C +DYVPLA ML  GD KGADQFTRDALI+ AGE +RKRG+VYF++VK +P  D+ TIE+LWLK+SKGKFGY+VQR IW Q T G DFE FCR+IGWNT    +ERKL+WFG +EFIYD++KAP GHLPLTSALRGT+LLK LL +PLW T+W
Sbjct:   60 SESTDAPSSKNTAPTMEKDVLKSECGMDYVPLANMLLIGDFKGADQFTRDALIQIAGENARKRGYVYFTEVKGLPEADMATIEKLWLKYSKGKFGYTVQRAIWNQVTVGKDFERFCRKIGWNTVENGIERKLKWFGKSEFIYDLEKAPVGHLPLTSALRGTSLLKNLLTYPLWATEW 236          
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A6S8ZHG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZHG1_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.430e-71
Identity = 115/168 (68.45%), Postives = 131/168 (77.98%), Query Frame = 1
Query:   37 SDVDELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD-WQ 537
            SD  E   P  L S   +DYVPLATMLATG L  ADQFTRDALI  AG  ++ R FVYF++VK IPSTDL TIERLW K SKGKFGYSVQ+  +++ K DFE FCR+IGW TK+ EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L+KELL HP+W+ D WQ
Sbjct:   63 SDTAEEDIPTNLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWSKFSKGKFGYSVQKRKYRQAKNDFEAFCRKIGWTTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKELLNHPVWDNDDWQ 230          
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A7S2MK00_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MK00_9STRA)

HSP 1 Score: 230 bits (587), Expect = 5.880e-71
Identity = 116/168 (69.05%), Postives = 132/168 (78.57%), Query Frame = 1
Query:   31 ESSDVD-ELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD 531
            E SDVD + A P  L S   +DYVPLATMLATG L  ADQFTRDALI  AG   + R FVYF++VK IPSTDL TIERLW K S GKFGYSVQ+  W+++KGDF+ FCR+IGW TK+ EVERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L +ELL HP+WE D
Sbjct:   58 EPSDVDSDAAIPTVLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKEKGRDFVYFTEVKNIPSTDLATIERLWNKFSGGKFGYSVQKRKWKQSKGDFDLFCRKIGWLTKDGEVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLCRELLSHPVWEND 225          
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A7S2UF66_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF66_9STRA)

HSP 1 Score: 230 bits (586), Expect = 8.050e-71
Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 1
Query:   22 AAPESSDVDELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD 531
            A+ ++SDV E   P  L S   +DYVPLATMLATG L  ADQFTRDALI  AG   + R FVYF++VK +P+TDL T+ERLW K SKGKFGYSVQ+  W+++KGDFE FC +IGW TK+ +VERK RWFGA+EFIYDV KAP GHLPLTSALRGT+LLK++L HP+W+ D
Sbjct:   57 ASSQASDVAEEEIPTNLPSDVGMDYVPLATMLATGQLAEADQFTRDALIVIAGSKEKGRDFVYFTEVKNMPATDLATMERLWNKFSKGKFGYSVQKKKWKQSKGDFEAFCSKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLLKQMLNHPVWDND 226          
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: B8C9C4_THAPS (GUN4 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9C4_THAPS)

HSP 1 Score: 224 bits (572), Expect = 7.190e-70
Identity = 106/151 (70.20%), Postives = 124/151 (82.12%), Query Frame = 1
Query:   70 LASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLW 522
            L S   +DYVPLATMLATG L  ADQFTRDALI  AG  ++ R FVYF++VK IPSTDL TIERLW K S GKFGYSVQ+ IW+++KGDFE +C +IGW TK+ E+ERK RWFGA+EF YDV KAP+GHLPLTSALRGT+L+KELL HP+W
Sbjct:    1 LPSDVGMDYVPLATMLATGQLAEADQFTRDALIVLAGSKAKGRDFVYFTEVKNIPSTDLATIERLWTKFSGGKFGYSVQKQIWKKSKGDFEVWCNKIGWTTKDGEIERKKRWFGASEFTYDVKKAPKGHLPLTSALRGTSLIKELLNHPVW 151          
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A7S0FNL4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNL4_9STRA)

HSP 1 Score: 226 bits (575), Expect = 3.200e-69
Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 1
Query:   22 AAPESSDVDELASPAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD 531
            AAP S  V++   P  L S   +DYVPLATMLATG L  ADQFTRDALI  AG   + R FVY+++VK IP+TDL TIERLW K S GKFGYSVQ+ IW+R+KGDFE +C++IGW T++ EVERK RWFGA+EF YDV KAP GHLPLTSALRGT+L+K+LL HP+WE D
Sbjct:   52 AAP-SETVEDAEIPTNLPSDVGMDYVPLATMLATGQLVEADQFTRDALIVLAGSKEKGRDFVYWTEVKEIPATDLATIERLWNKFSGGKFGYSVQKRIWKRSKGDFELWCKKIGWTTQDGEVERKKRWFGASEFTYDVKKAPEGHLPLTSALRGTSLIKQLLDHPVWEND 220          
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Match: A0A7S2R3S6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3S6_9STRA)

HSP 1 Score: 225 bits (574), Expect = 6.650e-69
Identity = 107/157 (68.15%), Postives = 125/157 (79.62%), Query Frame = 1
Query:   61 PAELASACSIDYVPLATMLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIERLWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFGANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETD 531
            P  L S   +DYVPLATMLATG L  ADQFTRDALI+  G   + R FVY+++VK IPSTDL TIERLW K S GKFGYSVQ+  W+++K DFE FCR+IGW TK+ +VERK RWFGA+EFIYDV KAP GHLPLTSALRGT+L+K+LL HP+WE D
Sbjct:   78 PTNLPSDMGMDYVPLATMLATGQLAEADQFTRDALIKLCGATEKGRNFVYWTEVKLIPSTDLATIERLWNKFSGGKFGYSVQKKKWRQSKNDFEVFCRKIGWTTKDGDVERKKRWFGASEFIYDVKKAPEGHLPLTSALRGTSLIKQLLTHPVWEND 234          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1715.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVS5_9PHAE1.570e-9080.50GUN4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836C7C7_9STRA3.230e-8776.33GUN4 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A1Z5KQ11_FISSO1.170e-7469.51GUN4 domain-containing protein n=2 Tax=Fistulifera... [more]
A0A4D9CXN1_9STRA2.870e-7164.41GUN4 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A6S8ZHG1_9STRA4.430e-7168.45Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2MK00_9STRA5.880e-7169.05Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2UF66_9STRA8.050e-7165.29Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8C9C4_THAPS7.190e-7070.20GUN4 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S0FNL4_9STRA3.200e-6965.88Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2R3S6_9STRA6.650e-6968.15Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1715contigP-wetherbeei_contig1715:1331..3223 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog35128.Thaps263658
PFAMsGUN4
Model size1102
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.4e-68
EggNOG OGs28PU6@1|root,2QWGS@2759|Eukaryota,2XCTR@2836|Bacillariophyta
Ec32 ortholog descriptiontetrapyrrole-binding protein
Ec32 orthologEc-08_001130.1
DescriptionGUN4-like
Cds size444
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186109.5457225-UTR-P-wetherbeei_contig1715:1330..14411683186109.5457225-UTR-P-wetherbeei_contig1715:1330..1441Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1715 1331..1441 +
1683186109.5766191-UTR-P-wetherbeei_contig1715:2676..32231683186109.5766191-UTR-P-wetherbeei_contig1715:2676..3223Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1715 2677..3223 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186109.5576699-CDS-P-wetherbeei_contig1715:1441..16911683186109.5576699-CDS-P-wetherbeei_contig1715:1441..1691Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1715 1442..1691 +
1683186109.5666602-CDS-P-wetherbeei_contig1715:2482..26761683186109.5666602-CDS-P-wetherbeei_contig1715:2482..2676Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1715 2483..2676 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1715.2.1prot_P-wetherbeei_contig1715.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1715 1442..2676 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1715.2.1

>prot_P-wetherbeei_contig1715.2.1 ID=prot_P-wetherbeei_contig1715.2.1|Name=mRNA_P-wetherbeei_contig1715.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
MLATGDLKGADQFTRDALIRAAGEGSRKRGFVYFSDVKRIPSTDLRTIER
LWLKHSKGKFGYSVQRDIWQRTKGDFENFCRRIGWNTKNAEVERKLRWFG
ANEFIYDVDKAPRGHLPLTSALRGTTLLKELLMHPLWETDWQATGDE*
back to top

mRNA from alignment at P-wetherbeei_contig1715:1331..3223+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1715.2.1 ID=mRNA_P-wetherbeei_contig1715.2.1|Name=mRNA_P-wetherbeei_contig1715.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1893bp|location=Sequence derived from alignment at P-wetherbeei_contig1715:1331..3223+ (Phaeothamnion wetherbeei SAG_119_79)
CTCAGGGCCAGTGAGGCGGTCGCCGCGCCGGAGTCCTCTGACGTGGACGA GCTCGCGTCCCCGGCAGAGCTTGCCTCCGCATGTTCTATAGACTACGTGC CCCTCGCCACGATGCTGGCGACGGGCGACCTGAAAGGGGCCGACCAGTTT ACGCGCGACGCGCTGATCCGCGCGGCCGGCGAGGGCAGTCGAAAACGCGG CTTCGTTTACTTTTCGGACGTCAAGCGCATTCCTTCGACGGACCTCCGGA CCATCGAGCGGCTATGGCTGAAGCACAGCAAGGGAAAGTTCGGGTACAGC GTGCAGCGCGACATCTGGCAGCGGACCAAGGGTGACTTTGAGAACTTTTG CCGGAGAATCGGTGAGCATAACTTCCTGTGTGGCGTTGTTGGGGCGTCTA TCGTGAGCGGCTTCAAAATAGAAATGGATGGGAAAGGATTCGCTTTCCAC CTTTATTTATAAAGAAGAGATCTTGGAGCTCAGCTGCGCCGGCTGCCGCG GTGGGGATAGGATCCCTGGGCCGTTCCTTCGTTACGCGGGTGCGTGGTGT TACCGCTGTGTTTTCATGGTGATTCTGCGCTGCCACCCTTGTCCAAAGCG GTTCTTCGTGGCCTTCTTTCTTATAGCTTCGCCGAGAGGAAACGTGGGCG TTGTTCTCCTTGAGACATTCGGTTGTGGCGCATTAGTTCCCTTCTGCGGT ATTATTGTGCCATTTATTACGAGATGTATGTCAGTGGTATGGGGATCTGC CACAGTCGTAAAATCAGCTTCCTTCTTCAATTGGTTTGTTTGGTATGTGA ATGAAAGCCAGATCCTCAAAAGGTTTTAAGGTTTTCCCCGTCGTTTCCCT ATTCCTTCTCTCTCCGGTTTCGCTGTCCCCGCCCCTCGCCGCTTCACCCT CGTTGCCACCGCTGTCCCCGCCCCTCGCCGCTTCACCCTCGTTGCCACCG CCGCCGCCGCCGCTGCCACCGGTGCTGCCGTCATCCCGGAAAATCAACAC ACTTCAACTGGAACGGCATCATGTACGGACTATGGCGGCTTCAACGCGAG TTCCTTTGCGTTCAACCGACGAAACTGAAAAACGGACCTGAAATCCCCCA AATGGGAAAAAAAAACGGAAAACGGAAAACTGCAATACGACCTGGTTTGC AGGGTGGAACACGAAGAACGCCGAGGTGGAGCGCAAGCTGAGGTGGTTCG GCGCCAACGAGTTCATCTATGACGTCGACAAGGCGCCGCGCGGCCACCTG CCGCTGACGAGCGCCCTCCGTGGCACGACTCTCCTCAAGGAGCTGCTGAT GCACCCGCTCTGGGAGACGGACTGGCAGGCGACGGGCGATGAATGAGTGG AAATGAAGCGACGCGACGAGCAGGTGGAAGCGGAGCGAGGCGGGGCAGGG CGGAGTGGAACCAGCGGAGCGCGACAGGAAGCGAAGTTGGAGCATATGGA AGTGGAGTGCCGAGGGAGCGAGCAGCCGGCGCGTCTGCGGCTGCAGCGCG TATGCGGCTGCGGCGCGACGGACGGAGCGGCGGCGGCGGCTGAGGAGCGA AGAAATCATGCAGGCGGGAGACGAAAAGGTGACGGAAGGCGGCTGGAACG CGATGGCGGCGGGAATACGATGGCAGCGGTTGCACCTGCGGTGGCGGCAG CATCGGCAGTGAGTGTAATCCGGCGTCGCAGTGGTTGCGGCTGCAACCGC CAGCCGATGCCGCAACAGCCGCGGCAGCGGTAGCCGCGGCAGCGGTGGCC GCGGCAGAGGCGACTGTGAAAGGCCATTTCACTTACCGTTCATTGGAGAT GTGATTTGGAGAAATGACGCCTTCGAAAGGCGGTAGGCGGCAGACGGCTC GGACGCCTCTCATGGCGGCACCTTACAGTGCCGTGGCTTCAGC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1715:1331..3223+

>mRNA_P-wetherbeei_contig1715.2.1 ID=mRNA_P-wetherbeei_contig1715.2.1|Name=mRNA_P-wetherbeei_contig1715.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig1715:1331..3223+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGCGACGGGCGACCTGAAAGGGGCCGACCAGTTTACGCGCGACGC
GCTGATCCGCGCGGCCGGCGAGGGCAGTCGAAAACGCGGCTTCGTTTACT
TTTCGGACGTCAAGCGCATTCCTTCGACGGACCTCCGGACCATCGAGCGG
CTATGGCTGAAGCACAGCAAGGGAAAGTTCGGGTACAGCGTGCAGCGCGA
CATCTGGCAGCGGACCAAGGGTGACTTTGAGAACTTTTGCCGGAGAATCG
GGTGGAACACGAAGAACGCCGAGGTGGAGCGCAAGCTGAGGTGGTTCGGC
GCCAACGAGTTCATCTATGACGTCGACAAGGCGCCGCGCGGCCACCTGCC
GCTGACGAGCGCCCTCCGTGGCACGACTCTCCTCAAGGAGCTGCTGATGC
ACCCGCTCTGGGAGACGGACTGGCAGGCGACGGGCGATGAATGA
back to top