mRNA_P-wetherbeei_contig17102.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17102.1.1 vs. uniprot
Match: D8LGF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF9_ECTSI) HSP 1 Score: 124 bits (312), Expect = 3.710e-31 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 13 YRITLANVASGSKILWAVVVFAYLFSWHALHLLRIEFRKFADLREDFLAYGDPDFLPQTRYSALVERVPAELRSNAALQAYFDRLFPGEVH 285
Y +TLANV SGS LW VVFAYLF+WHAL++LR E + FA++RE+FL GDPDF QTRY+ VE VPAELRS AL+AYF+ LFPG +H
Sbjct: 161 YYVTLANVPSGSNTLWVTVVFAYLFTWHALYVLRGEHQAFAEMREEFLTKGDPDFATQTRYTTKVENVPAELRSAVALEAYFEDLFPGCIH 251
BLAST of mRNA_P-wetherbeei_contig17102.1.1 vs. uniprot
Match: A0A835ZAA7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA7_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.170e-27 Identity = 52/94 (55.32%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 1 ATDFYRITLANVASGSKILWAVVVFAYLFSWHALHLLRIEFRKFADLREDFLAYGDPDFLPQTRYSALVERVPAELRSNAALQAYFDRLFPGEV 282
A FY++T+ NV +G +LWA VFAYL + H L++L E+ F+ LR+DFL YGDPD LPQ RYS +VE +P ELRS +L AYFD +FPG+V
Sbjct: 119 AEGFYQLTMINVPNGGTMLWASTVFAYLLTAHVLYMLNKEYLLFSRLRQDFLCYGDPDLLPQARYSIMVELLPEELRSGISLHAYFDAMFPGQV 212
BLAST of mRNA_P-wetherbeei_contig17102.1.1 vs. uniprot
Match: A0A6H5JF22_9PHAE (ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF22_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 3.430e-21 Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 1
Query: 13 YRITLANVASGSKILWAVVVFAYLFSWHALHLLRIEFRKFADLREDFLAYGDPDFLPQTRYSALVERVPAELRSNAALQAYFDRLFPGEVH 285
Y +TLANV SGS LW VVFAYLF+WHAL++LR E + FA++RE + Y L R++ VE VPAELRS AL+AYF+ LFPG +H
Sbjct: 163 YYLTLANVPSGSNTLWVTVVFAYLFTWHALYVLRGEHQAFAEMREARVPYQGGSGL---RHADPVENVPAELRSAVALEAYFEDLFPGCIH 250
BLAST of mRNA_P-wetherbeei_contig17102.1.1 vs. uniprot
Match: A0A8J2X3Y5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3Y5_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 4.420e-10 Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 22 TLANVASGSKILWAVVVFAYLFSWHALHLLRIEFRKFADLREDFLAYGD-PDFLPQTRYSALVERVPAELRSNAALQAYFDRLFPGEV 282
T+ V LWA V +L + H L+ + E F LR+ FL + + PQ YS +VERVP E R++AAL+AYF+ LFPGEV
Sbjct: 156 TVNVVVDNDWKLWAAVCAVWLVTLHTLYDVIQECEAFVKLRQQFLTKTEIMEDDPQATYSVMVERVPRECRADAALKAYFEHLFPGEV 243
BLAST of mRNA_P-wetherbeei_contig17102.1.1 vs. uniprot
Match: A0A7S0B2V3_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B2V3_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 1.300e-5 Identity = 32/101 (31.68%), Postives = 53/101 (52.48%), Query Frame = 1
Query: 4 TDFYRITLANVASGSKILWAVVVFAYLFSWHALHLLRIEFRKFADLREDFLAYGDP--------DFLPQTRYSALVERVPAELRSNAALQAYFDRLFPGEV 282
T ++ IT+ + + + L V +A + L L +E+ F +LREDFLA GDP + L Q R + +VE +PA R + + +++ LFP +V
Sbjct: 29 TGYFSITINKLENRNNKLVVVWFYAIAYYLVVLRRLWVEWVIFCELREDFLANGDPSAIKEDDAESLKQFRNTCIVENIPASHRRDKDIFIFYNTLFPNQV 129
BLAST of mRNA_P-wetherbeei_contig17102.1.1 vs. uniprot
Match: A0A4D9D4K0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4K0_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 4.600e-5 Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 1
Query: 67 VVFAYLFSWHALHLLRIEFRKFADLREDFLAYGDPDFLPQTRYSALVERVPAELRSNAALQAYFDRLFPGEV 282
V+ AY + L+LL +++++ LR F DP Y+ +V +P +RSN A+ AYFD LFPG V
Sbjct: 190 VLGAYYMTGVCLYLLWRQYQEYLSLRHAFRQRPDP-----ANYTIMVHHIPGSMRSNTAVSAYFDALFPGSV 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17102.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17102.1.1 >prot_P-wetherbeei_contig17102.1.1 ID=prot_P-wetherbeei_contig17102.1.1|Name=mRNA_P-wetherbeei_contig17102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp ATDFYRITLANVASGSKILWAVVVFAYLFSWHALHLLRIEFRKFADLREDback to top mRNA from alignment at P-wetherbeei_contig17102:311..831+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17102.1.1 ID=mRNA_P-wetherbeei_contig17102.1.1|Name=mRNA_P-wetherbeei_contig17102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=521bp|location=Sequence derived from alignment at P-wetherbeei_contig17102:311..831+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17102:311..831+ >mRNA_P-wetherbeei_contig17102.1.1 ID=mRNA_P-wetherbeei_contig17102.1.1|Name=mRNA_P-wetherbeei_contig17102.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig17102:311..831+ (Phaeothamnion wetherbeei SAG_119_79)back to top |