mRNA_P-wetherbeei_contig17032.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: A0A1G1HZJ7_9BACT (GH18 domain-containing protein n=1 Tax=Nitrospirae bacterium RBG_16_64_22 TaxID=1801708 RepID=A0A1G1HZJ7_9BACT) HSP 1 Score: 107 bits (267), Expect = 1.690e-24 Identity = 61/179 (34.08%), Postives = 93/179 (51.96%), Query Frame = 1
Query: 37 IVILVLIMVAGLGWAGHTYYARWRLEQPLPADIDRHQNAIWMGHKWFGKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWDHELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQETHKAI 573
IV+ + AG+ + R+++P P + NAIW+ H+WF + QA + L RLGF+ I+ HVGPL+ G IP +D + + L R PG R AW+GG GK +D A P+VR + C+ +L G FDGIH ++EP+ GD +F+ + +A+
Sbjct: 22 IVLNAAFLGAGIATIAYFLVDPVRVDRPAPPNPGT--NAIWIQHQWFTGEKDEKAAQALGENLQRLGFRYIFAHVGPLNEHGGIPPYDPDQARRFLDGVRRSAPGTRTLAWLGGKNKAWGGK----VDLADPQVRLAAQERCRDLLALG-FDGIHLNIEPVADGDADFLGFLETIREAV 193
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: A0A367FR66_9ACTN (Uncharacterized protein n=1 Tax=Sphaerisporangium album TaxID=509200 RepID=A0A367FR66_9ACTN) HSP 1 Score: 102 bits (253), Expect = 2.120e-22 Identity = 56/180 (31.11%), Postives = 89/180 (49.44%), Query Frame = 1
Query: 34 VIVILVLIMVAGLGWAGHTYYARWRLEQPLPADIDRHQNAIWMGHKWFGKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWDHELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQETHKAI 573
V+V+L+ + V L +G Y + L P P + R ++A W+GH W ++ A A L G D+Y H GP++ G +P + + R +PG+R AW+G P +D + + RA IV+T +V+ G FDG+HY+ EP+D GDL + + T A+
Sbjct: 36 VVVVLLSLPVLVLALSGIALYL-FSLGTPSPGAVTRGRDAAWLGHAWVDGRNGDPQVAALAAHLRGTGVSDLYVHTGPIEVDGTLPTSLYPRAGWAVGALRRALPGVRVHAWLGQRL------DPGMLDLSDAQTRANIVRTAGQVMAAG-FDGVHYNFEPLDSGDLGLLDVLDRTRAAL 207
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: UPI0019F02552 (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F02552) HSP 1 Score: 101 bits (252), Expect = 2.550e-22 Identity = 64/178 (35.96%), Postives = 91/178 (51.12%), Query Frame = 1
Query: 37 IVILVLIMVAGLGWAGHTYYA-RWRLEQPLPADIDRH--QNAIWMGHKWFGKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWDHELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQET 561
IV ++L+ AGLG A A W L + P + NAIW+ HKW G++ + A L R D+YFHVGPL +G IP + + R + P +R AW+G V + G P +D + RA IV+T + G FDGIHY++EPI+ GD + ++L ET
Sbjct: 5 IVRILLVFGAGLGVASLLLLAGAWMLYRYAPVSVPEPGGPNAIWVAHKWVGESHADDVYDRLAADLQRNRITDVYFHVGPLTGEGLIPLAKYPNAGTLIAAMRQRAPSIRLHAWIG--QVERRGGGP--LDLSDVGTRANIVRTAGDFIDLG-FDGIHYNIEPINSGDPDLLALLDET 177
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: A0A0G1DWP0_9BACT (GH18 domain-containing protein n=1 Tax=Candidatus Peregrinibacteria bacterium GW2011_GWF2_43_17 TaxID=1619068 RepID=A0A0G1DWP0_9BACT) HSP 1 Score: 100 bits (249), Expect = 5.570e-22 Identity = 55/176 (31.25%), Postives = 87/176 (49.43%), Query Frame = 1
Query: 46 LVLIMVAGLGWAGHTYYARWRLEQPLPADIDRHQNAIWMGHKWFGKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWDHELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQETHKAI 573
LV + V LGW Y+ D + +N IW+ H W G + + A +L + K IY H GP D G IP+ ++ + ++ + + P + AWVG V ++ E+RA IV+TC++++ E F G+HYD+EPI D F++L +ET +AI
Sbjct: 14 LVAVTVLILGW----YFVVGPHGDLEGKDFNTGENGIWIQHAWVGNEQDPQAVYDLALKLQKYDIKYIYIHTGPFDTDGTIPEERYKFAKEFVQFLKEKNPDLIPLAWVGQVR--------SELEIESEEIRANIVETCEKLIIETGFAGLHYDIEPIPHDDEYFLTLLEETREAI 177
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: A0A561UNH2_9ACTN (Glycosyl hydrolase family 18 (Putative chitinase) n=1 Tax=Kitasatospora viridis TaxID=281105 RepID=A0A561UNH2_9ACTN) HSP 1 Score: 97.8 bits (242), Expect = 7.220e-21 Identity = 61/179 (34.08%), Postives = 89/179 (49.72%), Query Frame = 1
Query: 31 AVIVILVLIMVAG-LGWAGHTYYARWRLEQPLPADIDRHQNAIWMGHKWF-GKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWDHELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQET 561
A +++L + AG L WAG P + R +A W+GH W G+ P + A QL R G +D+Y H GPL+ G +P + Q L ++PG+R AW+G V + PD + P VRA +V + ++VL G FDG+HYDLEP+ G ++ L T
Sbjct: 28 ATLLVLPPALAAGALWWAGQG--------DPAGSARTRGADAAWLGHAWVDGRKGPAD--LAALPQLVRGGVRDLYVHAGPLEHDGSLPADRYPAARQLLDAVHRELPGVRVQAWLGDVVAPEH---PDGMHLDDPAVRARVVASARQVLDAG-FDGVHYDLEPLQSGSAGYLDLLDAT 192
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: A0A5M3XUU5_9ACTN (Membrane protein n=3 Tax=Acrocarpospora TaxID=90974 RepID=A0A5M3XUU5_9ACTN) HSP 1 Score: 97.4 bits (241), Expect = 8.070e-21 Identity = 63/183 (34.43%), Postives = 96/183 (52.46%), Query Frame = 1
Query: 31 AVIVILVLIMVA--GLGWAGHTYYARWRLEQPLPADIDRHQNAIWMGHKWFGKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWDHELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQETHKAI 573
AV + LVLI+ A L +AG P P +A+W+GH W ++ A +L + KD+Y H GPLDA G +P + L ++A++PG+R AW+G TVN + ++ A RA +V + ++ G FDGIHYD EP+D GD ++++L +ET +AI
Sbjct: 15 AVPLTLVLIVAAMLRLDYAG----------TPAPWAKSTGNDALWLGHAWVDGRRTAADVNILASRLGSM--KDVYVHSGPLDANGTLPAAKYPNAANLLTWWKARLPGVRISAWLGQ-TVNPDDEGH--LNLADQATRARVVAGAKTLVDLG-FDGIHYDFEPVDDGDADYLALMRETRQAI 181
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: A0A4R7THF6_9ACTN (Uncharacterized protein n=2 Tax=Kribbella TaxID=182639 RepID=A0A4R7THF6_9ACTN) HSP 1 Score: 93.6 bits (231), Expect = 2.470e-19 Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 115 QPLPADIDRHQNAIWMGHKWFGKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWD---HELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQETH 564
+P R Q+A+W+GH W +I A A+QL G +D+Y H GPL+ G +P W L +P +R AW+G V + + D D A VR + + +VL EG FDGIH+DLEP+ G +F++L + H
Sbjct: 44 EPSSEARTRGQDALWLGHAWVDGRKTQADITALAKQLEGTGIRDLYVHTGPLEHDGSLPLATVAPKATWF--LDAVHRAMPNVRVQAWLGDVVLPQKNPGMDLDDAA---VRDRVTASSSQVLDEG-FDGIHFDLEPLQSGSESFLALLDQVH 190
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: A0A7Y0B3W2_9ACTN (Uncharacterized protein n=7 Tax=Streptomyces TaxID=1883 RepID=A0A7Y0B3W2_9ACTN) HSP 1 Score: 93.2 bits (230), Expect = 2.970e-19 Identity = 46/140 (32.86%), Postives = 72/140 (51.43%), Query Frame = 1
Query: 139 RHQNAIWMGHKWFGKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWDHELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQE 558
R ++A W+GH W +++ A++L G KD+Y H GPL+ G +P H +PG+R AW+G V N P + A P RA + + ++VL G FDG+H+DLEP+ GD +++ L +
Sbjct: 42 RGRDAYWIGHAWVDGRKKDADLKVLAERLKGTGIKDLYVHAGPLEHDGTLPAARHPRARWLTDGIHRVLPGIRVQAWLGDVLAND---GPVGLRLADPASRAAVTASARQVLDAG-FDGVHFDLEPLQSGDPDYLKLLDD 177
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: UPI0019B8FF9A (hypothetical protein n=1 Tax=Streptomyces omiyaensis TaxID=68247 RepID=UPI0019B8FF9A) HSP 1 Score: 90.9 bits (224), Expect = 2.370e-18 Identity = 44/143 (30.77%), Postives = 76/143 (53.15%), Query Frame = 1
Query: 139 RHQNAIWMGHKWFGKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWDHELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQETHK 567
R ++A W+GH W ++QA A++L G +D+Y H GPL+ G +P H +PG+R AW+G V ++ P+ + + R +V + ++VL G FDG+H+DLEP+ GD ++++L + +
Sbjct: 49 RGKDAYWIGHAWVDGRKKDADLQALAERLKGTGIRDLYVHAGPLEHDGTLPADRHPRARWLTDGVHRVLPGVRVQAWLGDVLADE---GPNGLWLSDAASRTAVVASARQVLGAG-FDGVHFDLEPLQSGDADYLTLLDDLRR 187
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Match: A0A4U3MKB6_9ACTN (Uncharacterized protein n=6 Tax=Herbidospora TaxID=28443 RepID=A0A4U3MKB6_9ACTN) HSP 1 Score: 89.4 bits (220), Expect = 8.000e-18 Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 1
Query: 109 LEQPLPADIDRHQNAIWMGHKWFGKTPPTEEIQATAQQLNRLGFKDIYFHVGPLDAKGEIPKWDHELWLQTLKQFRAQIPGMRAFAWVGGVTVNKFGKAPDTIDNALPEVRAGIVKTCQRVLKEGEFDGIHYDLEPIDRGDLNFISLCQETHKAI 573
L P PA +A+WMGH W ++++A +L + +D++ H GP A G + H L R +PG+R W+G TVN+ + +D+ P RA I+ + ++ G +DG+HY+ EP+ GD ++SL +ET +AI
Sbjct: 37 LGTPSPAARSAGTDALWMGHMWVDGRRTEKDLEALKPRLTHM--RDVFVHSGPYGADGRLDPNLHPKSRDFLAWARTHLPGVRVLPWLGQ-TVNEDDEGHLDLDD--PATRANIIAGAREIVALG-YDGVHYNFEPVLDGDAAYLSLLEETRRAI 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17032.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17032.1.1 >prot_P-wetherbeei_contig17032.1.1 ID=prot_P-wetherbeei_contig17032.1.1|Name=mRNA_P-wetherbeei_contig17032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=191bp RTRIREDVKRAVIVILVLIMVAGLGWAGHTYYARWRLEQPLPADIDRHQNback to top mRNA from alignment at P-wetherbeei_contig17032:10..582- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17032.1.1 ID=mRNA_P-wetherbeei_contig17032.1.1|Name=mRNA_P-wetherbeei_contig17032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig17032:10..582- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17032:10..582- >mRNA_P-wetherbeei_contig17032.1.1 ID=mRNA_P-wetherbeei_contig17032.1.1|Name=mRNA_P-wetherbeei_contig17032.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig17032:10..582- (Phaeothamnion wetherbeei SAG_119_79)back to top |