mRNA_P-wetherbeei_contig16988.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A7X9AEJ5_9BURK (NADH-quinone oxidoreductase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AEJ5_9BURK) HSP 1 Score: 159 bits (401), Expect = 5.820e-48 Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = 1
Query: 4 DFSTCTDHPPVTMDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDYMHPNVVTRPD 303
+FST D PP + ++Y ++S H+HRL +K+ LPR P IPTV+HLW NADWNEREIYDLFGVFF GH D RRLMMP+DWEGHPLRKDY HPN+ RPD
Sbjct: 55 EFSTAVDRPPDRLCVVYSLYSYTHRHRLMLKVDLPRYAPTIPTVSHLWENADWNEREIYDLFGVFFSGHEDLRRLMMPEDWEGHPLRKDYNHPNLTPRPD 154
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A7Z9UD75_9BACT (NADH-quinone oxidoreductase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UD75_9BACT) HSP 1 Score: 147 bits (370), Expect = 3.210e-43 Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 4 DFSTCTDHPPVTMDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDYMHPNVVTRPD 303
+F TC DHPP + + Y+ S H HR+ +KI+L R P +P++A L+ NADWNEREI+DLFGV F HPD RRLMMP+DW GHPLRKDY+HPNVV RPD
Sbjct: 57 EFETCADHPPDLLAFVCYLRSLGHGHRIALKINLDRNQPSLPSLADLYANADWNEREIFDLFGVIFHNHPDLRRLMMPEDWTGHPLRKDYLHPNVVKRPD 156
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A1V5PLZ6_9BACT (NADH-quinone oxidoreductase subunit C n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PLZ6_9BACT) HSP 1 Score: 124 bits (311), Expect = 3.800e-34 Identity = 49/94 (52.13%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 22 DHPPVTMDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDYMHPNVVTRPD 303
D+PP ++++Y++FS E +HRL +K LPREN +I +V LW+ A+W+EREI+DL GV F GH D RR+++P+D+ GHPL+KD+ HP V+ PD
Sbjct: 61 DYPPEKIELVYHLFSIEQRHRLCVKTELPRENSVINSVVSLWKAAEWHEREIFDLLGVKFEGHTDLRRILLPEDFTGHPLKKDFSHPEVIPSPD 154
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A3M1R126_9BACT (NADH-quinone oxidoreductase subunit C n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A3M1R126_9BACT) HSP 1 Score: 123 bits (309), Expect = 1.130e-33 Identity = 45/79 (56.96%), Postives = 66/79 (83.54%), Query Frame = 1
Query: 40 MDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDYM 276
+ ++Y++ S +H++ +K+ LPR+NP++P+VAH+WR ADW+ERE YDLFG+ F HPD RR+++PDDWEGHPLRKDY+
Sbjct: 67 LGVVYHLNSTVFRHKITLKVDLPRDNPVLPSVAHVWRTADWHEREAYDLFGIVFENHPDLRRILLPDDWEGHPLRKDYV 145
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A7V4HC89_9BACT (NADH-quinone oxidoreductase subunit C n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7V4HC89_9BACT) HSP 1 Score: 122 bits (306), Expect = 1.830e-33 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 1 FDFSTC---TDHPPVTMDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDY 273
FD+ C D+ + +Y ++S HKHR+ IKI + +NP IPTV+ +W A+W+ERE+YD+FG+ F+GHPD RR++MPDDWEGHPLRKDY
Sbjct: 53 FDYLMCLSGVDYGKGVLGTVYNIYSMTHKHRVNIKIEVNSDNPEIPTVSDIWPTANWHEREVYDMFGIKFIGHPDLRRILMPDDWEGHPLRKDY 146
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A7V0M1A0_9BACT (NADH-quinone oxidoreductase subunit C n=3 Tax=Bacteria TaxID=2 RepID=A0A7V0M1A0_9BACT) HSP 1 Score: 122 bits (305), Expect = 3.360e-33 Identity = 45/78 (57.69%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 49 IYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDYMHP 282
+Y+ +S +H H++ +K+ +PRENP IP++ LWR ADW+ERE+YDLFG+ F+ HPD RRL++P+DWEG+PLRKDY+ P
Sbjct: 70 VYHFYSMKHAHKIILKVEVPRENPAIPSICDLWRTADWHEREVYDLFGIVFLNHPDLRRLLLPEDWEGYPLRKDYVTP 147
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A2E0XGJ0_9BACT (NADH-quinone oxidoreductase subunit C n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A2E0XGJ0_9BACT) HSP 1 Score: 121 bits (304), Expect = 3.900e-33 Identity = 45/84 (53.57%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 37 TMDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDYMHPNV 288
TM+I+Y++FS H+H+L +K+ +P+ P +PTV H+W+ A+W+ERE+YDL+GV F GH D RR+++PDDWEG+P+RKDY P +
Sbjct: 70 TMEIVYHLFSMTHQHKLTLKVIVPKVEPHVPTVEHVWKVANWHEREVYDLYGVMFDGHSDLRRILLPDDWEGYPMRKDYKEPEI 153
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A1F6CA66_HANXR (NADH-quinone oxidoreductase subunit C n=1 Tax=Handelsmanbacteria sp. (strain RIFCSPLOWO2_12_FULL_64_10) TaxID=1817868 RepID=A0A1F6CA66_HANXR) HSP 1 Score: 120 bits (302), Expect = 7.200e-33 Identity = 46/84 (54.76%), Postives = 64/84 (76.19%), Query Frame = 1
Query: 22 DHPPVTMDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDY 273
D P + + Y+V+S H+HR+ +K+ +PRENP +PTV H+W+ A+W+ERE YD+ G+ F GH D RR++ PDDWEGHPLRKDY
Sbjct: 62 DDPSGDLVVAYHVYSMAHRHRIALKVFVPRENPAVPTVEHVWKIANWHEREAYDMMGIVFEGHSDLRRILCPDDWEGHPLRKDY 145
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A2H5W4L5_9BACT (NADH-quinone oxidoreductase n=1 Tax=bacterium HR11 TaxID=2035406 RepID=A0A2H5W4L5_9BACT) HSP 1 Score: 119 bits (299), Expect = 1.060e-32 Identity = 42/78 (53.85%), Postives = 66/78 (84.62%), Query Frame = 1
Query: 40 MDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDY 273
++++Y++FS H+HR+ +K+ +PR++P +PTV+ +WR A+W+ERE YDL G+ F GHPD RR+++P+DWEG+PLRKDY
Sbjct: 14 IEVVYHLFSFRHRHRIALKVRVPRDDPRVPTVSDIWRTAEWHEREAYDLLGIVFEGHPDLRRILLPEDWEGYPLRKDY 91
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Match: A0A419FBZ8_9BACT (NADH-quinone oxidoreductase subunit C n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A419FBZ8_9BACT) HSP 1 Score: 120 bits (300), Expect = 1.580e-32 Identity = 49/95 (51.58%), Postives = 69/95 (72.63%), Query Frame = 1
Query: 31 PVTMDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRNADWNEREIYDLFGVFFVGHPDQRRLMMPDDWEGHPLRKDYMHPNV-----VTRP 300
P +++++Y +FS +H H++ +K P+++P IPTV+ LW ADW+ERE YDL G+ F GHPD RR+++PDDWEGHPLRKDY P + VT P
Sbjct: 62 PDSLEVVYNLFSFKHLHKVTLKTRCPKDDPAIPTVSPLWPTADWHEREAYDLIGIQFTGHPDLRRILLPDDWEGHPLRKDYQAPALWHDIPVTNP 156 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16988.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16988.1.1 >prot_P-wetherbeei_contig16988.1.1 ID=prot_P-wetherbeei_contig16988.1.1|Name=mRNA_P-wetherbeei_contig16988.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=102bp FDFSTCTDHPPVTMDIIYYVFSNEHKHRLGIKIHLPRENPIIPTVAHLWRback to top mRNA from alignment at P-wetherbeei_contig16988:62..367+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16988.1.1 ID=mRNA_P-wetherbeei_contig16988.1.1|Name=mRNA_P-wetherbeei_contig16988.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=306bp|location=Sequence derived from alignment at P-wetherbeei_contig16988:62..367+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16988:62..367+ >mRNA_P-wetherbeei_contig16988.1.1 ID=mRNA_P-wetherbeei_contig16988.1.1|Name=mRNA_P-wetherbeei_contig16988.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=306bp|location=Sequence derived from alignment at P-wetherbeei_contig16988:62..367+ (Phaeothamnion wetherbeei SAG_119_79)back to top |