mRNA_P-wetherbeei_contig16887.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16887.1.1 vs. uniprot
Match: A0A6H5KTJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ5_9PHAE) HSP 1 Score: 210 bits (535), Expect = 4.210e-57 Identity = 119/267 (44.57%), Postives = 150/267 (56.18%), Query Frame = 1
Query: 511 HVEVSDCLLALGSDGDKERHG----GGFRRAGRWLGQGLRSGHLPDLSLEHVSLLPVGSLLEFGRFPTYYDCSRKKALVRAASVPPGARVLALSHPWESPGNPDPSGHQFEALRRFL--------------LGSKAVGGTRPR--FDYVWLLFSCASQNRIKPDFKLHLRNVVTAYCRADRVLVVPKLEVRPKDGTYFSDLTEYSTRGWCAAEFLCALRLSVPLT-----------------LSLRHGAAGSGGGNGGDVDDGNDLP 1200
+ EV+D L +G +ERH GF RAGRW+ G L +L+LE+V LLPV LL+ GRFP++YD SRKK LV A+ + P ++VL ++HPWESPGNPDPSG QF ALRRFL G A GG F YVWL FSC S NR++P F+ HL NV+TA+C D LV+P+ R +G ++D+ Y RGWC E LCAL L VP T LS G GGG G +++ N LP
Sbjct: 242 NTEVADYLREALPEGHRERHRCKRRRGFERAGRWMRLARAGGFLQNLALENVYLLPVSVLLDVGRFPSHYDASRKKQLVAASDISPQSQVLLVTHPWESPGNPDPSGKQFSALRRFLDEKATAGSADGGKGRGGSAEGGDSADEGFGYVWLSFSCTSSNRMRPAFQTHLDNVLTAWCFCDHALVLPETVTRAAEGFAYTDVEGYVERGWCCVELLCALHLEVPTTIHVALKDALSEAVTNCQLSSPQRRGGEGGGGGAEIEPDN-LP 507
BLAST of mRNA_P-wetherbeei_contig16887.1.1 vs. uniprot
Match: D7FGT9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT9_ECTSI) HSP 1 Score: 209 bits (532), Expect = 3.670e-56 Identity = 107/229 (46.72%), Postives = 143/229 (62.45%), Query Frame = 1
Query: 511 HVEVSDCLLALGSDGDKERHG----GGFRRAGRWLGQGLRSGHLPDLSLEHVSLLPVGSLLEFGRFPTYYDCSRKKALVRAASVPPGARVLALSHPWESPGNPDPSGHQFEALRRFLLGSKAVGGTRPR-----------------FDYVWLLFSCASQNRIKPDFKLHLRNVVTAYCRADRVLVVPKLEVRPKDGTYFSDLTEYSTRGWCAAEFLCALRLSVPLTLSL 1134
+ +V+D L +G +ERH GF RAGRW+ G L +L+LE+V LLPV LL+ GRFP++YD SR+K LV A+ + P ++VL ++HPWESPGNPDPSG QF ALRRFL G KA+GG+ F YVWL FSC S NR++P F+ HL NV+TA+C D LV+P+ R +G ++D+ Y RGWC + LCAL L VP+T+ +
Sbjct: 496 NTDVADYLREALPEGHRERHRCKRRRGFERAGRWMRLARAEGFLQNLALENVYLLPVSVLLDVGRFPSHYDASRRKQLVAASDISPQSQVLLVTHPWESPGNPDPSGKQFSALRRFLEG-KAMGGSTDGGEXXXXXXXXXDSADEGFGYVWLSFSCTSSNRMRPAFQTHLDNVLTAWCFCDHALVLPETVTRAAEGFTYTDVEGYVERGWCCVKLLCALHLDVPMTMHV 723
BLAST of mRNA_P-wetherbeei_contig16887.1.1 vs. uniprot
Match: A0A7S3XYW2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYW2_HETAK) HSP 1 Score: 102 bits (253), Expect = 1.830e-21 Identity = 72/192 (37.50%), Postives = 95/192 (49.48%), Query Frame = 1
Query: 574 GGFRRAGRWLGQGLRSGHLPDLSLEHVSLLPVGSLLEFGRFPTYYDCSRKKALVRAASV--PPGARVLALSHPWESPGNPDPSGHQFEALRRFLLGSKAVGGTRPRFDYVWLLFSCASQNRIKPDFKLHLRNVVTAYCRADRVLVVPKLE-VRPKDGTYFSDLTEYSTRGWCAAEFLCALRLSVPLTLSLRH 1140
GG RR GR Q + ++P+LSL+HV LLP G+L + GR + C KKAL A V ARVL +SH W+ G PD Q++ + RFL +G T ++W+ ++C Q L RNV TA AD LVVP+ E + T DL Y R WC AE + A P+ L H
Sbjct: 20 GGGRRDGRAFVQRAQQ-YVPELSLDHVHLLPAGALRQLGRLAKFELC--KKALRSARKVFRDRAARVLFVSHRWQGEGRPDEHNLQYDTILRFLDSRPDLGIT-----HIWIDYACLPQRHTSAGATLR-RNVATALFAADVFLVVPRFEDIATAPHT---DLAGYCARAWCQAELVVARARGAPVYLFCFH 199
BLAST of mRNA_P-wetherbeei_contig16887.1.1 vs. uniprot
Match: A0A7S4DDY8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDY8_HETAK) HSP 1 Score: 88.2 bits (217), Expect = 1.970e-16 Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 1
Query: 691 RFPTYYDCSRKKALVRAASVPPGARVLALSHPWESPGN---PDPSGHQFEALRRFLLGSKAVGGTRPRFDYVWLLFSCASQNRIKPD----FKLHLRNVVTAYCRADRVLVVPKLEVRPKDG--TYFSDLTEYSTRGWCAAEFLCALRLSVPLTLSLRHGA 1146
R P Y +C+ + V + +V +SH W+ N D + Q++ + +LLGS+ YVWL +C +Q+R +P+ F + L N+ TA + VLVVP+L+ + DG Y+SDL EY+ RGWC E L A+ + + ++L GA
Sbjct: 3 RMPLYEECAERGQHVPIEHLAATDKVAFISHRWQDAANNLADDAACSQYQVIMAYLLGSEEGQSVA----YVWLDLACINQDRSRPESLKEFYIKLDNIGTAIACSHTVLVVPRLKQQQVDGHCLYYSDLEEYTKRGWCLLEILSAIEMRCLIRVALVCGA 159
BLAST of mRNA_P-wetherbeei_contig16887.1.1 vs. uniprot
Match: A0A6V1VGB7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VGB7_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 2.140e-12 Identity = 56/179 (31.28%), Postives = 83/179 (46.37%), Query Frame = 1
Query: 634 DLSLEHVSLLPVGSLLEFGRFPTYYDCSRKKALVRAASVPPGARVLALSHPWESPGNP--------DPSGHQFEALRRFLLGSKAVGGTRPRFDYVWLLFSCASQNRIKPD----FKLHLRNVVTAYCRADRVLVVPKLEVRPKDGTYFSDLTEYSTRGWCAAEFLCALRLSVPLTLSL 1134
++ LE+V +L V L GR + C+ V ++ +VL +SH W+ D QF+ ++ FL + + +VWL SC +Q+R D F L L N+ TA + VLVVP+LE YFS+L EY+ RGWC E + A+ L + L L
Sbjct: 33 NMDLENVVVLTVQDFLASGRMVLFEKCAAGNQHVVIKNLGAQHKVLFVSHRWQVLSEDCSRAVKADDDVNVQFQVVKAFLESQEGR-----QITHVWLDLSCINQDRGTADGLKQFLLKLDNIGTAIACSHLVLVVPRLEQVEGQPLYFSNLQEYTERGWCLFEIVSAMMLQCRIVLGL 206
BLAST of mRNA_P-wetherbeei_contig16887.1.1 vs. uniprot
Match: A0A7S3YE75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YE75_HETAK) HSP 1 Score: 59.3 bits (142), Expect = 1.240e-6 Identity = 60/203 (29.56%), Postives = 83/203 (40.89%), Query Frame = 1
Query: 703 YYDCSRKKALVRAASVPPGARVLALSHPWESP-GN-PD-PSGHQFEALRRFLLGSKAVGGTRPRFDYVWLLFSCASQNRIKPD----FKLHLRNVVTAYCRADRVLVVPKLE--------VRPKDGT-----------------------YFSDLTEYSTRGWCAAEFLCALRLSVPLTLSLRHGAA--------GSGGGNGG 1173
Y + R+ V A ++ PGA +L +SH W+ GN PD P Q+ ++ FL S R +VW F C +Q R + F L N+ TA + +LVVP++E + K+G FSDL EY+ RGWC E + L + L L G A G G G GG
Sbjct: 3 YEEVERRGWHVPATALLPGAHLLFVSHRWQDAYGNQPDSPDRLQYRVVQTFLETSP----DGQRATHVWYDFGCINQERATTEGLTAFLQKLDNIPTAIFLSQTILVVPRIENASTWLAQKKAKEGEKKKKTKTMRASKLVNEEQARADGIFSDLYEYTARGWCLMESMTGLFGGSVIYLGLVAGGADDLTPTAGGRGAGAGG 201
BLAST of mRNA_P-wetherbeei_contig16887.1.1 vs. uniprot
Match: A0A0M0JGH7_9EUKA (Trafficking protein particle complex 8 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JGH7_9EUKA) HSP 1 Score: 56.6 bits (135), Expect = 5.030e-5 Identity = 28/72 (38.89%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 763 RVLALSHPWESPGNPDPSGHQFEALRRFLLGSKAVGGTRPRFDYVWLLFSCASQNRIKPD----FKLHLRNV 966
+VLA+SH W+ P PDP+G Q +A++R L + P+++Y+WL +SCA Q P F L L N+
Sbjct: 215 KVLAVSHRWDRPEEPDPTGAQMKAIKRMLRAN-------PQYEYMWLDYSCAPQGERTPQQQELFSLTLENM 279
BLAST of mRNA_P-wetherbeei_contig16887.1.1 vs. uniprot
Match: A0A0M0JLP8_9EUKA (Protein unc-45 homolog B n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLP8_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 8.490e-5 Identity = 41/121 (33.88%), Postives = 56/121 (46.28%), Query Frame = 1
Query: 766 VLALSHPWESPGNPDPSGHQFEALRRFLLGSKAVGGTRPRFDYVWLLFSCASQNRIKPD----FKLHLRNVVTAYCRADRVLVVPKLEVRPKDGTYFSDLTEYSTRGWCAAEFLCALRLSV 1116
VLA+SH WE P PD G QF A+R+++ G +P VW+ FSCA Q P FK LR V + RVL++ DLT Y TR W E +++++
Sbjct: 115 VLAVSHRWEQPAEPDTEGKQFAAIRKYVRG-------KPAIKLVWVDFSCAPQKERTPAEELVFKRTLRFVNLLFL-GSRVLIL-------------CDLT-YMTRFWTLLEAWISMQMTT 213 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16887.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16887.1.1 >prot_P-wetherbeei_contig16887.1.1 ID=prot_P-wetherbeei_contig16887.1.1|Name=mRNA_P-wetherbeei_contig16887.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=402bp AVEVCRQLLEEHNFAVDAPNGDGDTPLLLAAARGHVEVVEYLVELHDASPback to top mRNA from alignment at P-wetherbeei_contig16887:3..1300+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16887.1.1 ID=mRNA_P-wetherbeei_contig16887.1.1|Name=mRNA_P-wetherbeei_contig16887.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1298bp|location=Sequence derived from alignment at P-wetherbeei_contig16887:3..1300+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16887:3..1300+ >mRNA_P-wetherbeei_contig16887.1.1 ID=mRNA_P-wetherbeei_contig16887.1.1|Name=mRNA_P-wetherbeei_contig16887.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1206bp|location=Sequence derived from alignment at P-wetherbeei_contig16887:3..1300+ (Phaeothamnion wetherbeei SAG_119_79)back to top |