mRNA_P-wetherbeei_contig1680.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: A0A835Z0M6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M6_9STRA) HSP 1 Score: 268 bits (684), Expect = 9.060e-84 Identity = 132/234 (56.41%), Postives = 163/234 (69.66%), Query Frame = 3
Query: 366 STTACGGAANKKLYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYADFMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQRRHFTRIYVPWALRVGRRAAPLINIWYERQWDVPLEELRRTLRFEPAP 1067
S +A G + LY GH P++ QR L SAF+A ADP RADMVA LGETTG AL+++H M+ D G ELL RP L + S + L LP+GT G+AYADFMAH+ F+PD R VRFVDD+DLAYV+ RYRQVHD WHVL+GLPP++E E+ALK EMVQTGLPV A++AL G A + R + VPWA+R GRR+ PL+N+WYER WD+ L R L+FEPAP
Sbjct: 11 SKSAAGEPCKRILYKGHNPISPSQRVGLTFISAFSAFADPERADMVAALGETTGHRALKQMHHRMLQDPDGIELLRERPQLDEHSVDLEALGQLPSGTFGKAYADFMAHNQFTPDSRLPVRFVDDADLAYVMARYRQVHDLWHVLSGLPPSLEGEIALKWFEMVQTGLPVAAISALVGAARVPREGRAALRQKLVPWAIRAGRRSVPLMNVWYERYWDMYLSNFREKLKFEPAP 244
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: W7U2W9_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2W9_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.320e-80 Identity = 133/250 (53.20%), Postives = 168/250 (67.20%), Query Frame = 3
Query: 351 RLAALSTTACGGAANKK----------LYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYADFMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQRRHFTRIYVPWALRVGRRAAPLINIWYERQWDVPLEELRRTLRFEPAPP 1070
R+ STT+ + K+ LY H P + FQ+ ++AG SA TA DP R DMVA LGETTGT AL+RL R M D GRELL A+P + ++S DRLR LP GT GR YA F+ HHG+SPD R AVRFVDD++LA+V+ RYRQVHDFWHVL GLPPTV ELALK EMVQT LP+ A + + GP +LSA +R+ Y+PWA+R +A PL+ +WYER ++ PLE +R+ L+ APP
Sbjct: 57 RMRPFSTTSSQSSGGKETSPPAVPETPLYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPP 306
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: D7FK62_ECTSI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK62_ECTSI) HSP 1 Score: 249 bits (637), Expect = 2.340e-75 Identity = 130/258 (50.39%), Postives = 167/258 (64.73%), Query Frame = 3
Query: 366 STTACGGAANKKLYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYADFMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQ-----------------------RRHFTRIYVPWALRVGRRAA-PLINIWYERQWDVPLEELRRTLRFEPAP 1067
+TTA G AA + LY GH P + QR +AG + TA+ DP RADMVA LGE TG AL +L+R+M+ D GRE+L ARPV+ + + L +LP GTLG++Y++FM + FSPDGR V++VDD DLAYV+ RYR+VHD WH L GLP TVE ELALK E+VQTGLPV AL+A+ GP AL + + R R +VPWA+R GRRA PL+ +WYE++W+ PLE +RR L E AP
Sbjct: 78 NTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPAPTTTPSXXXSSGSGRKRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAP 335
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: A0A6T5QVX1_HETAK (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QVX1_HETAK) HSP 1 Score: 236 bits (603), Expect = 2.350e-71 Identity = 123/226 (54.42%), Postives = 149/226 (65.93%), Query Frame = 3
Query: 393 NKKLYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYADFMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQRRHFTRIYVPWALRV-GRRAAPLINIWYERQWDVPLEELRRTLRFEPAP 1067
N +LYP H P + FQ+ FLA SA A+ DP RADMVAVL ETTG ALR L M D G+++L +P+L + + + L SLP GT G AY FM +GFSP+GR VRFVDD++LAYVL RYRQVHD WH L GLPPTV ELALK +E++QTGLPV AL+A GP AL+ R R+Y+PWALR G APL+ + YE W PL +R L PAP
Sbjct: 29 NWRLYPTHQPTSTFQKGFLAVYSALVALNDPERADMVAVLSETTGEIALRNLRDVMKADPVGQQILLEKPILDETTVNLENLGSLPRGTFGHAYYTFMDGNGFSPEGRAPVRFVDDAELAYVLLRYRQVHDLWHALFGLPPTVGGELALKWLELLQTGLPVAALSAAAGPLALAPADRALLRRVYLPWALRAHGALRAPLMCVRYEALWGEPLAAVRARLGVLPAP 254
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: A0A067BMW8_SAPPC (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BMW8_SAPPC) HSP 1 Score: 234 bits (598), Expect = 1.010e-70 Identity = 124/255 (48.63%), Postives = 161/255 (63.14%), Query Frame = 3
Query: 306 AMRRCVRRVRVPLPARLAA-LSTTACGGAANKKLYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYADFMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQRRHFTRIYVPWALRVGRRAAPLINIWYERQWDVPLEELRRTLRFEPAP 1067
A RRC+ +V AR A+ L+ +A G L+ H P T Q+ +A T+A + A+P R DM+A LG+ TG ALR++H M D G E+L +P + D LRSLP + G AY FM HGF DGR VRFVDD++LAYVL RYR++HDFWHVL GLPPTV +E+ALK VE+VQTGLPV AL+ GP LS +R+ +VPWA R GR A L+N++YER+++ LE+LRR L AP
Sbjct: 2 APRRCLLQV----AARAASSLAPSAAGPPTRHVLHAHHVPTTPTQKLLVAATAAVSVFANPERGDMLAALGDATGEVALRQMHLKMCSDPVGMEILAQKPRIRSSVTDIDALRSLPTDSFGYAYTQFMDAHGFEADGRAHVRFVDDAELAYVLQRYRELHDFWHVLFGLPPTVFSEIALKYVELVQTGLPVCALSGFVGPLRLSCDERKELLGTFVPWAYRAGREAPCLLNVYYEREYETKLEDLRRRLNIRVAP 252
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: K3XAS5_GLOUD (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAS5_GLOUD) HSP 1 Score: 233 bits (593), Expect = 1.240e-69 Identity = 119/247 (48.18%), Postives = 158/247 (63.97%), Query Frame = 3
Query: 339 PLPARLAALST---TACGGAANKKLYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYADFMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQRRHFTRIYVPWALRVGRRAAPLINIWYERQWDVPLEELRRTLRFEPAPP 1070
PL A A S+ +A G + LY H P + Q+ FL+ SA + DP R DM+A+LGE TG +ALR++H M D G +LT RP + + LR+LP T G AY+ FM HGF DGR V++VDD +LAYV+ R+R++HDFWHVL GLPPTV E+ALK VE++QT LPV AL+ GP L++ +RR R Y+PWA R GR A L+++ YE +++ PLEELR+ LR E APP
Sbjct: 29 PLSAAAATASSPLGSAAGEPQKRVLYDTHMPTSPVQKVFLSVFSALSVFTDPERGDMLALLGEVTGRDALRQVHAKMCSDPVGVRILTERPSIRSDQIDMTYLRALPKHTFGYAYSQFMDSHGFEADGRAYVKYVDDEELAYVMKRHRELHDFWHVLFGLPPTVFGEIALKYVELLQTKLPVCALSGFVGPLRLTSEERRVLVRDYIPWANRAGRNAHFLLSVMYEEEFETPLEELRQRLRIEVAPP 275
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: A0A1V9YRS5_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRS5_9STRA) HSP 1 Score: 230 bits (586), Expect = 6.030e-69 Identity = 121/253 (47.83%), Postives = 159/253 (62.85%), Query Frame = 3
Query: 312 RRCVRRVRVPLPARLAALSTTACGGAANKKLYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYADFMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQRRHFTRIYVPWALRVGRRAAPLINIWYERQWDVPLEELRRTLRFEPAPP 1070
RR V RV L + ++ +A G L+ H P T Q+ +A T+A + +A+P R DM+A LG+ TG ALR++H M D G E+L +P + D LRSLP + G AY FM HGF DGR VRFVDD +LAYVL RYR++HDFWHVL GLPPTV ELALK VE+VQTGLPV AL+ + GP LS +R+ Y+PWA + G++A L+N++YER+++ LE+LR LR APP
Sbjct: 5 RRSVLRV---LARSASTVAPSAAGPPTQHLLHAHHVPTTPLQKILVAATAAVSVMANPERGDMLAALGDATGEVALRQMHLKMCSDPTGMEILAQKPRIRSTVTDVDALRSLPKDSFGYAYTQFMDAHGFEADGRAHVRFVDDPELAYVLQRYRELHDFWHVLFGLPPTVFGELALKYVELVQTGLPVAALSGIVGPLRLSCDERKELFTTYLPWAHQAGKQAPFLMNVYYEREYESNLEDLRARLRILVAPP 254
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: A0A8K1FEZ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEZ4_PYTOL) HSP 1 Score: 228 bits (580), Expect = 9.120e-68 Identity = 109/230 (47.39%), Postives = 145/230 (63.04%), Query Frame = 3
Query: 381 GGAANKKLYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYADFMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQRRHFTRIYVPWALRVGRRAAPLINIWYERQWDVPLEELRRTLRFEPAPP 1070
G + LY H P + Q+ L+ SAFT A+P R DM+A LGE TG EAL+R+H M D G +L +P + + FD LR+LP T G AY+ FM HGF DGR V+++DD +LAYV+ RYR++HDFWH L GLPPTV E+ LK VE+VQTGLP AL+ GP L + +R+ Y+PWA G +A L+N++YE++++ PLEELR L P PP
Sbjct: 48 GEPCKRVLYDTHMPTSPTQKILLSFVSAFTVFANPERGDMLATLGEVTGREALQRVHARMCSDPVGTRILVEQPTIRSDQIDFDYLRNLPKDTFGYAYSQFMDAHGFEADGRAYVKYIDDPELAYVMQRYRELHDFWHTLFGLPPTVFGEIILKYVELVQTGLPHCALSGFVGPLRLESAERKRLVTEYIPWANEAGHQAKFLMNVYYEKEFETPLEELRTRLNILPPPP 277
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: A0A485K2E7_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K2E7_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.320e-67 Identity = 117/239 (48.95%), Postives = 147/239 (61.51%), Query Frame = 3
Query: 357 AALSTTACGGAANKK-LYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYADFMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQRRHFTRIYVPWALRVGRRAAPLINIWYERQWDVPLEELRRTLRFEPAPP 1070
AALSTT+ G K LY H P + Q+ +A SAFT DP R DM+A LG+ TG ALR++H M D GR++L +P D LR LP T G AY FM HGF DGR V+FVDD +LAYV+ RYR++HDFWHVL GLPPT AE+ LK VE+VQTGLPV L+ GP L++ QRR Y+PWA R G+ A L+N++YE+++ PL +LR L PP
Sbjct: 26 AALSTTSAAGLPTKHVLYKAHVPTSPLQKIAVAVGSAFTVFTDPERGDMLAALGDVTGAVALRQMHLKMYSDPVGRQILAEKPRFRSHLVDIDALRLLPTDTFGFAYTQFMDAHGFEADGRADVKFVDDPELAYVMQRYRELHDFWHVLYGLPPTEFAEIILKFVELVQTGLPVCTLSGFVGPLRLTSGQRRQLLCTYIPWAHRAGKHAPFLMNVYYEKEFHTPLADLRARLGILLPPP 264
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Match: A0A0L0T2B7_ALLM3 (Ubiquinone biosynthesis protein COQ4, mitochondrial n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T2B7_ALLM3) HSP 1 Score: 225 bits (574), Expect = 1.460e-67 Identity = 114/224 (50.89%), Postives = 143/224 (63.84%), Query Frame = 3
Query: 399 KLYPGHYPMTVFQRAFLAGTSAFTAIADPTRADMVAVLGETTGTEALRRLHRTMVLDAGGRELLTARPVLTKESAGFDRLRSLPAGTLGRAYAD-FMAHHGFSPDGRCAVRFVDDSDLAYVLTRYRQVHDFWHVLAGLPPTVEAELALKVVEMVQTGLPVTALAALCGPAALSAIQRRHFTRIYVPWALRVGRRAAPLINIWYERQWDVPLEELRRTLRFEPAP 1067
KLYP H P ++F++ L A+ DP RADMVA +GETTG AL RL M+ + GR +L RP++T E+ RL +LP TLG AY FM HG+ P+ R V F+DD++LAYV+ RYRQVHD WH + GLPPTVE ELALK E QTGLP+TAL A GP LS +R Y+PWA+ G RA PL+N++YE + LE LR+ LR PAP
Sbjct: 2 KLYPTHIPTSLFEKVLLTVGGGLKALHDPLRADMVAAVGETTGRAALVRLRDQMLRSSTGRRILRERPIITSETFPPFRLEALPESTLGGAYYHGFMQKHGYVPESRVPVHFIDDAELAYVMLRYRQVHDLWHAMTGLPPTVEGELALKAFEYAQTGLPMTALGAALGPVLLSHNERARLVSTYLPWAVMAGTRAKPLMNVYYEEVLEEDLEALRQELRVTPAP 225 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1680.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1680.2.1 >prot_P-wetherbeei_contig1680.2.1 ID=prot_P-wetherbeei_contig1680.2.1|Name=mRNA_P-wetherbeei_contig1680.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp MRRCVRRVRVPLPARLAALSTTACGGAANKKLYPGHYPMTVFQRAFLAGTback to top mRNA from alignment at P-wetherbeei_contig1680:4613..6083+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1680.2.1 ID=mRNA_P-wetherbeei_contig1680.2.1|Name=mRNA_P-wetherbeei_contig1680.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1471bp|location=Sequence derived from alignment at P-wetherbeei_contig1680:4613..6083+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1680:4613..6083+ >mRNA_P-wetherbeei_contig1680.2.1 ID=mRNA_P-wetherbeei_contig1680.2.1|Name=mRNA_P-wetherbeei_contig1680.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig1680:4613..6083+ (Phaeothamnion wetherbeei SAG_119_79)back to top |