mRNA_P-wetherbeei_contig16619.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: A0A7X5WLZ8_9ACTN (Cupin domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WLZ8_9ACTN) HSP 1 Score: 171 bits (432), Expect = 5.240e-51 Identity = 79/170 (46.47%), Postives = 109/170 (64.12%), Query Frame = 1
Query: 22 RRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPDSTPADTSLSDDEIASAANKLFPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGA 531
RRVVTGH+ GK++ ASDS V+ + + L G L LWG D+P ++PD+G P +FPP+GG RF F + PDST L + + + PG+ +H ++PGMH +AS D +++SGR VLELDDG EL GD VVQ+GT H W+NP+ EPC ++ AL+GA
Sbjct: 4 RRVVTGHDGDGKAVFASDSEVDPITIDLLPGFELLRLWGGDEPASFPDDGSHPPSPQYFPPLGGFRFGLFTVPPDSTGIPADLDVEAALAEMEERLPGMAAHMEPDNPGMHTTASVDFEFIVSGRVVLELDDGETKELGPGDTVVQNGTRHAWRNPFDEPCTMVVALIGA 173
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: A0A853BEJ0_9PSEU (Putative cupin superfamily protein n=1 Tax=Amycolatopsis endophytica TaxID=860233 RepID=A0A853BEJ0_9PSEU) HSP 1 Score: 169 bits (428), Expect = 1.930e-50 Identity = 87/174 (50.00%), Postives = 112/174 (64.37%), Query Frame = 1
Query: 10 MSTFRRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPDSTPADTSLSDDEIASAANKLFPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGA 531
M++ RR+VTGH+ G+S VA DS V PGL GV + LWGAD+P +YPD G E A FPP+GG RF+ F L P T S ++ ++ A + FPGLL + +++PGMHRS +TD+ VLSG VL LDDGS+ L AGD VVQ+GT H W N +EP +L LVGA
Sbjct: 1 MTSRRRIVTGHDHDGRSTVAGDSVVEPRTSPGLPGVEMRYLWGADEPQSYPDGGTEPAWRRHFPPLGGFRFVSFTLPPAGTGEPVS---EQASAHAREAFPGLLETYREDEPGMHRSDTTDLAIVLSGEVVLGLDDGSEHVLRAGDTVVQNGTAHSWTNRNTEPAEMLFVLVGA 171
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: A0A1G6DSF6_9HYPH (Cupin domain-containing protein n=1 Tax=Bauldia litoralis TaxID=665467 RepID=A0A1G6DSF6_9HYPH) HSP 1 Score: 163 bits (412), Expect = 5.980e-48 Identity = 73/171 (42.69%), Postives = 107/171 (62.57%), Query Frame = 1
Query: 19 FRRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPDSTPADTSLSDDEIASAANKLFPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGA 531
RRVVTG +P GK+++ASD+ + + + G ++WGAD P P +G + + +WFPP G R + + P STP L E A+ N+ PGLL H + + PGMHR+ + D++YV+SGRCV+EL+ G T+L GD+++Q+GT H W+ P+ EPC VL VGA
Sbjct: 6 IRRVVTGTSPDGKAMIASDTVLESDGIAMMPGAGFVSIWGADGPQTLPTSGEKPDYTTWFPPAAGYRVEQITIPPSSTPPTPDLDMAEAAAEMNRKLPGLLEHMDPKHPGMHRTDTIDVVYVMSGRCVVELEGGETTDLGPGDILIQNGTRHAWRVPYDEPCTVLSISVGA 176
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: A0A351EPC5_9ACTN (Cupin domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EPC5_9ACTN) HSP 1 Score: 162 bits (410), Expect = 1.240e-47 Identity = 77/171 (45.03%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 19 FRRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPDSTPADTSLSDDEIASAANKLFPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGA 531
RRVVTGHN +GK+I ASD + + + G LWG+D YPD+GG P +FP G RF F +APD+T L + + + PG+ H E+PGMH +++ D Y++SGRCVLELDDG+ EL AGD VVQSGT H W+NP+ EPC ++ L+ A
Sbjct: 3 IRRVVTGHNESGKAIFASDEVIEPTTLALVPGAEFFQLWGSDDRMRYPDDGGRPNAPMYFPGPQGFRFGVFTVAPDATVFTEDLDIEAALAEMEEKLPGMAGHMEPENPGMHTTSTIDYEYIVSGRCVLELDDGATKELAAGDTVVQSGTRHAWRNPYDEPCVLVAVLIAA 173
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: A0A524NM39_9DELT (Cupin domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524NM39_9DELT) HSP 1 Score: 150 bits (378), Expect = 8.360e-43 Identity = 70/174 (40.23%), Postives = 100/174 (57.47%), Query Frame = 1
Query: 22 RRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPDSTPADTSLSDDEIASAANKLFPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGAHLKK 543
RRVVTGH GK++ SD V+ + + L G LW +D P P +G A +FPP+GG R F + PD+T +++ + GL H ++PGMH + + D YV+SGRCVLELDDGS E+ GD +VQ+GT HRW+NP+ CR++ +VGA ++
Sbjct: 4 RRVVTGHAKDGKAVFVSDEDVDSIDLTTLPGSVYHRLWASDLPVRLPGDGSPPAMAKYFPPVGGFRVWMFTVPPDATRPPQGTRTEDVHAELEAKLTGLAEHLERDEPGMHTTDTVDFEYVISGRCVLELDDGSTAEVGPGDTIVQNGTRHRWRNPFDVTCRMIVFIVGAEREE 177
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: A0A6C0TZV1_9GAMM (Cupin domain-containing protein n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0TZV1_9GAMM) HSP 1 Score: 149 bits (376), Expect = 2.330e-42 Identity = 78/175 (44.57%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 22 RRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPDSTPADTSLSDDEIA--SAANKL---FPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGA 531
RRVVTGHN +S VASD+ + G VPG+ G + WGAD+ YPD+G E + ++P GG R +E + PD T A+T+L +D A +A +L PGL + + EDPGMHR+A+ DM+ ++ G+C+L LD+ + L GD+V+QSGT H W NP+ PCR L +GA
Sbjct: 13 RRVVTGHNAENRSCVASDTALFGEDVPGMPGNVVIRFWGADKEMVYPDSGDEPQYAGFYPNRGGFRCLECSIPPD-TVAETALVNDAGADETALGELETKMPGLATVMSGEDPGMHRTATVDMVLIVDGQCILRLDE-EEVALGVGDLVIQSGTRHAWGNPYDRPCRFLAVTIGA 185
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: K0UVZ3_MYCVA (Cupin n=2 Tax=Mycobacteriaceae TaxID=1762 RepID=K0UVZ3_MYCVA) HSP 1 Score: 147 bits (372), Expect = 8.810e-42 Identity = 76/174 (43.68%), Postives = 101/174 (58.05%), Query Frame = 1
Query: 19 FRRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPDSTPADT--SLSDDEIASAANKLFPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGAH 534
RRVVTGH+P+GKS+ SD V L G + LWG D+ +PD+G ++FPP+GG RF F L P ST L +E + A + PGLL++ + DPGMH + + D VL G +LELDDG++ L GD VVQ+GT HRW+NP P R+ +VGAH
Sbjct: 3 IRRVVTGHDPSGKSVFVSDEKVAPREPVLLPGSEFTLLWGGDEAPRFPDDGAMPNWHTYFPPVGGFRFSMFTLPPHSTATGEPEQLDAEEALADAEEKLPGLLAYMDPSDPGMHTTDTIDFEVVLEGTVILELDDGAEVTLRPGDTVVQNGTRHRWRNPGDTPARLALFVVGAH 176
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: UPI000A52006B (cupin domain-containing protein n=1 Tax=Mycolicibacterium malmesburyense TaxID=1566886 RepID=UPI000A52006B) HSP 1 Score: 145 bits (366), Expect = 5.780e-41 Identity = 73/171 (42.69%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 22 RRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPD-STPADTSLSDDEIASAANKLFPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGA 531
RRVVTGH+P+G+S+ SD V + + G LWG D+P +PD+G ++FPP+GG RF L P T A +L DE + + PG+L + + DPGMH + + D VL G VLELDDG++ L+ GD VVQ+GT HRWKNP P R+ + GA
Sbjct: 4 RRVVTGHDPSGRSVFVSDDDVAPIETMLMPGFENHLLWGGDEPCRFPDDGSMPRWHNYFPPVGGFRFAMLTLPPSHGTEAPDALDIDEAMAEMEEKLPGMLGYMDYTDPGMHTTDTADFEVVLEGTVVLELDDGAEVTLHPGDAVVQNGTRHRWKNPGDTPARMAVFICGA 174
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: A0A6N0DQU8_9HYPH (Cupin domain-containing protein n=1 Tax=Methyloligella sp. GL2 TaxID=2742204 RepID=A0A6N0DQU8_9HYPH) HSP 1 Score: 145 bits (365), Expect = 9.200e-41 Identity = 73/179 (40.78%), Postives = 98/179 (54.75%), Query Frame = 1
Query: 4 NSMSTFRRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPDSTPADTSLSDDEIASAANKLFPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGAHLK 540
N RRVVTG G SIVASD+ + VP + G +LWG+D P++G WFPP G RF +L PD T +S K PGLL+ + ++PGMH + + D++YV SG C +EL DGSKT L+AGD +VQ+G H W+NP PC ++ +GA K
Sbjct: 4 NPSRPIRRVVTGETADGASIVASDAEEPPIEVPLMPGAQFFSLWGSDAAPVLPNDGAAPDFTQWFPPETGFRFQVIVLPPDGTALKEKMSAAAAVVETQKRLPGLLAAMDPKNPGMHATDTIDLIYVASGACEMELADGSKTALSAGDAIVQNGARHAWRNPHEGPCTLINVSLGAARK 182
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Match: A0A2A5EGQ6_9BACT (Cupin n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2A5EGQ6_9BACT) HSP 1 Score: 144 bits (362), Expect = 1.890e-40 Identity = 73/174 (41.95%), Postives = 100/174 (57.47%), Query Frame = 1
Query: 19 FRRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYPDNGGETAHPSWFPPIGGVRFIEFILAPDSTPADTSLSDDEIASAANKLFPGLLSHFNDEDPGMHRSASTDMLYVLSGRCVLELDDGSKTELNAGDVVVQSGTMHRWKNPWSEPCRVLGALVGAHLK 540
RRVVTGH+ GKS++ SDS + G+++ G G LWG D +PDNG WFP GG RF +++ P +T +D S EI + L PG L HF ++PGMH + S D Y++SG +LELDD + ELN GD +VQ+GT HRW N P ++ +G+ K
Sbjct: 8 IRRVVTGHSEEGKSVIISDSIIEGISLGG--GKDFIQLWGKDSITVHPDNGLMEEKMDWFPEAGGHRFFVWVVPPKTTNSDGQKSKAEI----DALLPGFLGHFEQDNPGMHTTNSVDCTYLISGSIILELDDNKEVELNEGDSIVQNGTRHRWHNRGEIPAVLITTCIGSERK 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16619.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16619.1.1 >prot_P-wetherbeei_contig16619.1.1 ID=prot_P-wetherbeei_contig16619.1.1|Name=mRNA_P-wetherbeei_contig16619.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp MSTFRRVVTGHNPAGKSIVASDSTVNGVAVPGLAGVYLSTLWGADQPYNYback to top mRNA from alignment at P-wetherbeei_contig16619:589..1134+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16619.1.1 ID=mRNA_P-wetherbeei_contig16619.1.1|Name=mRNA_P-wetherbeei_contig16619.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig16619:589..1134+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16619:589..1134+ >mRNA_P-wetherbeei_contig16619.1.1 ID=mRNA_P-wetherbeei_contig16619.1.1|Name=mRNA_P-wetherbeei_contig16619.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig16619:589..1134+ (Phaeothamnion wetherbeei SAG_119_79)back to top |