mRNA_P-wetherbeei_contig1631.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A3C0TT41_9PROT (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TT41_9PROT) HSP 1 Score: 381 bits (978), Expect = 4.500e-130 Identity = 197/290 (67.93%), Postives = 227/290 (78.28%), Query Frame = 1
Query: 19 QISTNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALT 888
Q V +++ L PGLYLVATPIGNLGD+S R ++ LA CDV+ACE+ TARL QHYG+ PRI+Y+EHS P R IL RL +GQRVA+VSDAGTPL+SDPG+KLVREAI +G +VSA PGPSAPLMALILSGLPSDRFFFQGF PP+ AARR LL +AG+ A+LIF ES RRLPQCL DMA++LG+RPAAVARELTKL EEVRRD L ALRDHY AGPPKGEVV+VV PP + LD+ L +AL + LKEAVA+VAA GLPRKQVYARALALT
Sbjct: 14 QAVREESVSIARALKPGLYLVATPIGNLGDMSDRGVRILADCDVVACENRDMTARLFQHYGIGTPRISYNEHSGPGTRMAILARLREGQRVAMVSDAGTPLVSDPGYKLVREAIQEGHYVSAAPGPSAPLMALILSGLPSDRFFFQGFPPPRSAARRGLLGEIAGLNATLIFLESPRRLPQCLNDMAEVLGDRPAAVARELTKLHEEVRRDGLRALRDHYAGAGPPKGEVVVVVAPPQPETEGAEAGQDRLDSHLQQALEQFSLKEAVARVAADCGLPRKQVYARALALT 303
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A353LNG6_9PROT (Ribosomal RNA small subunit methyltransferase I n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LNG6_9PROT) HSP 1 Score: 338 bits (867), Expect = 2.830e-113 Identity = 183/294 (62.24%), Postives = 221/294 (75.17%), Query Frame = 1
Query: 28 TNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGA-----LDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALTGK 894
TN SK L PGLYLVATPIGNL DI+ RAL L ACDVI CED RATARLLQHY + P +YH+HS ++R+ I++RL G R+ALVSDAGTPLISDPG+KLVR A+A+G VSALPG AP+MAL LSGLP+DRFFF GFLPP+ +AR++ L LA + +LIFFES RRL LADMA++ G+RPAAVAREL+KLFEEV R +LP L + Y GPPKGE+VI++G ++S Q+ LD+RL LA+ RLKEAVA+V A TGLPRKQVYARALAL+G+
Sbjct: 17 TNPRDAASK-LPPGLYLVATPIGNLADITVRALDVLRACDVIMCEDRRATARLLQHYAITTPTQSYHDHSAASVRKGIIERLRDGARIALVSDAGTPLISDPGYKLVRMAVAEGLHVSALPGACAPVMALSLSGLPTDRFFFAGFLPPRQSARKAQLRQLAAVPGTLIFFESPRRLVGSLADMAEIFGDRPAAVARELSKLFEEVVRGSLPTLAERYAADGPPKGEIVILIGA----SEEVSQQQSEALASDLDSRLQTELAQYRLKEAVARVTADTGLPRKQVYARALALSGQ 305
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A843RLX1_9PROT (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RLX1_9PROT) HSP 1 Score: 333 bits (855), Expect = 3.560e-111 Identity = 181/284 (63.73%), Postives = 210/284 (73.94%), Query Frame = 1
Query: 34 RGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
+G L PGLYLVATPIGNLGDIS RAL L D IACED+R T +LL G+ P AYH+HS+P R +LQ +A+GQ +ALVSDAGTPL+SDPGFKLVREAIA+G V+ALPGPSAPL+AL+LSGLPSDRFFF GFLP K ARRS L L G+ ASLIFFE A+RL CL DMA +LG R AAVARELTKL EE+RR +L AL HY EAG P+GE+VIVVGPP + +A G + LD L AL L++A A VAA +GLPR+QVYARAL L
Sbjct: 35 KGAVPGAALPPGLYLVATPIGNLGDISRRALDVLRRADRIACEDTRVTRKLLSAEGIATPLSAYHDHSSPRDRRRLLQAVAEGQAIALVSDAGTPLVSDPGFKLVREAIAEGLPVTALPGPSAPLVALLLSGLPSDRFFFGGFLPAKSGARRSELQELRGLNASLIFFEGAQRLAACLKDMAAVLGAREAAVARELTKLHEELRRGSLDALAAHYEEAGAPRGEIVIVVGPPAAAEA---GADFDLDGALGAALRHASLRDAAATVAAASGLPRRQVYARALEL 315
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A5J6MRJ2_9PROT (Ribosomal RNA small subunit methyltransferase I n=2 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MRJ2_9PROT) HSP 1 Score: 330 bits (847), Expect = 4.760e-110 Identity = 175/277 (63.18%), Postives = 209/277 (75.45%), Query Frame = 1
Query: 61 APGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALTG 891
APGL+LVATPIGNLGDI+ RAL+ L D+I CED+R TA+LL YG+ + YHEH+ +R +LQRLA+G+ +ALVSDAGTPL+SDPG+KLVREAIA G V+ALPG SA L AL+LSGLP DRFFF GFLP K RR LAGLA I ++LIF+ESA RL + LADM L +RPAAVARELTKL EEVRR +L AL DHY +AGPPKGE+VIVVGPP++ +S E LD L +ALA LK+A VAA TG PR+++YARALAL G
Sbjct: 40 APGLHLVATPIGNLGDITQRALELLRTADLIVCEDTRVTAKLLARYGIATRMLPYHEHNAERMRPELLQRLAEGRAIALVSDAGTPLVSDPGYKLVREAIAAGHEVTALPGASASLTALLLSGLPPDRFFFAGFLPAKSGERRRDLAGLAAIPSTLIFYESANRLAESLADMRAALADRPAAVARELTKLHEEVRRGSLGALADHYAKAGPPKGEIVIVVGPPLAETTAVS--EADLDRALKQALAHMSLKDAATAVAAATGRPRREIYARALALAG 314
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: UPI001D04063A (16S rRNA (cytidine(1402)-2'-O)-methyltransferase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001D04063A) HSP 1 Score: 327 bits (839), Expect = 4.390e-109 Identity = 181/282 (64.18%), Postives = 206/282 (73.05%), Query Frame = 1
Query: 43 GVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGA-LDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
G LA GLYLVATPIGNLGDIS RAL+ L D IACED+R T +LL G+ YH+HS R +L +A G+ VALVSDAGTPL+SDPGFKLVREAIA+G V+ALPGPSAPL+AL+LSGLPSDRFFF GFLPPK AARR L GL ++ASLIFFE A R+ CLADMA +LG R AAVARELTKL EEVRR L L HY EAGPP+GE+VIVVGPP G A+ EG LD L +AL L++A A VAA +GLPR+QVYARAL L
Sbjct: 10 GTRARLAAGLYLVATPIGNLGDISRRALEVLRRADRIACEDTRVTRKLLSAEGIATAVTTYHDHSGARDRRRLLDGVAAGEAVALVSDAGTPLVSDPGFKLVREAIAEGLAVTALPGPSAPLVALLLSGLPSDRFFFGGFLPPKSAARREALQGLRDLDASLIFFEGASRVASCLADMAAVLGPREAAVARELTKLHEEVRRGPLAELAAHYGEAGPPRGEIVIVVGPPAKGAAE----EGFDLDAALTDALTHASLRDAAATVAAASGLPRRQVYARALQL 287
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A5J6N4N5_9PROT (Ribosomal RNA small subunit methyltransferase I n=2 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6N4N5_9PROT) HSP 1 Score: 327 bits (839), Expect = 1.420e-108 Identity = 174/277 (62.82%), Postives = 207/277 (74.73%), Query Frame = 1
Query: 61 APGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALTG 891
A GLYLVATPIGNLGDI+ RAL L D+I CED+R TA+LL Y + + YHEH+ +R +L+RLA+GQ +ALVSDAGTPL+SDPG+KLVR AI G V+ALPG SA L AL+LSGLP DRFFF GFLPP+ RR L +A I +SLIF+ESA RL + LADMA +LG+RPAAVARELTKL EEVRR TL AL HY +AGPPKGE+V+V GPP+ A +S + LD L +ALAR LK+AVA VAA TG PR++VYARALAL G
Sbjct: 58 AAGLYLVATPIGNLGDITERALTLLRGVDLIVCEDTRVTAKLLARYAIAARTLPYHEHNAERMRPELLRRLAEGQSIALVSDAGTPLVSDPGYKLVRAAIEAGHAVTALPGASASLTALLLSGLPPDRFFFAGFLPPRSGERRRELETMAAIPSSLIFYESANRLGESLADMAAVLGDRPAAVARELTKLHEEVRRGTLAALAAHYAQAGPPKGEIVVVAGPPLEEAASISAAD--LDATLRQALARMSLKDAVAAVAATTGRPRREVYARALALAG 332
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: K2J5N3_9PROT (Ribosomal RNA small subunit methyltransferase I n=2 Tax=Oceanibaculum indicum TaxID=526216 RepID=K2J5N3_9PROT) HSP 1 Score: 321 bits (823), Expect = 1.100e-106 Identity = 171/290 (58.97%), Postives = 209/290 (72.07%), Query Frame = 1
Query: 16 SQISTNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
S+ T+R + + L P LY+VATPIGNLGD++ RA LA+ D++ACED+R T +LL +GLK P IAY++H+ +R T+L + QG+ VALVSDAGTPLISDPG+KLVR+A G V+A PGPSA L AL+L+GLP+DRF F GFLPPK ARR+ L LA + A+L+F+ES RL LADMA +LG+RP AVARELTKLFEEVRRD L AL HY EAGPPKGE+VIVVG P +A LD L ALA ++A A VA +TGLPRKQVYARAL L
Sbjct: 2 SRSQTDRKITSAASLTPALYIVATPIGNLGDLTMRARDILASADLVACEDTRVTGKLLSAFGLKRPLIAYNDHNADKVRPTLLDAVRQGKAVALVSDAGTPLISDPGYKLVRDAAEAGLAVTAAPGPSALLAALVLAGLPTDRFLFAGFLPPKSGARRTALGELASVPATLVFYESGPRLAASLADMAAVLGDRPGAVARELTKLFEEVRRDPLSALAAHYAEAGPPKGEIVIVVGAPAEQEASAD----TLDAALRRALAGNSTRDAAALVAGETGLPRKQVYARALEL 287
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: UPI0004269381 (16S rRNA (cytidine(1402)-2'-O)-methyltransferase n=2 Tax=Salinarimonas TaxID=690086 RepID=UPI0004269381) HSP 1 Score: 321 bits (823), Expect = 1.700e-106 Identity = 164/279 (58.78%), Postives = 207/279 (74.19%), Query Frame = 1
Query: 49 SKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
++P+APGLY+VATPIGNL D+S RAL TLAA D + ED+R T LL HYG+ P ++YHEHS +RE +L R+ +GQ +ALVSDAGTPL+SDPG+KLV+EAIA+G V +PGPSA L AL++SGLPSDRFFF+GFLP K ARR+ L LAGI +L+ FES RLP+ LAD A +LG RPA +ARELTK+FE VRR TL L + EAGPPKGE+V+++G S ++ E LD L ALA +K+A A VAA+TGLP+++VYARAL L
Sbjct: 32 AEPIAPGLYVVATPIGNLADVSFRALATLAAADAVLAEDTRVTRHLLAHYGIATPLVSYHEHSGEGVRERMLARVREGQALALVSDAGTPLVSDPGYKLVQEAIAEGLTVVPIPGPSAILSALVVSGLPSDRFFFEGFLPAKSGARRARLEALAGIPGTLLLFESPHRLPEMLADAAAVLGPRPAVMARELTKMFETVRRGTLETLAQEFAEAGPPKGEIVVLIGE-ASSESRREEAESGLDAALARALASHSIKDAAALVAAETGLPKREVYARALVL 309
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A2W6YRW8_9HYPH (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Chelatococcus sp. TaxID=1953771 RepID=A0A2W6YRW8_9HYPH) HSP 1 Score: 320 bits (821), Expect = 2.530e-106 Identity = 168/280 (60.00%), Postives = 205/280 (73.21%), Query Frame = 1
Query: 49 SKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALT 888
++PLAPGL++VATPIGNL DIS RAL TLAA D + ED+R + LL HYG+ P YHEH+ +R +L +L +G ++AL+SDAGTPL+SDPGFKLV E +A+G V+ +PGPSA L AL+L+GLP+DRFFF+GFLPPK AARR+ L LA I SL+FFES RRL + L D A +LG RP AVARELTK E VRR TLP L HY E +GE+V+++GPP G L E ALD RL AL LKEAVAQVAAQTG+PR++VYARAL LT
Sbjct: 23 AEPLAPGLHIVATPIGNLRDISFRALATLAAADAVLAEDTRTSKTLLAHYGISTPLYPYHEHNAEQMRPKVLAKLREGGKLALISDAGTPLVSDPGFKLVAEVVAEGLPVTGVPGPSAVLAALVLAGLPTDRFFFEGFLPPKAAARRTRLTELAAIPGSLVFFESPRRLAEMLTDAAAVLGARPGAVARELTKFHETVRRGTLPELARHYGEQEEARGEIVVIIGPP--GAEALLPAEDALDERLKTALESLSLKEAVAQVAAQTGVPRRKVYARALELT 300
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: UPI00115E0C5A (16S rRNA (cytidine(1402)-2'-O)-methyltransferase n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115E0C5A) HSP 1 Score: 321 bits (822), Expect = 2.570e-106 Identity = 174/295 (58.98%), Postives = 214/295 (72.54%), Query Frame = 1
Query: 1 ENAIPSQISTNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
+ +P + +N G SKP A GLYLVATPIGN+ DI+ RAL LA D++ACED+R TA+LL GLK P AYH+H+ +L++L G VALVSDAGTPL+SDPGF+LVR + +G V++LPGPSAPL AL LSGLPSDRF F GFLP K +ARR++LA LAG+ A+LIFFES RL + L DMA +LG R AAVARELTKLFEEVRR LP L HY EAG PKGEVV+VVGPP G+A+ + E +D L +ALA +++A A VAA TG PR+++YARAL L
Sbjct: 20 DTTVPGEAQSNGGTAGSKPAA-GLYLVATPIGNIRDITLRALDVLAGADLVACEDTRVTAKLLGLLGLKAPLFAYHDHNADRAGPALLEKLRAGLAVALVSDAGTPLVSDPGFRLVRACVEEGIPVTSLPGPSAPLTALQLSGLPSDRFLFAGFLPNKSSARRTVLAELAGVPATLIFFESPHRLAESLEDMAAVLGGRDAAVARELTKLFEEVRRAPLPTLAAHYAEAGGPKGEVVVVVGPP--GEAEAASAED-VDALLRDALADASVRDAAATVAAATGRPRREIYARALEL 310 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1631.1.1 >prot_P-wetherbeei_contig1631.1.1 ID=prot_P-wetherbeei_contig1631.1.1|Name=mRNA_P-wetherbeei_contig1631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=300bp ENAIPSQISTNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVback to top mRNA from alignment at P-wetherbeei_contig1631:556..1455+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1631.1.1 ID=mRNA_P-wetherbeei_contig1631.1.1|Name=mRNA_P-wetherbeei_contig1631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=900bp|location=Sequence derived from alignment at P-wetherbeei_contig1631:556..1455+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1631:556..1455+ >mRNA_P-wetherbeei_contig1631.1.1 ID=mRNA_P-wetherbeei_contig1631.1.1|Name=mRNA_P-wetherbeei_contig1631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=900bp|location=Sequence derived from alignment at P-wetherbeei_contig1631:556..1455+ (Phaeothamnion wetherbeei SAG_119_79)back to top |