mRNA_P-wetherbeei_contig1631.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1631.1.1
Unique NamemRNA_P-wetherbeei_contig1631.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A3C0TT41_9PROT (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TT41_9PROT)

HSP 1 Score: 381 bits (978), Expect = 4.500e-130
Identity = 197/290 (67.93%), Postives = 227/290 (78.28%), Query Frame = 1
Query:   19 QISTNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALT 888
            Q      V +++ L PGLYLVATPIGNLGD+S R ++ LA CDV+ACE+   TARL QHYG+  PRI+Y+EHS P  R  IL RL +GQRVA+VSDAGTPL+SDPG+KLVREAI +G +VSA PGPSAPLMALILSGLPSDRFFFQGF PP+ AARR LL  +AG+ A+LIF ES RRLPQCL DMA++LG+RPAAVARELTKL EEVRRD L ALRDHY  AGPPKGEVV+VV PP          +  LD+ L +AL +  LKEAVA+VAA  GLPRKQVYARALALT
Sbjct:   14 QAVREESVSIARALKPGLYLVATPIGNLGDMSDRGVRILADCDVVACENRDMTARLFQHYGIGTPRISYNEHSGPGTRMAILARLREGQRVAMVSDAGTPLVSDPGYKLVREAIQEGHYVSAAPGPSAPLMALILSGLPSDRFFFQGFPPPRSAARRGLLGEIAGLNATLIFLESPRRLPQCLNDMAEVLGDRPAAVARELTKLHEEVRRDGLRALRDHYAGAGPPKGEVVVVVAPPQPETEGAEAGQDRLDSHLQQALEQFSLKEAVARVAADCGLPRKQVYARALALT 303          
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A353LNG6_9PROT (Ribosomal RNA small subunit methyltransferase I n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LNG6_9PROT)

HSP 1 Score: 338 bits (867), Expect = 2.830e-113
Identity = 183/294 (62.24%), Postives = 221/294 (75.17%), Query Frame = 1
Query:   28 TNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGA-----LDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALTGK 894
            TN     SK L PGLYLVATPIGNL DI+ RAL  L ACDVI CED RATARLLQHY +  P  +YH+HS  ++R+ I++RL  G R+ALVSDAGTPLISDPG+KLVR A+A+G  VSALPG  AP+MAL LSGLP+DRFFF GFLPP+ +AR++ L  LA +  +LIFFES RRL   LADMA++ G+RPAAVAREL+KLFEEV R +LP L + Y   GPPKGE+VI++G       ++S Q+       LD+RL   LA+ RLKEAVA+V A TGLPRKQVYARALAL+G+
Sbjct:   17 TNPRDAASK-LPPGLYLVATPIGNLADITVRALDVLRACDVIMCEDRRATARLLQHYAITTPTQSYHDHSAASVRKGIIERLRDGARIALVSDAGTPLISDPGYKLVRMAVAEGLHVSALPGACAPVMALSLSGLPTDRFFFAGFLPPRQSARKAQLRQLAAVPGTLIFFESPRRLVGSLADMAEIFGDRPAAVARELSKLFEEVVRGSLPTLAERYAADGPPKGEIVILIGA----SEEVSQQQSEALASDLDSRLQTELAQYRLKEAVARVTADTGLPRKQVYARALALSGQ 305          
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A843RLX1_9PROT (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RLX1_9PROT)

HSP 1 Score: 333 bits (855), Expect = 3.560e-111
Identity = 181/284 (63.73%), Postives = 210/284 (73.94%), Query Frame = 1
Query:   34 RGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
            +G      L PGLYLVATPIGNLGDIS RAL  L   D IACED+R T +LL   G+  P  AYH+HS+P  R  +LQ +A+GQ +ALVSDAGTPL+SDPGFKLVREAIA+G  V+ALPGPSAPL+AL+LSGLPSDRFFF GFLP K  ARRS L  L G+ ASLIFFE A+RL  CL DMA +LG R AAVARELTKL EE+RR +L AL  HY EAG P+GE+VIVVGPP + +A   G +  LD  L  AL    L++A A VAA +GLPR+QVYARAL L
Sbjct:   35 KGAVPGAALPPGLYLVATPIGNLGDISRRALDVLRRADRIACEDTRVTRKLLSAEGIATPLSAYHDHSSPRDRRRLLQAVAEGQAIALVSDAGTPLVSDPGFKLVREAIAEGLPVTALPGPSAPLVALLLSGLPSDRFFFGGFLPAKSGARRSELQELRGLNASLIFFEGAQRLAACLKDMAAVLGAREAAVARELTKLHEELRRGSLDALAAHYEEAGAPRGEIVIVVGPPAAAEA---GADFDLDGALGAALRHASLRDAAATVAAASGLPRRQVYARALEL 315          
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A5J6MRJ2_9PROT (Ribosomal RNA small subunit methyltransferase I n=2 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MRJ2_9PROT)

HSP 1 Score: 330 bits (847), Expect = 4.760e-110
Identity = 175/277 (63.18%), Postives = 209/277 (75.45%), Query Frame = 1
Query:   61 APGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALTG 891
            APGL+LVATPIGNLGDI+ RAL+ L   D+I CED+R TA+LL  YG+    + YHEH+   +R  +LQRLA+G+ +ALVSDAGTPL+SDPG+KLVREAIA G  V+ALPG SA L AL+LSGLP DRFFF GFLP K   RR  LAGLA I ++LIF+ESA RL + LADM   L +RPAAVARELTKL EEVRR +L AL DHY +AGPPKGE+VIVVGPP++    +S  E  LD  L +ALA   LK+A   VAA TG PR+++YARALAL G
Sbjct:   40 APGLHLVATPIGNLGDITQRALELLRTADLIVCEDTRVTAKLLARYGIATRMLPYHEHNAERMRPELLQRLAEGRAIALVSDAGTPLVSDPGYKLVREAIAAGHEVTALPGASASLTALLLSGLPPDRFFFAGFLPAKSGERRRDLAGLAAIPSTLIFYESANRLAESLADMRAALADRPAAVARELTKLHEEVRRGSLGALADHYAKAGPPKGEIVIVVGPPLAETTAVS--EADLDRALKQALAHMSLKDAATAVAAATGRPRREIYARALALAG 314          
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: UPI001D04063A (16S rRNA (cytidine(1402)-2'-O)-methyltransferase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001D04063A)

HSP 1 Score: 327 bits (839), Expect = 4.390e-109
Identity = 181/282 (64.18%), Postives = 206/282 (73.05%), Query Frame = 1
Query:   43 GVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGA-LDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
            G    LA GLYLVATPIGNLGDIS RAL+ L   D IACED+R T +LL   G+      YH+HS    R  +L  +A G+ VALVSDAGTPL+SDPGFKLVREAIA+G  V+ALPGPSAPL+AL+LSGLPSDRFFF GFLPPK AARR  L GL  ++ASLIFFE A R+  CLADMA +LG R AAVARELTKL EEVRR  L  L  HY EAGPP+GE+VIVVGPP  G A+    EG  LD  L +AL    L++A A VAA +GLPR+QVYARAL L
Sbjct:   10 GTRARLAAGLYLVATPIGNLGDISRRALEVLRRADRIACEDTRVTRKLLSAEGIATAVTTYHDHSGARDRRRLLDGVAAGEAVALVSDAGTPLVSDPGFKLVREAIAEGLAVTALPGPSAPLVALLLSGLPSDRFFFGGFLPPKSAARREALQGLRDLDASLIFFEGASRVASCLADMAAVLGPREAAVARELTKLHEEVRRGPLAELAAHYGEAGPPRGEIVIVVGPPAKGAAE----EGFDLDAALTDALTHASLRDAAATVAAASGLPRRQVYARALQL 287          
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A5J6N4N5_9PROT (Ribosomal RNA small subunit methyltransferase I n=2 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6N4N5_9PROT)

HSP 1 Score: 327 bits (839), Expect = 1.420e-108
Identity = 174/277 (62.82%), Postives = 207/277 (74.73%), Query Frame = 1
Query:   61 APGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALTG 891
            A GLYLVATPIGNLGDI+ RAL  L   D+I CED+R TA+LL  Y +    + YHEH+   +R  +L+RLA+GQ +ALVSDAGTPL+SDPG+KLVR AI  G  V+ALPG SA L AL+LSGLP DRFFF GFLPP+   RR  L  +A I +SLIF+ESA RL + LADMA +LG+RPAAVARELTKL EEVRR TL AL  HY +AGPPKGE+V+V GPP+   A +S  +  LD  L +ALAR  LK+AVA VAA TG PR++VYARALAL G
Sbjct:   58 AAGLYLVATPIGNLGDITERALTLLRGVDLIVCEDTRVTAKLLARYAIAARTLPYHEHNAERMRPELLRRLAEGQSIALVSDAGTPLVSDPGYKLVRAAIEAGHAVTALPGASASLTALLLSGLPPDRFFFAGFLPPRSGERRRELETMAAIPSSLIFYESANRLGESLADMAAVLGDRPAAVARELTKLHEEVRRGTLAALAAHYAQAGPPKGEIVVVAGPPLEEAASISAAD--LDATLRQALARMSLKDAVAAVAATTGRPRREVYARALALAG 332          
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: K2J5N3_9PROT (Ribosomal RNA small subunit methyltransferase I n=2 Tax=Oceanibaculum indicum TaxID=526216 RepID=K2J5N3_9PROT)

HSP 1 Score: 321 bits (823), Expect = 1.100e-106
Identity = 171/290 (58.97%), Postives = 209/290 (72.07%), Query Frame = 1
Query:   16 SQISTNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
            S+  T+R +  +  L P LY+VATPIGNLGD++ RA   LA+ D++ACED+R T +LL  +GLK P IAY++H+   +R T+L  + QG+ VALVSDAGTPLISDPG+KLVR+A   G  V+A PGPSA L AL+L+GLP+DRF F GFLPPK  ARR+ L  LA + A+L+F+ES  RL   LADMA +LG+RP AVARELTKLFEEVRRD L AL  HY EAGPPKGE+VIVVG P   +A        LD  L  ALA    ++A A VA +TGLPRKQVYARAL L
Sbjct:    2 SRSQTDRKITSAASLTPALYIVATPIGNLGDLTMRARDILASADLVACEDTRVTGKLLSAFGLKRPLIAYNDHNADKVRPTLLDAVRQGKAVALVSDAGTPLISDPGYKLVRDAAEAGLAVTAAPGPSALLAALVLAGLPTDRFLFAGFLPPKSGARRTALGELASVPATLVFYESGPRLAASLADMAAVLGDRPGAVARELTKLFEEVRRDPLSALAAHYAEAGPPKGEIVIVVGAPAEQEASAD----TLDAALRRALAGNSTRDAAALVAGETGLPRKQVYARALEL 287          
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: UPI0004269381 (16S rRNA (cytidine(1402)-2'-O)-methyltransferase n=2 Tax=Salinarimonas TaxID=690086 RepID=UPI0004269381)

HSP 1 Score: 321 bits (823), Expect = 1.700e-106
Identity = 164/279 (58.78%), Postives = 207/279 (74.19%), Query Frame = 1
Query:   49 SKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
            ++P+APGLY+VATPIGNL D+S RAL TLAA D +  ED+R T  LL HYG+  P ++YHEHS   +RE +L R+ +GQ +ALVSDAGTPL+SDPG+KLV+EAIA+G  V  +PGPSA L AL++SGLPSDRFFF+GFLP K  ARR+ L  LAGI  +L+ FES  RLP+ LAD A +LG RPA +ARELTK+FE VRR TL  L   + EAGPPKGE+V+++G   S ++     E  LD  L  ALA   +K+A A VAA+TGLP+++VYARAL L
Sbjct:   32 AEPIAPGLYVVATPIGNLADVSFRALATLAAADAVLAEDTRVTRHLLAHYGIATPLVSYHEHSGEGVRERMLARVREGQALALVSDAGTPLVSDPGYKLVQEAIAEGLTVVPIPGPSAILSALVVSGLPSDRFFFEGFLPAKSGARRARLEALAGIPGTLLLFESPHRLPEMLADAAAVLGPRPAVMARELTKMFETVRRGTLETLAQEFAEAGPPKGEIVVLIGE-ASSESRREEAESGLDAALARALASHSIKDAAALVAAETGLPKREVYARALVL 309          
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: A0A2W6YRW8_9HYPH (Ribosomal RNA small subunit methyltransferase I n=1 Tax=Chelatococcus sp. TaxID=1953771 RepID=A0A2W6YRW8_9HYPH)

HSP 1 Score: 320 bits (821), Expect = 2.530e-106
Identity = 168/280 (60.00%), Postives = 205/280 (73.21%), Query Frame = 1
Query:   49 SKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALT 888
            ++PLAPGL++VATPIGNL DIS RAL TLAA D +  ED+R +  LL HYG+  P   YHEH+   +R  +L +L +G ++AL+SDAGTPL+SDPGFKLV E +A+G  V+ +PGPSA L AL+L+GLP+DRFFF+GFLPPK AARR+ L  LA I  SL+FFES RRL + L D A +LG RP AVARELTK  E VRR TLP L  HY E    +GE+V+++GPP  G   L   E ALD RL  AL    LKEAVAQVAAQTG+PR++VYARAL LT
Sbjct:   23 AEPLAPGLHIVATPIGNLRDISFRALATLAAADAVLAEDTRTSKTLLAHYGISTPLYPYHEHNAEQMRPKVLAKLREGGKLALISDAGTPLVSDPGFKLVAEVVAEGLPVTGVPGPSAVLAALVLAGLPTDRFFFEGFLPPKAAARRTRLTELAAIPGSLVFFESPRRLAEMLTDAAAVLGARPGAVARELTKFHETVRRGTLPELARHYGEQEEARGEIVVIIGPP--GAEALLPAEDALDERLKTALESLSLKEAVAQVAAQTGVPRRKVYARALELT 300          
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Match: UPI00115E0C5A (16S rRNA (cytidine(1402)-2'-O)-methyltransferase n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115E0C5A)

HSP 1 Score: 321 bits (822), Expect = 2.570e-106
Identity = 174/295 (58.98%), Postives = 214/295 (72.54%), Query Frame = 1
Query:    1 ENAIPSQISTNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDVIACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALVSDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFFFQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRPAAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADLSGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALAL 885
            +  +P +  +N G   SKP A GLYLVATPIGN+ DI+ RAL  LA  D++ACED+R TA+LL   GLK P  AYH+H+       +L++L  G  VALVSDAGTPL+SDPGF+LVR  + +G  V++LPGPSAPL AL LSGLPSDRF F GFLP K +ARR++LA LAG+ A+LIFFES  RL + L DMA +LG R AAVARELTKLFEEVRR  LP L  HY EAG PKGEVV+VVGPP  G+A+ +  E  +D  L +ALA   +++A A VAA TG PR+++YARAL L
Sbjct:   20 DTTVPGEAQSNGGTAGSKPAA-GLYLVATPIGNIRDITLRALDVLAGADLVACEDTRVTAKLLGLLGLKAPLFAYHDHNADRAGPALLEKLRAGLAVALVSDAGTPLVSDPGFRLVRACVEEGIPVTSLPGPSAPLTALQLSGLPSDRFLFAGFLPNKSSARRTVLAELAGVPATLIFFESPHRLAESLEDMAAVLGGRDAAVARELTKLFEEVRRAPLPTLAAHYAEAGGPKGEVVVVVGPP--GEAEAASAED-VDALLRDALADASVRDAAATVAAATGRPRREIYARALEL 310          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1631.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TT41_9PROT4.500e-13067.93Ribosomal RNA small subunit methyltransferase I n=... [more]
A0A353LNG6_9PROT2.830e-11362.24Ribosomal RNA small subunit methyltransferase I n=... [more]
A0A843RLX1_9PROT3.560e-11163.73Ribosomal RNA small subunit methyltransferase I n=... [more]
A0A5J6MRJ2_9PROT4.760e-11063.18Ribosomal RNA small subunit methyltransferase I n=... [more]
UPI001D04063A4.390e-10964.1816S rRNA (cytidine(1402)-2'-O)-methyltransferase n... [more]
A0A5J6N4N5_9PROT1.420e-10862.82Ribosomal RNA small subunit methyltransferase I n=... [more]
K2J5N3_9PROT1.100e-10658.97Ribosomal RNA small subunit methyltransferase I n=... [more]
UPI00042693811.700e-10658.7816S rRNA (cytidine(1402)-2'-O)-methyltransferase n... [more]
A0A2W6YRW8_9HYPH2.530e-10660.00Ribosomal RNA small subunit methyltransferase I n=... [more]
UPI00115E0C5A2.570e-10658.9816S rRNA (cytidine(1402)-2'-O)-methyltransferase n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1631contigP-wetherbeei_contig1631:556..1455 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1123229.AUBC01000004_gene3130
Preferred namersmI
PFAMsTP_methylase
Model size900
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07056
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.78e-107
EggNOG OGsCOG0313@1|root,COG0313@2|Bacteria,1MU0E@1224|Proteobacteria,2TR14@28211|Alphaproteobacteria,3JTNR@41294|Bradyrhizobiaceae
EC2.1.1.198
DescriptionCatalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
Cds size900
COG categoryH
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186082.8803067-CDS-P-wetherbeei_contig1631:555..14551683186082.8803067-CDS-P-wetherbeei_contig1631:555..1455Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1631 556..1455 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1631.1.1prot_P-wetherbeei_contig1631.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1631 556..1455 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1631.1.1

>prot_P-wetherbeei_contig1631.1.1 ID=prot_P-wetherbeei_contig1631.1.1|Name=mRNA_P-wetherbeei_contig1631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=300bp
ENAIPSQISTNRGVGVSKPLAPGLYLVATPIGNLGDISHRALQTLAACDV
IACEDSRATARLLQHYGLKVPRIAYHEHSTPAIRETILQRLAQGQRVALV
SDAGTPLISDPGFKLVREAIAQGAFVSALPGPSAPLMALILSGLPSDRFF
FQGFLPPKGAARRSLLAGLAGIEASLIFFESARRLPQCLADMAQMLGNRP
AAVARELTKLFEEVRRDTLPALRDHYVEAGPPKGEVVIVVGPPVSGDADL
SGQEGALDNRLHEALARCRLKEAVAQVAAQTGLPRKQVYARALALTGKQ*
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mRNA from alignment at P-wetherbeei_contig1631:556..1455+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1631.1.1 ID=mRNA_P-wetherbeei_contig1631.1.1|Name=mRNA_P-wetherbeei_contig1631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=900bp|location=Sequence derived from alignment at P-wetherbeei_contig1631:556..1455+ (Phaeothamnion wetherbeei SAG_119_79)
GAAAATGCGATCCCGTCACAAATCAGTACTAACCGGGGCGTGGGTGTAAG TAAACCGCTTGCGCCGGGGCTGTATCTGGTGGCGACGCCGATCGGCAATC TTGGCGATATATCGCACCGCGCGCTGCAAACGCTGGCGGCCTGCGACGTG ATCGCCTGCGAGGATAGCCGGGCCACGGCCCGTTTGCTGCAACATTACGG GCTGAAAGTGCCGCGCATCGCCTATCATGAACATAGCACACCCGCCATAC GCGAGACGATATTGCAGCGGCTGGCGCAAGGCCAGCGGGTGGCGCTGGTC AGTGATGCGGGAACCCCGCTGATTTCTGACCCGGGTTTCAAACTGGTGCG CGAAGCGATTGCGCAGGGGGCTTTTGTCAGCGCGCTGCCCGGCCCCTCGG CCCCGCTGATGGCGCTGATCCTGTCAGGCCTGCCCAGTGACCGGTTCTTC TTTCAGGGATTTCTGCCGCCAAAGGGCGCGGCGCGGCGCAGCCTGCTGGC AGGCCTTGCAGGCATTGAGGCAAGCCTGATCTTTTTTGAAAGCGCCCGGC GGCTGCCGCAATGCCTGGCGGATATGGCGCAGATGCTGGGAAACCGCCCA GCAGCGGTGGCGCGCGAACTGACCAAATTATTTGAAGAAGTGCGCCGTGA TACTTTGCCCGCATTGCGCGATCATTACGTCGAGGCCGGGCCTCCAAAGG GCGAGGTGGTTATTGTCGTTGGGCCGCCAGTCAGCGGCGATGCGGATCTA TCTGGCCAGGAGGGCGCGCTGGATAATCGCCTGCATGAGGCCCTTGCCAG GTGCCGCCTGAAGGAAGCGGTCGCCCAGGTGGCGGCGCAAACAGGTCTGC CGCGCAAACAGGTCTATGCCCGCGCCCTGGCGCTTACAGGAAAACAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1631:556..1455+

>mRNA_P-wetherbeei_contig1631.1.1 ID=mRNA_P-wetherbeei_contig1631.1.1|Name=mRNA_P-wetherbeei_contig1631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=900bp|location=Sequence derived from alignment at P-wetherbeei_contig1631:556..1455+ (Phaeothamnion wetherbeei SAG_119_79)
GAAAATGCGATCCCGTCACAAATCAGTACTAACCGGGGCGTGGGTGTAAG
TAAACCGCTTGCGCCGGGGCTGTATCTGGTGGCGACGCCGATCGGCAATC
TTGGCGATATATCGCACCGCGCGCTGCAAACGCTGGCGGCCTGCGACGTG
ATCGCCTGCGAGGATAGCCGGGCCACGGCCCGTTTGCTGCAACATTACGG
GCTGAAAGTGCCGCGCATCGCCTATCATGAACATAGCACACCCGCCATAC
GCGAGACGATATTGCAGCGGCTGGCGCAAGGCCAGCGGGTGGCGCTGGTC
AGTGATGCGGGAACCCCGCTGATTTCTGACCCGGGTTTCAAACTGGTGCG
CGAAGCGATTGCGCAGGGGGCTTTTGTCAGCGCGCTGCCCGGCCCCTCGG
CCCCGCTGATGGCGCTGATCCTGTCAGGCCTGCCCAGTGACCGGTTCTTC
TTTCAGGGATTTCTGCCGCCAAAGGGCGCGGCGCGGCGCAGCCTGCTGGC
AGGCCTTGCAGGCATTGAGGCAAGCCTGATCTTTTTTGAAAGCGCCCGGC
GGCTGCCGCAATGCCTGGCGGATATGGCGCAGATGCTGGGAAACCGCCCA
GCAGCGGTGGCGCGCGAACTGACCAAATTATTTGAAGAAGTGCGCCGTGA
TACTTTGCCCGCATTGCGCGATCATTACGTCGAGGCCGGGCCTCCAAAGG
GCGAGGTGGTTATTGTCGTTGGGCCGCCAGTCAGCGGCGATGCGGATCTA
TCTGGCCAGGAGGGCGCGCTGGATAATCGCCTGCATGAGGCCCTTGCCAG
GTGCCGCCTGAAGGAAGCGGTCGCCCAGGTGGCGGCGCAAACAGGTCTGC
CGCGCAAACAGGTCTATGCCCGCGCCCTGGCGCTTACAGGAAAACAATGA
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