mRNA_P-wetherbeei_contig16299.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: A0A835ZNU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNU0_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.770e-61 Identity = 89/119 (74.79%), Postives = 105/119 (88.24%), Query Frame = 1
Query: 22 AAELPTQAARQQALYDLVYVERIPEEAKMSSGLLLPGKENPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSFRKFSFVKYQNICAVLPNSRRFEDDARAA 378
A ELP++A RQQALYD+VYVER+PE +M+SGL LPGKENPRMHVCK++S+G GREGESG +V NAG++PGDLVYVKDPWGIGP+DDEFS KFSFV+YQNICAV+PNS +E ARAA
Sbjct: 2 AVELPSKAVRQQALYDMVYVERLPEAQQMTSGLFLPGKENPRMHVCKIVSLGQGREGESGTLVENAGLKPGDLVYVKDPWGIGPKDDEFSNHKFSFVRYQNICAVIPNSDAYEASARAA 120
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: A0A6H5L438_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L438_9PHAE) HSP 1 Score: 192 bits (488), Expect = 4.970e-60 Identity = 93/133 (69.92%), Postives = 114/133 (85.71%), Query Frame = 1
Query: 13 MSAAAELPTQAARQQALYDLVYVERIPEEAKMSSGLLLPGKENPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSFRKFSFVKYQNICAVLPNSRRFEDDARAAAADKAAAERAA 411
MSAAAELPTQA RQ+ALYD+VYVER+PEE +M+SGL LP K NPRMHVCKV+S+G+GREGESG V PN ++PGDLV+VKDP+GIGPRDDEF+ +KFSFV+Y +ICAV+PNS+ FED AR A +A ++AA
Sbjct: 44 MSAAAELPTQAKRQKALYDMVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSVGNGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSQDFEDAAREAGKLQAEMDKAA 176
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: D7FXF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF3_ECTSI) HSP 1 Score: 187 bits (475), Expect = 1.180e-58 Identity = 92/133 (69.17%), Postives = 112/133 (84.21%), Query Frame = 1
Query: 13 MSAAAELPTQAARQQALYDLVYVERIPEEAKMSSGLLLPGKENPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSFRKFSFVKYQNICAVLPNSRRFEDDARAAAADKAAAERAA 411
MSAAAELPTQA RQ+ALYD+VYVER+PEE +M+SGL LP K NPRMHVCKV+SIG+GREGESG V PN ++ GDLV+VKDP+GIGPRDDEF+ +KFSFV+Y +ICAV+PNS FE+ AR A +A ++AA
Sbjct: 1 MSAAAELPTQAQRQKALYDMVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSIGNGREGESGNVTPNDAVKQGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSEDFENAAREAGKLQAEIDKAA 133
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: A0A6T5R4I0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5R4I0_HETAK) HSP 1 Score: 134 bits (337), Expect = 4.460e-37 Identity = 58/104 (55.77%), Postives = 78/104 (75.00%), Query Frame = 1
Query: 28 ELPTQAARQQALYDLVYVERIPEEAKMSSGLLLPGKENPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSFRKFSFVKYQNICAVL 339
ELP Q A+Q+ LY +VYVER+PE + + GL LPG+ENPR H+C+V+S+G G EGESG V + G+ PGD VYVK+PWGIG +D++F RKFSF++Y +C
Sbjct: 42 ELP-QEAKQECLYGMVYVERLPEPVQTTGGLFLPGQENPRRHICRVVSVGPGVEGESGAVATSRGLAPGDYVYVKNPWGIGAKDEQFGRRKFSFLRYNEVCGTF 144
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: A0A8J2SZF1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZF1_9STRA) HSP 1 Score: 120 bits (300), Expect = 5.240e-32 Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 1
Query: 49 RQQALYDLVYVERIPEEAKMSSGLLLPGKENPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSF----RKFSFVKYQNICAVL 339
RQQALYDLVYVERI + GL L E+P MH+ KV+S+G+G +G SG+VV NAG++PGDLVY K PWGIGP+D+EF R+FSF++Y +I V+
Sbjct: 42 RQQALYDLVYVERIKPPETSAGGLFLVAPEDPPMHLAKVVSVGAGGQGNSGLVVENAGLKPGDLVYCKHPWGIGPKDEEFGEDGQERRFSFLRYTDIAGVV 142
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: A0A7S1UEZ3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEZ3_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.900e-28 Identity = 49/105 (46.67%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 31 LPTQAARQQALYDLVYVERIPEEAKMSSGLLLP--GKENPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSFRKFSFVKYQNICAVL 339
+P +AA Q ALYD++YVER+ E+ + + G+ LP N +H+ +V+S+G GREGE+G+ N + GD+V++++ WGIGPRD+EF RKFSFV+ Q++CA +
Sbjct: 84 VPEEAAVQNALYDMIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCAHM 188
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: A0A7S1XW59_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW59_9STRA) HSP 1 Score: 111 bits (278), Expect = 6.490e-28 Identity = 49/105 (46.67%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 31 LPTQAARQQALYDLVYVERIPEEAKMSSGLLLP--GKENPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSFRKFSFVKYQNICAVL 339
+P +AA Q ALYD++YVER+ E+ + + G+ LP N +H+ +V+S+G GREGE+G+ N + GD+V++++ WGIGPRD+EF RKFSFV+ Q++CA +
Sbjct: 104 VPEEAAVQNALYDMIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCAHM 208
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: A0A7R9U985_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U985_9STRA) HSP 1 Score: 110 bits (274), Expect = 9.930e-28 Identity = 52/116 (44.83%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 RPLVMSAAAE-LPTQAARQQALYDLVYVERIPEEAKMSSGLLLPGKE--NPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSFRKFSFVKYQNICAVL 339
RP+ + E +P +A++Q ALYD+VYVER+ E+ + + G+ LP N +H+ +V+S+G GREGE+G N + GD+V++++ WGIGPRD+EF RKFSFV+ Q++CA +
Sbjct: 55 RPMELRVTDEPVPEEASKQIALYDMVYVERLGEDQQSAGGVFLPKVSGGNQDLHMARVVSVGDGREGENGCKTMNGNYKQGDIVFLRNAWGIGPRDEEFFGRKFSFVREQDVCAHI 170
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: A0A7S1UZ75_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ75_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.750e-25 Identity = 46/102 (45.10%), Postives = 72/102 (70.59%), Query Frame = 1
Query: 64 YDLVYVERIPEEAKMSSGLLLPGKENPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSF-RKFSFVKYQNICAVLPNSRRFEDD 366
YD+V ERI + K SGL +P ++ P++H+CKV+S+G GRE E+G++ P I+ GD+V K+PWGIGP+D+E + +K SF++ +I AV+P + ED+
Sbjct: 61 YDMVLCERIQGKPKTESGLFVPQEDLPKLHICKVLSMGPGREEENGMIAPMPDIKVGDIVVAKNPWGIGPKDEETADGKKLSFMRALDIAAVIPGGMKIEDE 162
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Match: A0A7S1E0E1_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E0E1_9STRA) HSP 1 Score: 101 bits (252), Expect = 4.650e-25 Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 1
Query: 64 YDLVYVERIPEEAKMSSGLLLPGKENPRMHVCKVISIGSGREGESGIVVPNAGIQPGDLVYVKDPWGIGPRDDEFSF-RKFSFVKYQNICAVL 339
YD+V ERI KM SGL +P ++ P++H+CKV+S+G GRE E+G++ P I+ GD+V K+PWGIGP+D+E S +K SF++ Q+I AV+
Sbjct: 18 YDMVLCERIQGRPKMESGLFVPDEDLPKLHICKVLSLGPGREEENGMIAPMPDIKVGDIVIAKNPWGIGPKDEETSDGKKLSFMRSQDIAAVV 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16299.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16299.1.1 >prot_P-wetherbeei_contig16299.1.1 ID=prot_P-wetherbeei_contig16299.1.1|Name=mRNA_P-wetherbeei_contig16299.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp MSAAAELPTQAARQQALYDLVYVERIPEEAKMSSGLLLPGKENPRMHVCKback to top mRNA from alignment at P-wetherbeei_contig16299:743..1323+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16299.1.1 ID=mRNA_P-wetherbeei_contig16299.1.1|Name=mRNA_P-wetherbeei_contig16299.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=581bp|location=Sequence derived from alignment at P-wetherbeei_contig16299:743..1323+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16299:743..1323+ >mRNA_P-wetherbeei_contig16299.1.1 ID=mRNA_P-wetherbeei_contig16299.1.1|Name=mRNA_P-wetherbeei_contig16299.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig16299:743..1323+ (Phaeothamnion wetherbeei SAG_119_79)back to top |