mRNA_P-wetherbeei_contig16226.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: D7FSM0_ECTSI (Divalent cation transporter, carboxyterminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM0_ECTSI) HSP 1 Score: 184 bits (467), Expect = 2.890e-54 Identity = 95/135 (70.37%), Postives = 110/135 (81.48%), Query Frame = 1
Query: 1 VYVTDEGQFAGVISMAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSGSGGGESYFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYYQ 405
+YVT+ G G I+MA LLT+ + V ++R EE+L EGDSWE+AAHRLR ANV+AAPVVD DG LVAVLNPSDLL+EMEIEATDD+MR SGSGGGESYFGTPL LVASRVGWLVSLL LQS SS++L +Q
Sbjct: 133 IYVTENGTLKGYITMAVLLTHQSETPVAELLRELEEMLHEGDSWEDAAHRLRQANVLAAPVVDSDGVLVAVLNPSDLLQEMEIEATDDIMRQSGSGGGESYFGTPLPSLVASRVGWLVSLLCLQSFSSLILQSFQ 267
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: A0A6H5JKL2_9PHAE (CBS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL2_9PHAE) HSP 1 Score: 185 bits (469), Expect = 2.190e-53 Identity = 96/135 (71.11%), Postives = 109/135 (80.74%), Query Frame = 1
Query: 1 VYVTDEGQFAGVISMAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSGSGGGESYFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYYQ 405
+YVT+ G G I+MA LLT+ D V ++R EE+L EGDSWE+ AHRLR ANV+AAPVVD DG LVAVLNPSDLL+EMEIEATDD+MR SGSGGGESYFGTPL LVASRVGWLVSLL LQS SSV+L +Q
Sbjct: 266 IYVTENGTLKGYITMAVLLTHQSDTPVADLLRELEEMLHEGDSWEDTAHRLRQANVLAAPVVDSDGVLVAVLNPSDLLQEMEIEATDDIMRQSGSGGGESYFGTPLPSLVASRVGWLVSLLCLQSFSSVILQSFQ 400
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: A0A835YYN6_9STRA (CBS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYN6_9STRA) HSP 1 Score: 175 bits (443), Expect = 2.730e-52 Identity = 88/121 (72.73%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 43 MAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSGSGGGESYFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYYQ 405
MA+LLTN+PD V V+ SEEVL+EGD+WEEAA RLR A + +APVVDEDGFLVA+LNP+DLL EMEIEATDD+ R+SGSGGGE+YFGTPL +LV R GWLVSLL+LQSLSSV+LT++Q
Sbjct: 1 MASLLTNTPDTLVADVVIKSEEVLKEGDAWEEAAQRLRKAGISSAPVVDEDGFLVAILNPTDLLMEMEIEATDDISRFSGSGGGETYFGTPLMKLVLRRCGWLVSLLMLQSLSSVILTHFQ 121
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: A0A4D9CYH9_9STRA (CBS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYH9_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.550e-32 Identity = 65/134 (48.51%), Postives = 95/134 (70.90%), Query Frame = 1
Query: 1 VYVTDEGQFAGVISMAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSGSGGGESYFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYY 402
++VTD G+ G ++ LL + ++R+ E V+R+ D +++A +RA + APVV ED +V ++ PSD+LKEME+EATDDV RYSGSG ES+FGTP+ +LV +R WLVSLL+LQSLSS++LT++
Sbjct: 325 IFVTDCGRLVGYVTSMDLLVQDRVAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHF 458
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: A0A0G4EE00_VITBC (CBS domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EE00_VITBC) HSP 1 Score: 116 bits (290), Expect = 4.770e-28 Identity = 66/142 (46.48%), Postives = 94/142 (66.20%), Query Frame = 1
Query: 1 VYVTDEGQFAGVISMAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSG-------SGGGESYFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYYQ 405
+YVT EG+ G ++M LL SP ++ V++ +E V+R ++ EEA+ RLR V AP+VDE G LV +L+P+DLL EME E T+D++R+ G G+SYF TP+ + SR GW+VSLL LQSLSS++LT +Q
Sbjct: 158 IYVTQEGELRGYVTMGDLLMASPHTPLKTVLKPTE-VVRISENLEEASKRLRQRFVTMAPLVDEKGQLVGILSPNDLLNEMEAELTEDLLRFEGIFPSETMEKVGDSYFATPVIEHIKSRAGWVVSLLFLQSLSSIVLTKFQ 298
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: A0A6T6NC75_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NC75_9RHOD) HSP 1 Score: 110 bits (274), Expect = 9.390e-26 Identity = 61/132 (46.21%), Postives = 84/132 (63.64%), Query Frame = 1
Query: 22 QFAGVISMAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSGSGG----GESYFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYYQ 405
+ G ++M LL PDE V +V + +E VL D + +LR NV+ APVVD + LV VL +D+++E+E EATDD++RY G GG ESYFGT + +L R+ WLV LL+LQSLSS++L YQ
Sbjct: 178 KLVGYVTMLDLLLAKPDEVVENVSKTNELVLSIDDDLDNVLRKLRRDNVLIAPVVDVEEKLVGVLTATDMIRELEFEATDDLLRYGGVGGDEETAESYFGTSIRKLFFGRITWLVGLLMLQSLSSIVLGRYQ 309
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: A0A7J7ILB5_9RHOD (CBS domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILB5_9RHOD) HSP 1 Score: 89.0 bits (219), Expect = 5.670e-18 Identity = 57/143 (39.86%), Postives = 82/143 (57.34%), Query Frame = 1
Query: 1 VYVTDE--GQFAGVISMAALLTNSPDEA-VRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSG------SGGGESYFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYY 402
+YV D G +S+ LL DE + H +R VL + +E A RLR A + APVVD + LV ++ +D+++EME+EATDD++R+ G + ESYF T V R WLV+LLLLQS+SS++L +Y
Sbjct: 327 LYVLDPCTSGLVGFLSLEDLLFAGDDEQKIDHFVRPCPTVLTVDEEFEAAVRRLRNAGALTAPVVDSELRLVGLITAADIIREMELEATDDILRFGGVESPLQTNDIESYFKTSTRSFVIGRSAWLVALLLLQSVSSIVLGHY 469
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: M2WSY5_GALSU (Magnesium transporter, MgtE family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WSY5_GALSU) HSP 1 Score: 86.7 bits (213), Expect = 1.220e-17 Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 1
Query: 13 DEGQFAGVISMAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSGSGGGE---SYFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYYQ 405
+ G+ G I + LL ++ V M+ + V R+ S E AA ++R+ V APVVD +G + ++N D+++E+E EA +D MR SG + SYF T L+ R+ WLV+LLL QS+SS++L ++Q
Sbjct: 42 ENGELRGYILIEELLFVELEQNVTVFMKKCDVVFRDDTSLEIAARKVRSFGVFCAPVVDSEGNFLGIVNALDIIREVEFEAAEDFMRVSGLNSVDVFQSYFETSSFSLIRERLSWLVALLLFQSISSIILGFFQ 175
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: A0A7C1KDM0_9CHLR (Magnesium transporter MgtE (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1KDM0_9CHLR) HSP 1 Score: 84.3 bits (207), Expect = 7.630e-17 Identity = 49/137 (35.77%), Postives = 76/137 (55.47%), Query Frame = 1
Query: 1 VYVTDEGQ-FAGVISMAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSGSGGGES-YFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYYQ 405
VYV D Q GV+S L T P+ VR +M +RE EE A +++A PVVDEDG + ++ D++ ++ EAT+D+ + GS ++ YF TPL R+V R GWL +L + + L+S + Y++
Sbjct: 147 VYVLDRQQHLLGVVSFRELFTAPPEALVRDIMHTDLVTVREDTDQEEVARLFAEHDLLAIPVVDEDGRMKGLVTVDDIVDVLQEEATEDIQKIGGSEALDAPYFDTPLPRMVRKRAGWLAALFVSEMLTSTAMGYFE 283
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Match: A0A7S3K4L6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4L6_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.080e-16 Identity = 48/131 (36.64%), Postives = 75/131 (57.25%), Query Frame = 1
Query: 13 DEGQFAGVISMAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRLRAANVMAAPVVDEDGFLVAVLNPSDLLKEMEIEATDDVMRYSGSGG-GESYFGTPLSRLVASRVGWLVSLLLLQSLSSVLLTYY 402
+EG+ G + L+ P + + + V++ DS ++ LR N+ APVVD +G LV L P D++ +E EAT+DV R + SGG G +YF + ++ +R WL+SLLLLQS+SS +L +
Sbjct: 173 EEGKLDGYVRATELMLGEPYKKLGDIAIPLSVVVQSEDSIDDTVQLLRQENITIAPVVDSNGVLVTALAPLDVISALEAEATEDVARIALSGGIGSTYFNASIKAIILNRFSWLLSLLLLQSISSAVLASF 303 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16226.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16226.1.1 >prot_P-wetherbeei_contig16226.1.1 ID=prot_P-wetherbeei_contig16226.1.1|Name=mRNA_P-wetherbeei_contig16226.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp VYVTDEGQFAGVISMAALLTNSPDEAVRHVMRNSEEVLREGDSWEEAAHRback to top mRNA from alignment at P-wetherbeei_contig16226:27..1175- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16226.1.1 ID=mRNA_P-wetherbeei_contig16226.1.1|Name=mRNA_P-wetherbeei_contig16226.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1149bp|location=Sequence derived from alignment at P-wetherbeei_contig16226:27..1175- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16226:27..1175- >mRNA_P-wetherbeei_contig16226.1.1 ID=mRNA_P-wetherbeei_contig16226.1.1|Name=mRNA_P-wetherbeei_contig16226.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig16226:27..1175- (Phaeothamnion wetherbeei SAG_119_79)back to top |