mRNA_P-wetherbeei_contig1614.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1614.1.2
Unique NamemRNA_P-wetherbeei_contig1614.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A7S1UIY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIY8_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.420e-66
Identity = 132/272 (48.53%), Postives = 182/272 (66.91%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLAL-RKAELTGGDPG---LAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGYAPGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEG--RPLLLEPLPYADFYRRRQLREDASNVEELFPSGAASAPLA 3562
            PVVL +GGGMGAGKSS+L+E+ N   WR   ++AV+IEAD+IKM  P+F  L +K E   G  G   LA +VH+FSTSAAN+ LLAAV  G+D+IMDGTL W EYVRQT+ M++ AH + +RIGPGY  GG + E+YWE   E   +E+ R   Y++ VVG  C P LAV+RG+RRKLL  RGVP+  QLRSH+LF+E+F +Y  +VD A+L+DT+   +P L+A K  G  +  L+ P  +  F + + +   A++  +L+   +    LA
Sbjct:   18 PVVLFLGGGMGAGKSSILKEVNNQPPWRGLLANAVIIEADKIKMFDPIFNHLAKKEEADRGRAGVGELASFVHNFSTSAANKMLLAAVRSGRDVIMDGTLTWYEYVRQTINMVKNAHRYEYRIGPGYVEGG-SVERYWEAMNELCLDEQERRMQYEVHVVGVCCEPHLAVSRGLRRKLLTRRGVPILSQLRSHKLFSENFCKYVRMVDRAALYDTSDFGKPTLIARKGGGLGKTFLVLPERFLAFVKFKDMNIKANSYLDLYQQTSVEGGLA 288          
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: UPI0018AE0BD4 (uncharacterized protein LOC120277991 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE0BD4)

HSP 1 Score: 208 bits (530), Expect = 3.640e-54
Identity = 115/260 (44.23%), Postives = 157/260 (60.38%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFP 3535
            PV+LLMGGGMGAGKS++L++I+   FW    ++AVV+EAD  K    ++ AL            A+ VH  ST AA+  L+ A+N G+D+IMDGTL+W  +V QT+ M+R  H  R+R+G GY  A  G   E YWE   E + +E  + RPY+IE+VG  C   LAV RGIRR +L+GR V V  QL+SH+ FA  F  Y  LVD A L+ + +    P+L+A K     LL+EP  Y       +L EDA +V E++P
Sbjct:  218 PVLLLMGGGMGAGKSTVLKDILKEAFWSGAAANAVVVEADAFKETDVIYRALSSRGHHNDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWEPFVEQTIAMVRAIHRRRYRMGVGYKVADDGSVMENYWEPAEEENNDENNKRRPYRIELVGVVCDAYLAVVRGIRRAILMGRAVRVKSQLKSHKRFANAFPRYCQLVDHARLYSSNSMGTAPKLIAWKDGDSSLLIEPQEYTCLENVAKLNEDADSVHEVYP 477          
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A2G3C6C9_CAPCH (Zeta_toxin domain-containing protein n=2 Tax=Solanoideae TaxID=424551 RepID=A0A2G3C6C9_CAPCH)

HSP 1 Score: 199 bits (507), Expect = 3.860e-53
Identity = 111/259 (42.86%), Postives = 154/259 (59.46%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELF 3532
            PV+LLMGGGMGAGKS++L++I+   FW E   +AVV+EAD  K    ++ AL            A+ VH  ST AA+  L+ A+N G+D+IMDGTL+W  +V QT+ M R  H HR+R+G GY  A  G   E YWE+  +      +  +PY+IE+VG  C P LAV RGIRR +  GR V V  QL SH+ FA  F +Y  LVD A L+ T A   +P L+A K     +L+EP         ++++E+A ++ EL+
Sbjct:   30 PVLLLMGGGMGAGKSTVLKDILKQSFWSEAAGNAVVVEADAFKETDVIYRALSSRGHHNDMLQTAELVHQNSTDAASSLLVTALNEGRDVIMDGTLSWEPFVEQTIAMARNVHQHRYRMGEGYKVAEDGTVTENYWEQIEQGEESANKMSKPYRIELVGVVCDPYLAVVRGIRRAIATGRAVRVKSQLTSHKRFANAFPKYCNLVDNARLYCTNALGSKPSLIAWKDGESKMLVEPEDIKCLEMVKKVKEEAESIYELY 288          
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A314KKN7_NICAT (Zeta_toxin domain-containing protein n=5 Tax=Nicotiana TaxID=4085 RepID=A0A314KKN7_NICAT)

HSP 1 Score: 204 bits (520), Expect = 9.890e-53
Identity = 114/267 (42.70%), Postives = 157/267 (58.80%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFPSGAASAP 3556
            PV+LLMGGGMGAGKS++L++I+   FW E  ++AVV+EAD  K    ++ AL            A+ VH  ST AA+  L+ A+N G+D+IMDGTL+W  +V QT+ M R  H HR+R+G GY  A  G   E YWE+  +   EE    +PY+IE+VG  C P LAV RGIRR +  GR V V  QL+SH+ FA  F +Y  +VD A L+ T     +P L+A K     +L+EP         R + E+A ++ EL+P    + P
Sbjct:  223 PVLLLMGGGMGAGKSTVLKDILKQSFWSEAAANAVVVEADAFKETDVIYRALSSRGHHHDMLQTAELVHQNSTDAASSLLVTALNEGRDVIMDGTLSWVPFVEQTIAMARNVHKHRYRMGEGYKVAEDGTVTENYWEQAEQEQGEEANITKPYRIELVGVVCDPYLAVVRGIRRAIGTGRAVRVKPQLKSHKRFANAFPKYCDIVDNARLYCTNVLGSKPTLIAWKDGENKMLVEPEDIKCLEMVRNVNEEAESIYELYPKDELAQP 489          
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: M4DFM7_BRARP (Zeta_toxin domain-containing protein n=13 Tax=Brassiceae TaxID=981071 RepID=M4DFM7_BRARP)

HSP 1 Score: 204 bits (520), Expect = 1.140e-52
Identity = 116/259 (44.79%), Postives = 160/259 (61.78%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELF 3532
            PV+LLMGGGMGAGKS++L++I+   FW E G DAVVIEAD  K    ++ AL            A+ VH  ST AA+  L+ A+N G+D+IMDGTLAWA ++ QT+ M R  H HR+R+G GY  +  G   E+YW +  E++ +++  L+PY+IE+VG  C   LAV RGIRR L++ R V V  QL+SH+ FA  F +Y  LVD+A L+ T A    P+L+A K     LL++P       R   L  DA ++ EL+
Sbjct:  236 PVLLLMGGGMGAGKSTVLKDILQEPFWSEAGGDAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLAWAPFLEQTITMARNVHKHRYRMGVGYKVSEDGTTTEEYWRQETEQNGKQQN-LKPYRIELVGVICDAYLAVVRGIRRALMVKRAVRVRSQLQSHKNFANAFPKYCKLVDDARLYCTNAVAGPPQLIAWKSGNSNLLVDPEEIECLKRVSNLNPDAESINELY 493          
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A833V7H9_9POAL (Zeta toxin n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833V7H9_9POAL)

HSP 1 Score: 202 bits (515), Expect = 1.540e-52
Identity = 117/269 (43.49%), Postives = 158/269 (58.74%), Query Frame = 2
Query: 2756 GDR-PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGYA--PGGRNGEKYWERTAERSPEER----RRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFPSG 3541
            GDR PV+LLMGGGMGAGKS++L++++   FW E G++AV++EAD  K     + A+            A+ VH  ST AA+  L+ A+N G+D+IMDGTL+W  +V+QT+EM R  H  R+R+G GY     G   E YWE   E   EE     R  +PY++E+VG      LAV RGIRR +  GR V V  QLRSH+ FA  F  Y  LVD A L+ T  +   +L+  K EG  LL++P       +   L EDA++V EL+P G
Sbjct:  172 GDRSPVLLLMGGGMGAGKSTVLKDMLKDAFWSEAGANAVLVEADAFKETDVFYRAISSRGHHNDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWEPFVQQTIEMARTIHKQRYRMGIGYKVEEDGSITENYWEPVEEDEDEENAARSRTRKPYRVELVGVVSDAYLAVVRGIRRAITTGRAVRVKSQLRSHKSFANAFPRYCQLVDGARLYCTNTNGSAKLIGVKCEGSELLVDPKEIGCLEKVSALNEDANSVHELYPDG 440          
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: M8ALV9_TRIUA (Zeta_toxin domain-containing protein n=15 Tax=Triticeae TaxID=147389 RepID=M8ALV9_TRIUA)

HSP 1 Score: 202 bits (514), Expect = 1.900e-52
Identity = 119/266 (44.74%), Postives = 159/266 (59.77%), Query Frame = 2
Query: 2756 GDR-PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTA-ERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFPSG 3541
            GDR PV+LLMGGGMGAGKS++++EIV   FW    ++AVV+EAD  K +  ++ A+            A+ VH  ST AA   L+ A+N G+D+IMDGTL+W  +V QTV M RE H  R+R+G GY  A  G   E+YWE    E       R++PY+IE+VG  C   LAV RGIRR ++ GR V V  QLRSH+ FA  F  Y  LVD A L+ T A   P+L+A K  G  LL++        R  ++ E+A+ V EL+ +G
Sbjct:  170 GDRSPVLLLMGGGMGAGKSTVIKEIVKEMFWSGAAANAVVVEADAFKESDVIYQAINSRGHHNDMLQTAELVHQSSTDAAASVLVTALNEGRDVIMDGTLSWEPFVLQTVAMAREVHQQRYRMGAGYKVAADGTTTEQYWEAVEDEEGIGPNCRMKPYRIELVGVICDAYLAVIRGIRRAIICGRAVRVTSQLRSHKRFASAFRRYCELVDNARLYSTNAVGGPKLIAWKDGGSRLLVDVEDIQLLDRVSRINEEANCVHELYQNG 435          
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A2I0WXH8_9ASPA (Zeta_toxin domain-containing protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WXH8_9ASPA)

HSP 1 Score: 203 bits (516), Expect = 2.460e-52
Identity = 118/279 (42.29%), Postives = 167/279 (59.86%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQ-EIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSP---EERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELF------PSGAASAPLAH 3565
            PV+LLMGGGMGAGKS++LQ +++N  FW +  ++AV++EAD  K    ++ A+            A+ VH  S +AA+  L+ A+N G+D+IMDGTL+W  +V QT+ M+R+ HL R+R+GPGY  A  G   E YWE   +      EE    RPY+IE+VG  C   LAV RGIRR +L+GR V V  QLRSH+ FA  F +Y  LVD A L+ T     P+L+  K     LL++P+      +  +L EDA NV+E++      P+   S P+A+
Sbjct:  201 PVLLLMGGGMGAGKSTVLQHKLLNEAFWSKAAANAVIVEADAFKETDVIYRAISSRGHHHDIVQTAELVHQSSMNAASSLLVTALNEGRDVIMDGTLSWEPFVEQTIAMVRDVHLRRYRMGPGYHVAEDGTAIENYWEPVEDDDDNVVEEDGFRRPYRIELVGVICDAYLAVVRGIRRAILMGRAVRVKPQLRSHKRFAAAFPKYCKLVDNARLYCTNTIASPKLIGWKDGDSTLLVDPIEIMWLDKVSELNEDADNVKEIYQCPPASPATVLSTPVAN 479          
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: M4EP42_BRARP (Zeta_toxin domain-containing protein n=3 Tax=Brassica TaxID=3705 RepID=M4EP42_BRARP)

HSP 1 Score: 202 bits (513), Expect = 3.020e-52
Identity = 114/259 (44.02%), Postives = 155/259 (59.85%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGYAPG--GRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELF 3532
            PV+LLMGGGMGAGKS++L++I++  FW E G DAV+IEAD  K    ++ AL            A+ VH  ST AA+  L+ A+N G+D+IMDGTL+W  +V Q + M R  H HR+R+G GY     G   E+YW +       +++ L+PY+IE+VG  C   LAVARGIRR L++ R V V  QL+SH+ FA  F +Y  LVD A L+ T A    PRL+A K     LL++P       R   L  DA ++ EL+
Sbjct:  178 PVLLLMGGGMGAGKSTVLKDILHEPFWSEAGDDAVLIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWEPFVEQMITMARNVHKHRYRMGAGYKVNEDGTTTEEYWRKEETEPHGKQQDLKPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKSQLKSHKSFANAFPKYCELVDNARLYCTNAVGGPPRLIAWKAGNSRLLVDPEDIECLKRVSNLNPDAESIYELY 436          
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A8J5S2M2_ZIZPA (Zeta_toxin domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5S2M2_ZIZPA)

HSP 1 Score: 202 bits (515), Expect = 4.470e-52
Identity = 114/265 (43.02%), Postives = 160/265 (60.38%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGYAPGGRNG---EKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFPSGAAS 3550
            PV+LLMGGGMGAGKS++L+EI++   W +  ++ VV+EAD  K    ++ A+            A+ VH  ST AA+  L+ A+N G+D+I+DGTL+W  +V QTV M R+ H  R+R+GPGY      G   E+YWE     +P    R RPY+IEVVG  C   LAVARGIRR +++GR V V  QL SH+ FA  F  Y  LVD A L+ T++    +L+A K     LL+EP  +    +   L E+A++V +L+P GA +
Sbjct:  223 PVLLLMGGGMGAGKSTVLKEILDEPLWSKEEANTVVVEADAFKETDVIYRAISSMGHHNDMLQTAELVHQSSTDAASSLLVTALNEGRDVILDGTLSWEPFVEQTVAMARDVHRRRYRMGPGYKVDPETGAVTEEYWEPDDAAAPAPMDR-RPYRIEVVGVVCDAYLAVARGIRRAIMVGRAVRVKSQLMSHKRFAAAFQRYIHLVDGARLYSTSSLGSAQLIARKDGNSSLLVEPREFGCLDKVSSLNENATSVHDLYPDGATA 486          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1UIY8_9STRA1.420e-6648.53Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
UPI0018AE0BD43.640e-5444.23uncharacterized protein LOC120277991 n=1 Tax=Diosc... [more]
A0A2G3C6C9_CAPCH3.860e-5342.86Zeta_toxin domain-containing protein n=2 Tax=Solan... [more]
A0A314KKN7_NICAT9.890e-5342.70Zeta_toxin domain-containing protein n=5 Tax=Nicot... [more]
M4DFM7_BRARP1.140e-5244.79Zeta_toxin domain-containing protein n=13 Tax=Bras... [more]
A0A833V7H9_9POAL1.540e-5243.49Zeta toxin n=1 Tax=Carex littledalei TaxID=544730 ... [more]
M8ALV9_TRIUA1.900e-5244.74Zeta_toxin domain-containing protein n=15 Tax=Trit... [more]
A0A2I0WXH8_9ASPA2.460e-5242.29Zeta_toxin domain-containing protein n=1 Tax=Dendr... [more]
M4EP42_BRARP3.020e-5244.02Zeta_toxin domain-containing protein n=3 Tax=Brass... [more]
A0A8J5S2M2_ZIZPA4.470e-5243.02Zeta_toxin domain-containing protein n=1 Tax=Zizan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1614contigP-wetherbeei_contig1614:80..4828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4096.XP_009770369.1
PFAMsZeta_toxin
Model size3716
Max annot lvl35493|Streptophyta
Hectar predicted targeting categorysignal peptide
Exons6
Evalue2.37e-59
EggNOG OGs28HDN@1|root,2QPRV@2759|Eukaryota,37R4U@33090|Viridiplantae,3G8CU@35493|Streptophyta,44BMS@71274|asterids
DescriptionZeta toxin
Cds size1239
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1614.1.2prot_P-wetherbeei_contig1614.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1614 80..1747 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186078.1833541-CDS-P-wetherbeei_contig1614:79..7371683186078.1833541-CDS-P-wetherbeei_contig1614:79..737Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1614 80..737 -
1683186078.1952155-CDS-P-wetherbeei_contig1614:1113..16311683186078.1952155-CDS-P-wetherbeei_contig1614:1113..1631Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1614 1114..1631 -
1683186078.2040658-CDS-P-wetherbeei_contig1614:1684..17471683186078.2040658-CDS-P-wetherbeei_contig1614:1684..1747Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1614 1685..1747 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186078.2128682-UTR-P-wetherbeei_contig1614:1747..30171683186078.2128682-UTR-P-wetherbeei_contig1614:1747..3017Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1614 1748..3017 -
1683186078.2225387-UTR-P-wetherbeei_contig1614:3274..39981683186078.2225387-UTR-P-wetherbeei_contig1614:3274..3998Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1614 3275..3998 -
1683186078.2323134-UTR-P-wetherbeei_contig1614:4205..43361683186078.2323134-UTR-P-wetherbeei_contig1614:4205..4336Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1614 4206..4336 -
1683186078.241671-UTR-P-wetherbeei_contig1614:4477..48281683186078.241671-UTR-P-wetherbeei_contig1614:4477..4828Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1614 4478..4828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1614.1.2

>prot_P-wetherbeei_contig1614.1.2 ID=prot_P-wetherbeei_contig1614.1.2|Name=mRNA_P-wetherbeei_contig1614.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=413bp
MAMVTATAVGAAAAAAAAAGANGSWGTNGHSFSNGPRHGLGGCYGAPHHR
GGAHHHHHGGGGNGGDAAGGNAGGATVGGGPRRHPLERRREVFGDRPVVL
LMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRK
AELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQ
TVEMIREAHLHRHRIGPGYAPGGRNGEKYWERTAERSPEERRRLRPYKIE
VVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVD
EASLFDTTADDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEE
LFPSGAASAPLAHGSGSGARGGGGGGGRGGGLGGFGGPGGGSGAAGVPLG
GYDGDGAAAAAAA
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mRNA from alignment at P-wetherbeei_contig1614:80..4828-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1614.1.2 ID=mRNA_P-wetherbeei_contig1614.1.2|Name=mRNA_P-wetherbeei_contig1614.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4749bp|location=Sequence derived from alignment at P-wetherbeei_contig1614:80..4828- (Phaeothamnion wetherbeei SAG_119_79)
GGAAACATCGCGCCCGGCCAACTCCCCGCAGATGAGGTCAACGAACGCGT CTCCACTCCCCGGTTGAGCGATAAGGACGTCATGGAGCTGGAGCCTTTGC GAGAAGGGAAATTGCGGGAGAGGCGCCTCTCGAGCAATGCTACTGAACGA GAATCCACCGTCGAGTATCAAGCACCATGGGCAAGAGCAATCAACGGTGG CTGCTGCCAAGGCTTCCTCTGGACGCGATCTCACCTCGCACGCTCTTCCT GGCGGAAGAGGTTCGCGGCGCTCGATTCGGGCAGCGAATTTTTGCGGCTA TTTGAGTGCGATGCTGCGCAGGAGACCGGAAAGATGGTACTTCAGGGCGA GGTGAGATTGATCTTCGCGCTTGTGCCCCCGCCCTCCGTCAGGCTTTTCG TAGGGATGAGAGCAGATTCCCTTCACCCCTGACCTACACCTGCACCACTT CACGCTAACCCATCGCCGCCATTCTTCGCCCCGTTTCTTTAGGCGCAAAT CGTGGGAATCACGATCCGCTCGGACCTCTCTGGCGGGGCCGATCACCGAT ATGTTATAGAAATTGCGACGCCTGTGGGAGGTCGCCTTTGGGCAAGTGTC CCGGGACTTCAAGATCTCCGAAGGTGGGCAGCCCTGGTTCGTCAAGTTTT TGTGATGCCTTGCACGGAATGGCTGGCAGGTGCATTTCGACTTCGAGACG GCCCCCTTACTAGTGGTAAACTGTCTTCATGGATATTGCTTCAGATCTCT GTTGGCTTTTTACCTGTCGCATTAAAAAGTCTTCCCCATCTTCTCTACAA ATTTCGGACAATACTCTCCTTTGCCGGCAGATGGGCAGCGGCGCTGCTTG AGGCCATGTGCGTGCGTCAACGTCGGCTGGCAGCGGCAGCCACTTCGGAC TCCCACAAAGCGGGCACCGACTTCCGAATTGCTGGAGGAGGCAGTATCGT CGGGGCTGGCGGCAATAGCAATTCTTTGGCTGCTGGCTCCCAGAGCAGGG ATCATCGCATTAGCAGCGGCTGCGGTGGCGATGCCGGCGGCGGCGGCGGC GATAGTGGCGGCATGTCTGAGCCACTCATGGCGGACGGCCCGGGCATGCA GGCGCTCAGCCTGGCGTTGCGAGTGGTTCCCGGGCGCTGGCACTCGACCC GGGCCTTACGGGAGCTGCGGCGGCGCCTTCGGCGGCACCAGCTCGTTGAC TATCACTACAAGGCGGGACCCAGCCGCAGCAGCAGCCTGGGTGTTGATGG CGGCGGCGGGGGCGGCGGCGGCAACGGCCGCCGCTGCCTGCAGGTCTTCC GGCGCGATGGCGACGATGAGCGGCAGCGGCTGCGGCGCCGCAAGAGCATC GAGCTCGTGGCGCTCGTCCGCGAGGAGCGTATGCGCTGCAAGACGCCCAT CCTGTCCTTTGCGGACTTTTGCTGCTTCCAGCTGCTGCTGGCGGACAGCC CGCTGGAGGCACCGCTGCGGGCGGCTGCGGCGCTGCTGCTGCACGACCCC GTCGCGGCGCGGCCTTCGGCCGACCAGCTGGGAAGCGACGAGCTCATGGA GCTGGTGAGTGAAGTGGAGAGCCAGCTGAAGTCGCTCTGGTAGTCGAGAT TCGATGGTGTCTTTCGATTGAAGGAGCACTTATGCGGTTGAAAAAGTAGA TAGGAAACGCGTCAAAGGTGCAATTATTCGATGCCGATTGGCGTCATGGC AGGGAAATATGGACACGATTCTTTCAGCACTAAGACTGCTGTAGAAGCGC TAATATCCTTTGCTTTCTGCACCCAACCTTCACGCTGTTGATTGGTTGCT TGGCTCTCCAGGTTCATGACCTCTGGGTGGAGGCGACGAGGCGAAGCGTC GCCAACAGCCCGGTGATGGCCGCGCGCGAGGCCGGCAAAGAGATTGCCAG GGCGAAAGCAGCGGCATCGGAGCTGTCTCTTTCTGGCGAGAGCTTTGACA GAGCCTGCATCGGCGGCTCCTCCAAGCCGCTCCTGCCGGCTGCGCCGACG CTGCCGGAGGTTGTCTCTCCCGCACGGACCGTGATACCGCCATCGCCGCC GTCACCGTCACCGCAGCAGCTGCAGCCGAAGAACGGGAAGCTGCTCGGCT GGCGTCTTTTCGGACCAGAGGCAGGGCCGACGCCGGAGCGAGTGCCCGAG CCGAAAGGGGCTGCCGTGGACGACGCCATCTTTGAGATCGACCCCGCGGC AGACCAGCAAGCGCCTCTTGCAGGGCCGTCTGGCGCTGCTGTCAGCGCCG GGTCTGCGAAGAGCCGAGGCGGCGAGGCGGGAGGGGAGCCCCCGGCAATT TGGGCGTTTGAAGATTTTGCTGGCGGTGCTGATGGACGTCGCCAGAATGA CGGCGGCGGCAGCAGTGGCGGCGGCCTTATGCACACGCCGTCGCGGTTCC CGCGTTTTGCCCGTGAGCTGCTCGCGATTATGAACCGTCTGGCGATCCTC TACCTGAGCTACCGTTGGGACGACGTAGCCGCCCTGATCAAGGCGAACCC GCCGCCTGCGGCCATTAGGGGCGCGGCCGAGGACGGGAACCGCCCGTCGG CGGTCGCGGCAGAGGCTGCGGAGGTGGCGGCAGCGGCAGCAGCGGCGGCA GAGATGGAGGCGGTGTTTGCCGGCGCAGGGATCGAGCCGCCGTCACCAGC GGCAGGAGCGGCGGCGGCGGCGGTAGCAGCTGCGGCGGCTGCATCCGGAG ACGAGGGCGGCCTGCGAACGACTTCCATGTCGGATGCGGAAGCGGACACC GCTGGTGTCAGCGGTCTCTCCGCGTTGGGGCCAATCACGCGGTGGCAGAG CTTCGACCACAAGTGGGCGGCGATGCCGCCGCCGACACGGCTGGGGTTGG CGGCGCCGGCAGGCGGCGGCGGTGGTGGTGCCTGGCCAGCAGCGAAGCGG CGGTCGTTCCGGCGGCGGGTGAACAACCTGCTGGTGGGGCAGCGGACGTT TCAAACTCTTGGAAGCCTGTTGAAGCTCGAGCAAGAAGAGCAGGAGCGAC AGAGGCAGCGTTTCGCGGAGGCGGAGGCGGCGAGACGGCGTTCCCGCGGC GCGATCCTCAGTCGAAGCGTCGGCCACGGCTATGGCCATGGTCACGGCGA CGGCGGTGGGGGCAGCGGCGGCAGCGGCGGCGGCAGCGGGGGCAGCGGCA GCGACGATGGGCGTGGCAGCAAGGGCGGCAGCGACTACGGTAGCGAGAAC GGCAGCTGGGGCACGAACGGACATTCGTTTTCCAACGGCCCCCGCCATGG TCTCGGGGGCTGTTACGGTGCTCCCCACCACCGCGGCGGCGCCCACCACC ATCACCACGGCGGCGGCGGCAACGGCGGTGACGCCGCTGGCGGCAATGCT GGCGGTGCCACGGTTGGCGGCGGTCCACGCCGGCACCCACTGGAGCGGCG GCGAGAAGTCTTCGGCGACCGCCCCGTCGTTCTCCTGATGGGCGGCGGCA TGGGCGCCGGCAAGAGCTCGCTGCTGCAGGAGATCGTCAACAGCCGCTTC TGGCGCGAGTTCGGCAGCGACGCTGTTGTCATCGAGGCTGACCGCATCAA GATGGCTGCGCCCGTGTTTCTGGCGCTGCGCAAGGCGGAGCTGACGGGCG GCGACCCGGGGCTGGCGCAGTACGTGCACGACTTTTCGACGAGCGCCGCC AACGAGGCGCTGCTGGCCGCCGTCAACCATGGCCAGGACATCATCATGGA CGGCACCCTCGCCTGGTCGGTTTCGGTGGCGTTCCTTCGGGTTGGAGTTT GCGCGTAGAGCCGCCTGTTTGGGTTCTGGTCCAACCGATGTCGGGTTCCG GTGTTGCGTGCTGTGGGGTTTGAGGTGCCCTCCGTCCCAGTTTGCGGGTG GTTGGGCTTGCCTGTTGGCAGTTCTTTCCAGACGGTGGAAGCAGGCTTCT TTTCCTCGTGGACTTTAAAGATGCCATGATGACTGTTGCCACTTTCACAC TTCGAAATGCAGGGGCAGTGTAGTCTACCTCTCTGGTCCTCTTTTGCAAC CTGTTCTCCACCTCTTGCAGTAAATCCATACTCTAATGTTTTCTGCCATT TTTTTCTCCCTTCCTCTTCCTGTTCAACGATCAATCCGTAGGGCCGAGTA CGTGCGGCAGACCGTCGAGATGATCCGCGAGGCCCACCTGCACCGCCACC GCATCGGCCCGGGCTACGCGCCCGGCGGCCGCAATGGCGAGAAGTACTGG GAGCGGACGGCGGAGCGCTCCCCGGAGGAGCGGCGGCGGCTCCGCCCTTA CAAAATCGAAGTCGTTGGCGCGACGTGCCCGCCCGAACTGGCGGTGGCGC GCGGCATCCGGCGCAAGCTGCTGATTGGCCGCGGCGTGCCGGTGGCGCAG CAGCTGCGCAGCCACCGCCTGTTCGCCGAGCACTTTGCGGAGTACGCGGC GCTCGTAGATGAGGCCAGCCTTTTCGACACGACGGCGGACGACCGGCCGC GGCTGCTGGCGCACAAGGTTGAGGGCCGGCCGCTGCTGCTTGAACCGCTG CCGTACGCCGACTTCTACCGCCGCCGGCAGCTGCGCGAGGACGCCAGCAA CGTCGAAGAGCTCTTCCCGTCGGGAGCGGCGTCGGCGCCGCTGGCCCACG GCAGCGGCAGCGGGGCTCGCGGCGGCGGCGGTGGCGGCGGCCGCGGCGGA GGCCTGGGCGGCTTTGGCGGCCCGGGCGGCGGCAGCGGCGCTGCTGGCGT GCCACTCGGCGGATATGACGGCGACGGGGCAGCTGCGGCGGCTGCGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1614:80..4828-

>mRNA_P-wetherbeei_contig1614.1.2 ID=mRNA_P-wetherbeei_contig1614.1.2|Name=mRNA_P-wetherbeei_contig1614.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1239bp|location=Sequence derived from alignment at P-wetherbeei_contig1614:80..4828- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCATGGTCACGGCGACGGCGGTGGGGGCAGCGGCGGCAGCGGCGGC
GGCAGCGGGGGCAAACGGCAGCTGGGGCACGAACGGACATTCGTTTTCCA
ACGGCCCCCGCCATGGTCTCGGGGGCTGTTACGGTGCTCCCCACCACCGC
GGCGGCGCCCACCACCATCACCACGGCGGCGGCGGCAACGGCGGTGACGC
CGCTGGCGGCAATGCTGGCGGTGCCACGGTTGGCGGCGGTCCACGCCGGC
ACCCACTGGAGCGGCGGCGAGAAGTCTTCGGCGACCGCCCCGTCGTTCTC
CTGATGGGCGGCGGCATGGGCGCCGGCAAGAGCTCGCTGCTGCAGGAGAT
CGTCAACAGCCGCTTCTGGCGCGAGTTCGGCAGCGACGCTGTTGTCATCG
AGGCTGACCGCATCAAGATGGCTGCGCCCGTGTTTCTGGCGCTGCGCAAG
GCGGAGCTGACGGGCGGCGACCCGGGGCTGGCGCAGTACGTGCACGACTT
TTCGACGAGCGCCGCCAACGAGGCGCTGCTGGCCGCCGTCAACCATGGCC
AGGACATCATCATGGACGGCACCCTCGCCTGGGCCGAGTACGTGCGGCAG
ACCGTCGAGATGATCCGCGAGGCCCACCTGCACCGCCACCGCATCGGCCC
GGGCTACGCGCCCGGCGGCCGCAATGGCGAGAAGTACTGGGAGCGGACGG
CGGAGCGCTCCCCGGAGGAGCGGCGGCGGCTCCGCCCTTACAAAATCGAA
GTCGTTGGCGCGACGTGCCCGCCCGAACTGGCGGTGGCGCGCGGCATCCG
GCGCAAGCTGCTGATTGGCCGCGGCGTGCCGGTGGCGCAGCAGCTGCGCA
GCCACCGCCTGTTCGCCGAGCACTTTGCGGAGTACGCGGCGCTCGTAGAT
GAGGCCAGCCTTTTCGACACGACGGCGGACGACCGGCCGCGGCTGCTGGC
GCACAAGGTTGAGGGCCGGCCGCTGCTGCTTGAACCGCTGCCGTACGCCG
ACTTCTACCGCCGCCGGCAGCTGCGCGAGGACGCCAGCAACGTCGAAGAG
CTCTTCCCGTCGGGAGCGGCGTCGGCGCCGCTGGCCCACGGCAGCGGCAG
CGGGGCTCGCGGCGGCGGCGGTGGCGGCGGCCGCGGCGGAGGCCTGGGCG
GCTTTGGCGGCCCGGGCGGCGGCAGCGGCGCTGCTGGCGTGCCACTCGGC
GGATATGACGGCGACGGGGCAGCTGCGGCGGCTGCGGCG
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