mRNA_P-wetherbeei_contig1614.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A7S1UIY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIY8_9STRA) HSP 1 Score: 242 bits (617), Expect = 1.420e-66 Identity = 132/272 (48.53%), Postives = 182/272 (66.91%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLAL-RKAELTGGDPG---LAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGYAPGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEG--RPLLLEPLPYADFYRRRQLREDASNVEELFPSGAASAPLA 3562
PVVL +GGGMGAGKSS+L+E+ N WR ++AV+IEAD+IKM P+F L +K E G G LA +VH+FSTSAAN+ LLAAV G+D+IMDGTL W EYVRQT+ M++ AH + +RIGPGY GG + E+YWE E +E+ R Y++ VVG C P LAV+RG+RRKLL RGVP+ QLRSH+LF+E+F +Y +VD A+L+DT+ +P L+A K G + L+ P + F + + + A++ +L+ + LA
Sbjct: 18 PVVLFLGGGMGAGKSSILKEVNNQPPWRGLLANAVIIEADKIKMFDPIFNHLAKKEEADRGRAGVGELASFVHNFSTSAANKMLLAAVRSGRDVIMDGTLTWYEYVRQTINMVKNAHRYEYRIGPGYVEGG-SVERYWEAMNELCLDEQERRMQYEVHVVGVCCEPHLAVSRGLRRKLLTRRGVPILSQLRSHKLFSENFCKYVRMVDRAALYDTSDFGKPTLIARKGGGLGKTFLVLPERFLAFVKFKDMNIKANSYLDLYQQTSVEGGLA 288
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: UPI0018AE0BD4 (uncharacterized protein LOC120277991 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE0BD4) HSP 1 Score: 208 bits (530), Expect = 3.640e-54 Identity = 115/260 (44.23%), Postives = 157/260 (60.38%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFP 3535
PV+LLMGGGMGAGKS++L++I+ FW ++AVV+EAD K ++ AL A+ VH ST AA+ L+ A+N G+D+IMDGTL+W +V QT+ M+R H R+R+G GY A G E YWE E + +E + RPY+IE+VG C LAV RGIRR +L+GR V V QL+SH+ FA F Y LVD A L+ + + P+L+A K LL+EP Y +L EDA +V E++P
Sbjct: 218 PVLLLMGGGMGAGKSTVLKDILKEAFWSGAAANAVVVEADAFKETDVIYRALSSRGHHNDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWEPFVEQTIAMVRAIHRRRYRMGVGYKVADDGSVMENYWEPAEEENNDENNKRRPYRIELVGVVCDAYLAVVRGIRRAILMGRAVRVKSQLKSHKRFANAFPRYCQLVDHARLYSSNSMGTAPKLIAWKDGDSSLLIEPQEYTCLENVAKLNEDADSVHEVYP 477
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A2G3C6C9_CAPCH (Zeta_toxin domain-containing protein n=2 Tax=Solanoideae TaxID=424551 RepID=A0A2G3C6C9_CAPCH) HSP 1 Score: 199 bits (507), Expect = 3.860e-53 Identity = 111/259 (42.86%), Postives = 154/259 (59.46%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELF 3532
PV+LLMGGGMGAGKS++L++I+ FW E +AVV+EAD K ++ AL A+ VH ST AA+ L+ A+N G+D+IMDGTL+W +V QT+ M R H HR+R+G GY A G E YWE+ + + +PY+IE+VG C P LAV RGIRR + GR V V QL SH+ FA F +Y LVD A L+ T A +P L+A K +L+EP ++++E+A ++ EL+
Sbjct: 30 PVLLLMGGGMGAGKSTVLKDILKQSFWSEAAGNAVVVEADAFKETDVIYRALSSRGHHNDMLQTAELVHQNSTDAASSLLVTALNEGRDVIMDGTLSWEPFVEQTIAMARNVHQHRYRMGEGYKVAEDGTVTENYWEQIEQGEESANKMSKPYRIELVGVVCDPYLAVVRGIRRAIATGRAVRVKSQLTSHKRFANAFPKYCNLVDNARLYCTNALGSKPSLIAWKDGESKMLVEPEDIKCLEMVKKVKEEAESIYELY 288
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A314KKN7_NICAT (Zeta_toxin domain-containing protein n=5 Tax=Nicotiana TaxID=4085 RepID=A0A314KKN7_NICAT) HSP 1 Score: 204 bits (520), Expect = 9.890e-53 Identity = 114/267 (42.70%), Postives = 157/267 (58.80%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFPSGAASAP 3556
PV+LLMGGGMGAGKS++L++I+ FW E ++AVV+EAD K ++ AL A+ VH ST AA+ L+ A+N G+D+IMDGTL+W +V QT+ M R H HR+R+G GY A G E YWE+ + EE +PY+IE+VG C P LAV RGIRR + GR V V QL+SH+ FA F +Y +VD A L+ T +P L+A K +L+EP R + E+A ++ EL+P + P
Sbjct: 223 PVLLLMGGGMGAGKSTVLKDILKQSFWSEAAANAVVVEADAFKETDVIYRALSSRGHHHDMLQTAELVHQNSTDAASSLLVTALNEGRDVIMDGTLSWVPFVEQTIAMARNVHKHRYRMGEGYKVAEDGTVTENYWEQAEQEQGEEANITKPYRIELVGVVCDPYLAVVRGIRRAIGTGRAVRVKPQLKSHKRFANAFPKYCDIVDNARLYCTNVLGSKPTLIAWKDGENKMLVEPEDIKCLEMVRNVNEEAESIYELYPKDELAQP 489
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: M4DFM7_BRARP (Zeta_toxin domain-containing protein n=13 Tax=Brassiceae TaxID=981071 RepID=M4DFM7_BRARP) HSP 1 Score: 204 bits (520), Expect = 1.140e-52 Identity = 116/259 (44.79%), Postives = 160/259 (61.78%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELF 3532
PV+LLMGGGMGAGKS++L++I+ FW E G DAVVIEAD K ++ AL A+ VH ST AA+ L+ A+N G+D+IMDGTLAWA ++ QT+ M R H HR+R+G GY + G E+YW + E++ +++ L+PY+IE+VG C LAV RGIRR L++ R V V QL+SH+ FA F +Y LVD+A L+ T A P+L+A K LL++P R L DA ++ EL+
Sbjct: 236 PVLLLMGGGMGAGKSTVLKDILQEPFWSEAGGDAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLAWAPFLEQTITMARNVHKHRYRMGVGYKVSEDGTTTEEYWRQETEQNGKQQN-LKPYRIELVGVICDAYLAVVRGIRRALMVKRAVRVRSQLQSHKNFANAFPKYCKLVDDARLYCTNAVAGPPQLIAWKSGNSNLLVDPEEIECLKRVSNLNPDAESINELY 493
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A833V7H9_9POAL (Zeta toxin n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833V7H9_9POAL) HSP 1 Score: 202 bits (515), Expect = 1.540e-52 Identity = 117/269 (43.49%), Postives = 158/269 (58.74%), Query Frame = 2
Query: 2756 GDR-PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGYA--PGGRNGEKYWERTAERSPEER----RRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFPSG 3541
GDR PV+LLMGGGMGAGKS++L++++ FW E G++AV++EAD K + A+ A+ VH ST AA+ L+ A+N G+D+IMDGTL+W +V+QT+EM R H R+R+G GY G E YWE E EE R +PY++E+VG LAV RGIRR + GR V V QLRSH+ FA F Y LVD A L+ T + +L+ K EG LL++P + L EDA++V EL+P G
Sbjct: 172 GDRSPVLLLMGGGMGAGKSTVLKDMLKDAFWSEAGANAVLVEADAFKETDVFYRAISSRGHHNDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWEPFVQQTIEMARTIHKQRYRMGIGYKVEEDGSITENYWEPVEEDEDEENAARSRTRKPYRVELVGVVSDAYLAVVRGIRRAITTGRAVRVKSQLRSHKSFANAFPRYCQLVDGARLYCTNTNGSAKLIGVKCEGSELLVDPKEIGCLEKVSALNEDANSVHELYPDG 440
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: M8ALV9_TRIUA (Zeta_toxin domain-containing protein n=15 Tax=Triticeae TaxID=147389 RepID=M8ALV9_TRIUA) HSP 1 Score: 202 bits (514), Expect = 1.900e-52 Identity = 119/266 (44.74%), Postives = 159/266 (59.77%), Query Frame = 2
Query: 2756 GDR-PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTA-ERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFPSG 3541
GDR PV+LLMGGGMGAGKS++++EIV FW ++AVV+EAD K + ++ A+ A+ VH ST AA L+ A+N G+D+IMDGTL+W +V QTV M RE H R+R+G GY A G E+YWE E R++PY+IE+VG C LAV RGIRR ++ GR V V QLRSH+ FA F Y LVD A L+ T A P+L+A K G LL++ R ++ E+A+ V EL+ +G
Sbjct: 170 GDRSPVLLLMGGGMGAGKSTVIKEIVKEMFWSGAAANAVVVEADAFKESDVIYQAINSRGHHNDMLQTAELVHQSSTDAAASVLVTALNEGRDVIMDGTLSWEPFVLQTVAMAREVHQQRYRMGAGYKVAADGTTTEQYWEAVEDEEGIGPNCRMKPYRIELVGVICDAYLAVIRGIRRAIICGRAVRVTSQLRSHKRFASAFRRYCELVDNARLYSTNAVGGPKLIAWKDGGSRLLVDVEDIQLLDRVSRINEEANCVHELYQNG 435
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A2I0WXH8_9ASPA (Zeta_toxin domain-containing protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WXH8_9ASPA) HSP 1 Score: 203 bits (516), Expect = 2.460e-52 Identity = 118/279 (42.29%), Postives = 167/279 (59.86%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQ-EIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGY--APGGRNGEKYWERTAERSP---EERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELF------PSGAASAPLAH 3565
PV+LLMGGGMGAGKS++LQ +++N FW + ++AV++EAD K ++ A+ A+ VH S +AA+ L+ A+N G+D+IMDGTL+W +V QT+ M+R+ HL R+R+GPGY A G E YWE + EE RPY+IE+VG C LAV RGIRR +L+GR V V QLRSH+ FA F +Y LVD A L+ T P+L+ K LL++P+ + +L EDA NV+E++ P+ S P+A+
Sbjct: 201 PVLLLMGGGMGAGKSTVLQHKLLNEAFWSKAAANAVIVEADAFKETDVIYRAISSRGHHHDIVQTAELVHQSSMNAASSLLVTALNEGRDVIMDGTLSWEPFVEQTIAMVRDVHLRRYRMGPGYHVAEDGTAIENYWEPVEDDDDNVVEEDGFRRPYRIELVGVICDAYLAVVRGIRRAILMGRAVRVKPQLRSHKRFAAAFPKYCKLVDNARLYCTNTIASPKLIGWKDGDSTLLVDPIEIMWLDKVSELNEDADNVKEIYQCPPASPATVLSTPVAN 479
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: M4EP42_BRARP (Zeta_toxin domain-containing protein n=3 Tax=Brassica TaxID=3705 RepID=M4EP42_BRARP) HSP 1 Score: 202 bits (513), Expect = 3.020e-52 Identity = 114/259 (44.02%), Postives = 155/259 (59.85%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGYAPG--GRNGEKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTA-DDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELF 3532
PV+LLMGGGMGAGKS++L++I++ FW E G DAV+IEAD K ++ AL A+ VH ST AA+ L+ A+N G+D+IMDGTL+W +V Q + M R H HR+R+G GY G E+YW + +++ L+PY+IE+VG C LAVARGIRR L++ R V V QL+SH+ FA F +Y LVD A L+ T A PRL+A K LL++P R L DA ++ EL+
Sbjct: 178 PVLLLMGGGMGAGKSTVLKDILHEPFWSEAGDDAVLIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWEPFVEQMITMARNVHKHRYRMGAGYKVNEDGTTTEEYWRKEETEPHGKQQDLKPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKSQLKSHKSFANAFPKYCELVDNARLYCTNAVGGPPRLIAWKAGNSRLLVDPEDIECLKRVSNLNPDAESIYELY 436
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Match: A0A8J5S2M2_ZIZPA (Zeta_toxin domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5S2M2_ZIZPA) HSP 1 Score: 202 bits (515), Expect = 4.470e-52 Identity = 114/265 (43.02%), Postives = 160/265 (60.38%), Query Frame = 2
Query: 2765 PVVLLMGGGMGAGKSSLLQEIVNSRFWREFGSDAVVIEADRIKMAAPVFLALRKAELTGGDPGLAQYVHDFSTSAANEALLAAVNHGQDIIMDGTLAWAEYVRQTVEMIREAHLHRHRIGPGYAPGGRNG---EKYWERTAERSPEERRRLRPYKIEVVGATCPPELAVARGIRRKLLIGRGVPVAQQLRSHRLFAEHFAEYAALVDEASLFDTTADDRPRLLAHKVEGRPLLLEPLPYADFYRRRQLREDASNVEELFPSGAAS 3550
PV+LLMGGGMGAGKS++L+EI++ W + ++ VV+EAD K ++ A+ A+ VH ST AA+ L+ A+N G+D+I+DGTL+W +V QTV M R+ H R+R+GPGY G E+YWE +P R RPY+IEVVG C LAVARGIRR +++GR V V QL SH+ FA F Y LVD A L+ T++ +L+A K LL+EP + + L E+A++V +L+P GA +
Sbjct: 223 PVLLLMGGGMGAGKSTVLKEILDEPLWSKEEANTVVVEADAFKETDVIYRAISSMGHHNDMLQTAELVHQSSTDAASSLLVTALNEGRDVILDGTLSWEPFVEQTVAMARDVHRRRYRMGPGYKVDPETGAVTEEYWEPDDAAAPAPMDR-RPYRIEVVGVVCDAYLAVARGIRRAIMVGRAVRVKSQLMSHKRFAAAFQRYIHLVDGARLYSTSSLGSAQLIARKDGNSSLLVEPREFGCLDKVSSLNENATSVHDLYPDGATA 486 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1614.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1614.1.2 >prot_P-wetherbeei_contig1614.1.2 ID=prot_P-wetherbeei_contig1614.1.2|Name=mRNA_P-wetherbeei_contig1614.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=413bp MAMVTATAVGAAAAAAAAAGANGSWGTNGHSFSNGPRHGLGGCYGAPHHRback to top mRNA from alignment at P-wetherbeei_contig1614:80..4828- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1614.1.2 ID=mRNA_P-wetherbeei_contig1614.1.2|Name=mRNA_P-wetherbeei_contig1614.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4749bp|location=Sequence derived from alignment at P-wetherbeei_contig1614:80..4828- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1614:80..4828- >mRNA_P-wetherbeei_contig1614.1.2 ID=mRNA_P-wetherbeei_contig1614.1.2|Name=mRNA_P-wetherbeei_contig1614.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1239bp|location=Sequence derived from alignment at P-wetherbeei_contig1614:80..4828- (Phaeothamnion wetherbeei SAG_119_79)back to top |