mRNA_P-wetherbeei_contig15943.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: A0A127ES88_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ES88_9HYPH) HSP 1 Score: 167 bits (424), Expect = 1.890e-50 Identity = 92/148 (62.16%), Postives = 112/148 (75.68%), Query Frame = 1
Query: 34 AAALAASVSLASAQS-RVEVGVLECTGTSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELRAGR 474
A AL A+ + A AQS RVEVGV+EC G++TSF++GSVTELGC F+ S P EPY ATIRR G+DIG V+AWAV APTR I DL G Y G SA+AT+G+G+GAN LVGGSN+T ALQP S QAQTGLS+AAG++ ++L GR
Sbjct: 10 ATALVATATTAMAQSSRVEVGVIECRGSTTSFVVGSVTELGCVFRASDNSPPEPYHATIRRAGVDIGFPQQVVVAWAVMAPTRGIQRGDLRGTYVGASASATVGLGVGANGLVGGSNNTFALQPLSGQAQTGLSVAAGVASMDLMPGR 157
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: A0A1M7TA58_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium erythrophlei TaxID=1437360 RepID=A0A1M7TA58_9BRAD) HSP 1 Score: 165 bits (417), Expect = 2.260e-49 Identity = 92/150 (61.33%), Postives = 113/150 (75.33%), Query Frame = 1
Query: 28 VSAAALAASVSLASAQSRVEVGVLECTG-TSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELRAGR 474
V+AAAL AS+ A+AQ RV+VGVLEC G S FI+GSVT LGC + G P + Y ATIR+VG+D+GI + T +AW VFAPTRQ+GP D++GNY G +ATIGVG G N LVGGSN++IALQP S+Q Q GLS+AAG+ LELR GR
Sbjct: 10 VAAAALTASLGGANAQERVQVGVLECRGGASIGFIVGSVTNLGCVLR-IDGVPEDRYVATIRKVGVDLGITSETALAWGVFAPTRQLGPGDISGNYAGAQGSATIGVGAGGNVLVGGSNNSIALQPLSLQGQVGLSVAAGLESLELRPGR 158
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: A0A1Q3W4V6_9BRAD (Uncharacterized protein n=1 Tax=Afipia sp. 64-13 TaxID=1895701 RepID=A0A1Q3W4V6_9BRAD) HSP 1 Score: 160 bits (405), Expect = 1.500e-47 Identity = 85/149 (57.05%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 31 SAAALAASVSLASAQSRVEVGVLECTG-TSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELRAGR 474
SAA L ASV+L AQ RV+ G LEC G +S ++GSVT LGC F+ S G P + Y AT++++GLD+GI + ++W V APT Q+GP DL+GNY GV+A+A +GVGLGANA++GGS ++ ALQP SVQ QTGL++AAG+ LELR GR
Sbjct: 11 SAALLVASVTLTQAQDRVQAGTLECRGGSSVGMVVGSVTNLGCVFR-SQGRPDDLYVATVKKIGLDLGITEASALSWIVLAPTAQLGPGDLSGNYAGVNASAAVGVGLGANAMIGGSANSFALQPLSVQGQTGLNVAAGVQSLELRPGR 158
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: UPI0017A30997 (DUF992 domain-containing protein n=1 Tax=Rhodopseudomonas sp. TaxID=1078 RepID=UPI0017A30997) HSP 1 Score: 159 bits (403), Expect = 2.920e-47 Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 1
Query: 19 IGFVSAAALAASVSLASAQSRVEVGVLECTG-TSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELRAGR 474
+GF +AA +A + + QSRV++GVLEC G S FI+GSVT LGC + S G P PY ATIR+VGLD+GI T +AWAVFAP + GP DLAGNY G +A++GVGLGAN LVGGS ++IALQP S+Q QTGL++A G+ LELR GR
Sbjct: 8 LGFAAAALIAGAAQ--AQQSRVQLGVLECRGGASVGFIVGSVTNLGCVLR-SDGRPDAPYVATIRKVGLDLGITQETALAWAVFAPVERFGPGDLAGNYAGAQGSASVGVGLGANVLVGGSQNSIALQPLSLQGQTGLNVALGLEDLELRPGR 157
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: A0A127F1S5_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F1S5_9HYPH) HSP 1 Score: 160 bits (404), Expect = 3.080e-47 Identity = 93/157 (59.24%), Postives = 118/157 (75.16%), Query Frame = 1
Query: 7 MRLSIGFVSAAALAASVSLASAQSRVEVGVLECTGTSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELR-AGR 474
MR+ G AAALAAS S A AQ+ VE G LEC G + +F++GS+T+L C F+P+ G P + Y TIRR GLDIG ++TV+ W V+APT ++GP LAG+YGG +A+ T GVG+GANAL GGSNSTI+LQP SVQ QTGLS AAGI+G++L AGR
Sbjct: 1 MRVFAGLAVAAALAASSSQALAQNAVEAGYLECRGQTQAFVVGSITKLECLFRPTFGRP-QAYLGTIRRAGLDIGWTDSTVLHWQVYAPTNRLGPYALAGSYGGGAASVTFGVGVGANALWGGSNSTISLQPLSVQGQTGLSAAAGIAGMDLEPAGR 156
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: A0A0D7PZ10_9BRAD (Uncharacterized protein n=7 Tax=Bradyrhizobium TaxID=374 RepID=A0A0D7PZ10_9BRAD) HSP 1 Score: 157 bits (397), Expect = 2.530e-46 Identity = 90/148 (60.81%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 37 AALAASVSLASAQSR-VEVGVLECTG-TSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELRAGR 474
A+L ASV+ ASAQSR V+VGVLEC G S F++GSVT LGC + G P + Y ATIR+VGLD+GI T +AW VFAP ++GP DL+GNY G +A+IGVGLG N LVGGSN++IALQP SVQ Q GL++AAG+ LELR GR
Sbjct: 13 ASLVASVAGASAQSRLVQVGVLECRGGASIGFVVGSVTNLGCVLRVD-GVPDDRYVATIRKVGLDLGITQETALAWGVFAPVNRLGPGDLSGNYAGAQGSASIGVGLGGNVLVGGSNNSIALQPLSVQGQVGLNVAAGLESLELRPGR 159
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: A0A533J2X4_9BRAD (DUF992 domain-containing protein n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A533J2X4_9BRAD) HSP 1 Score: 157 bits (396), Expect = 3.480e-46 Identity = 88/149 (59.06%), Postives = 113/149 (75.84%), Query Frame = 1
Query: 34 AAALAASVSLASAQ-SRVEVGVLECTG-TSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELRAGR 474
A AL+ASV+ ASAQ ++V+VGVLEC G S FI+GSVT LGC + ++G P + Y AT+R+VGLD+GI + +AW VFAP ++GP DL+GNY G +AT+GVG+G N LVGGSN++IALQP SVQ Q G+SIAAG+ LELR GR
Sbjct: 11 ALALSASVTTASAQQAKVQVGVLECRGGASVGFIVGSVTNLGCVLR-AAGQPDDFYVATVRKVGLDLGITQESALAWGVFAPVNRLGPGDLSGNYAGAQGSATLGVGVGGNVLVGGSNNSIALQPLSVQGQVGVSIAAGLESLELRPGR 158
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: A0A318T8F9_9BRAD (Uncharacterized protein DUF992 n=1 Tax=Rhodopseudomonas faecalis TaxID=99655 RepID=A0A318T8F9_9BRAD) HSP 1 Score: 156 bits (395), Expect = 4.790e-46 Identity = 89/150 (59.33%), Postives = 110/150 (73.33%), Query Frame = 1
Query: 28 VSAAALAASVSLASAQSRVEVGVLECTG-TSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELRAGR 474
++AAALA S + QSRV++GVLEC G S FI+GSVT LGC + S G P EPY ATIR+VGLDIGI T +AWAVFAP ++GP LAGNY G +A +GVG+GAN LVGGS++ I+LQP S+Q QTG ++A G+ GLELR GR
Sbjct: 10 IAAAALAIG-SAEAQQSRVKIGVLECRGGASVGFIVGSVTHLGCLLR-SEGRPDEPYVATIRKVGLDIGITQETGLAWAVFAPVERLGPGALAGNYAGAQGSAAVGVGVGANVLVGGSDNVISLQPLSLQGQTGFNVAVGLEGLELRPGR 157
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: A0A5D3KA45_9BRAD (DUF992 domain-containing protein n=7 Tax=Bradyrhizobium TaxID=374 RepID=A0A5D3KA45_9BRAD) HSP 1 Score: 156 bits (395), Expect = 5.090e-46 Identity = 89/149 (59.73%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 34 AAALAASVSLASAQSR-VEVGVLECTG-TSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELRAGR 474
AA+L ASV ASAQSR V+VGVLEC G S ++GSVT LGC + G P + Y ATIR+VG+D+GI T +AW VFAP ++GP DL+GNYGG +A++GVGLG N LVGGSN++IALQP SVQ Q GL++AAG+ LELR GR
Sbjct: 12 AASLVASVVGASAQSRLVQVGVLECRGGASVGLVVGSVTNLGCVLRVD-GVPDDRYVATIRKVGIDLGITQETALAWGVFAPVNRLGPGDLSGNYGGAQGSASVGVGLGGNVLVGGSNNSIALQPLSVQGQVGLNVAAGLESLELRPGR 159
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Match: UPI001BAD1E28 (DUF992 domain-containing protein n=1 Tax=Bradyrhizobium manausense TaxID=989370 RepID=UPI001BAD1E28) HSP 1 Score: 156 bits (395), Expect = 5.250e-46 Identity = 89/150 (59.33%), Postives = 110/150 (73.33%), Query Frame = 1
Query: 34 AAALAASVSLASAQSR--VEVGVLECTG-TSTSFIIGSVTELGCAFKPSSGGPSEPYSATIRRVGLDIGINNTTVIAWAVFAPTRQIGPRDLAGNYGGVSANATIGVGLGANALVGGSNSTIALQPASVQAQTGLSIAAGISGLELRAGR 474
AA+L AS++ ASAQS V+VGVLEC G S FI+GSVT LGC + G P + Y ATIR+VG+D+GI T +AW VFAP ++GP DLAGNY G +A++GVGLG N LVGGSN++IALQP SVQ Q GL++AAG+ LELR GR
Sbjct: 12 AASLVASIASASAQSSRMVQVGVLECRGGASVGFIVGSVTNLGCVLRVD-GLPDDRYVATIRKVGIDLGITQETALAWGVFAPVNRLGPGDLAGNYAGAQGSASVGVGLGGNVLVGGSNNSIALQPLSVQGQVGLNVAAGLESLELRPGR 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15943.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15943.2.1 >prot_P-wetherbeei_contig15943.2.1 ID=prot_P-wetherbeei_contig15943.2.1|Name=mRNA_P-wetherbeei_contig15943.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp MMRLSIGFVSAAALAASVSLASAQSRVEVGVLECTGTSTSFIIGSVTELGback to top mRNA from alignment at P-wetherbeei_contig15943:557..1033- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15943.2.1 ID=mRNA_P-wetherbeei_contig15943.2.1|Name=mRNA_P-wetherbeei_contig15943.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig15943:557..1033- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15943:557..1033- >mRNA_P-wetherbeei_contig15943.2.1 ID=mRNA_P-wetherbeei_contig15943.2.1|Name=mRNA_P-wetherbeei_contig15943.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig15943:557..1033- (Phaeothamnion wetherbeei SAG_119_79)back to top |