mRNA_P-wetherbeei_contig15870.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: D7G5A8_ECTSI (Na_H_antiporter domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A8_ECTSI) HSP 1 Score: 135 bits (340), Expect = 1.000e-33 Identity = 82/174 (47.13%), Postives = 109/174 (62.64%), Query Frame = 1
Query: 13 VSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPMGASEEAATATNGGATASTKM-ASGAAAEAAETVGTAQQPAPALGPLDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKL 531
VS EKFAWLVH + V+LASLSP+SSW GLQIGYT AVLD L DGF+ VL +LP+RFFPL YL L++ V++SG+D GPM ++E++ ++ +T+ ASG+ E G + P+ TPLR+ NALVPF+ V+ VT GM+LDG SK+
Sbjct: 257 VSPEKFAWLVHSVGVALASLSPISSWVGLQIGYTAAVLDSLGAP-----------LDGFLVVLRSLPFRFFPLFYLLLIIIVLVSGKDFGPMASAEDSGSSDAVSGDQNTESPASGSQLEGDSAAGXX------XXGITPKAGTPLRSRNALVPFAAVIGVTFLGMILDGISKI 413
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: A0A7S0LMT7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LMT7_9EUKA) HSP 1 Score: 125 bits (313), Expect = 1.220e-32 Identity = 82/185 (44.32%), Postives = 106/185 (57.30%), Query Frame = 1
Query: 7 LKVSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPMGASEEAATATNGGATASTKMA-----SGAAAEAAETVGTAQQP----APALGPLDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKLL 534
L V+ E+FA+LVH+MAV LASLSPVSSW GLQIGY V L D D FV+ + T+PYRFFP+L L LL +++S R+LGPM + T++ A S + A +G A + T Q AP+ GPL P+P T LR NAL+PF ++ T GMLLDG K+L
Sbjct: 34 LNVAPERFAFLVHVMAVGLASLSPVSSWVGLQIGYVADVYKQLGLPD-----------DPFVSTMRTIPYRFFPVLLLALLPILLISRRELGPMANLQAPVTSSTAAAILSEEAAPTVWVNGVALTESWTESHELQSEPAEAPSAGPLTPKPGTKLRVVNALLPFGTIIFATFAGMLLDGAVKIL 207
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: A0A7S0P500_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P500_9EUKA) HSP 1 Score: 127 bits (319), Expect = 7.320e-31 Identity = 85/207 (41.06%), Postives = 107/207 (51.69%), Query Frame = 1
Query: 7 LKVSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPM------------------------------GASEEAATATNGGATASTKMASGAAAEAAETVGTAQQPAPALGPLDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKLLA 537
L V+ E+FA +VH+MAV LASLSPVSSW GLQIGY V L +D D FV+ + T+PYRFFP+L L LL ++ +GRD+GPM GA + A GAA E+ V P+P +GPLDP+P T LRA NAL+PF ++ T GMLLDG SK+LA
Sbjct: 212 LHVAPERFALVVHVMAVCLASLSPVSSWVGLQIGYVADVYKQLGLED-----------DPFVSTMRTIPYRFFPVLLLALLPILLATGRDVGPMASLPPPEPTPSAPAAAAMLREAAIPVEESFGADSDEAXXXXXXXXXXXXXXGGAADESLAAVEERALPSPPVGPLDPKPGTKLRAVNALLPFGSIIVATFAGMLLDGASKVLA 407
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: A0A7S3RS55_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RS55_9SPIT) HSP 1 Score: 112 bits (280), Expect = 3.750e-28 Identity = 70/157 (44.59%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 61 LASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPMGASEEAATATNGGATASTKMASGAAAEAAETVGTAQQPAPALGPLDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKL 531
LAS+SPVSSWAGLQIGY VL + + D D F+TVL+++ +RFFPL+ L L+ V G+D+GP+G + T+ + A + SG A++ VG GPLDP+P TPLR NALVPF +V VT GGM+LDG +K+
Sbjct: 1 LASISPVSSWAGLQIGYVAGVLKSIGRGD-----------DPFLTVLSSVKFRFFPLMMLALVPISVFLGKDIGPLGGARYK-TSNSAQAREGRRPGSGTASQETILVGEGDGDG---GPLDPKPGTPLRPINALVPFGTIVLVTFGGMILDGITKV 142
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: A0A8J5X8U4_DIALT (Na_H_antiporter domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8U4_DIALT) HSP 1 Score: 112 bits (281), Expect = 1.030e-25 Identity = 72/177 (40.68%), Postives = 93/177 (52.54%), Query Frame = 1
Query: 1 AGLKVSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPMGASEEAATATNGGATASTKMASGAAAEAAETVGTAQQPAPALGPLDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKL 531
AGL V +KFA +VH M +ASLSPVSSW GLQ+GY + DGF +LAT+PYR PL+++ L+ V + RD G + +E AA A + A A A + PA GPLDP+P TPLR NAL+PF ++A GML DG +KL
Sbjct: 211 AGLSV--QKFALIVHAMGTCIASLSPVSSWTGLQLGYVAGAVAAAG-----------VPMDGFSMMLATIPYRLLPLIFVALIAVSVFAARDFGGIADAEAAAXXXXX---ADAPLTGEAGARGATNGDAYEAPAGEAGPLDPKPGTPLRPLNALLPFGAIIACAFFGMLADGGAKL 371
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: A0A8J2WUT3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WUT3_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.250e-25 Identity = 74/177 (41.81%), Postives = 95/177 (53.67%), Query Frame = 1
Query: 7 LKVSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPMGASEEAATATNGGATASTKMASGAAAEAAETVGTAQQPAPALGPLDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKLLA 537
L+V EKFA L+H +AV +++ SPVSSW G Q+G G+ P G FV L TLPYRFFPL L + A V +GRD GPM +A + T +T E G A AP +G ++P P TPLRA NALVPF ++ T+GGM+LDGR + A
Sbjct: 186 LRVCKEKFAGLLHFVAVCVSASSPVSSWIGQQVGMVSTATAGV----PAGK-----LPSPFVLTLGTLPYRFFPLCLLAFVAATVTTGRDFGPM---RDAVVKSERETTTTT-----------EDDGDA---APDMGAMEPSPSTPLRAVNALVPFGTIIGATLGGMILDGRKAVKA 336
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: A0A7S0HB77_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HB77_9EUKA) HSP 1 Score: 105 bits (262), Expect = 8.090e-25 Identity = 69/175 (39.43%), Postives = 92/175 (52.57%), Query Frame = 1
Query: 7 LKVSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPMGASEEAATATNGGATASTKMASGAAAEAAETVGTAQQPAPALGPLDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKL 531
+K++ KFA++ H + V +AS+SP+SSW G+QIG+ V + L G D F +ATL YRF PLL L LL ++GRD GPM E AA +S+K AAA + + GPLDP TPLRA NAL+PF V+ V GGM+ G +
Sbjct: 16 VKIATAKFAFVAHTVGVCIASMSPISSWVGMQIGFIGGVYETL--------GGPWAKADPFSGFIATLQYRFLPLLMLVFLLINAVTGRDFGPMLDEERAALLLPDAPASSSKEGERAAAPSPD------------GPLDPPAGTPLRARNALLPFGAVMGVAFGGMISQGLGAI 170
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: A0A5D6Y930_9STRA (Na_H_antiporter domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y930_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.900e-24 Identity = 69/175 (39.43%), Postives = 97/175 (55.43%), Query Frame = 1
Query: 13 VSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPMGASEEAATATNGGATASTKMASGAAAEAAETVGTAQQPAPALGPLDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKLLA 537
VS EKFA ++H++ V L S++PVSSW G++IGY A L L Q D D FVT L+ L YRFFP+L++ + ++ +D GPM E+ A A+ T + +G P P LGPL+P PLR NA+VPF ++A+T GGM+ DG ++L A
Sbjct: 281 VSREKFAAIIHVIGVCLPSMAPVSSWIGVEIGYVSAQLRDL-QLD----------WDPFVTCLSCLHYRFFPILFIAFIFITIICEKDFGPMVQYEKDAAASPIQTGYMTPV----------DLGPCASPTPELGPLEPDTRKPLRWQNAVVPFVAIIALTFGGMIFDGYTRLYA 434
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: A0A2D4CF21_PYTIN (Na_H_antiporter domain-containing protein (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF21_PYTIN) HSP 1 Score: 102 bits (255), Expect = 4.110e-22 Identity = 66/177 (37.29%), Postives = 96/177 (54.24%), Query Frame = 1
Query: 13 VSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPMGASE-EAATA---TNGGATASTKMASGAAAEAAETVGTAQQPAPALGPLDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKL 531
VS EKFA ++H + V L S++PVSSW G++IGY A + L D F+T L+ L YRFFP+L++GL+ +++ +D GPM E +AAT+ T GG + G P P LGPL+P PLR NA++PF ++ +T GM+ DG ++L
Sbjct: 780 VSREKFAAIIHTIGVCLPSMAPVSSWIGVEIGYVAAQIRDLKLD-----------WDPFLTCLSCLHYRFFPILFIGLIFITIITEKDFGPMVQFEKDAATSPLNTEGGPYTPLDL------------GPCASPEPELGPLEPDTQKPLRWQNAVIPFVSIILLTFFGMIYDGYTRL 933
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Match: F0XXP7_AURAN (Na_H_antiporter domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXP7_AURAN) HSP 1 Score: 102 bits (253), Expect = 4.610e-22 Identity = 76/181 (41.99%), Postives = 90/181 (49.72%), Query Frame = 1
Query: 7 LKVSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPGGDGXXXXXRDGFVTVLATLPYRFFPLLYLGLLLAVVLSGRDLGPMGASEEAATATNGGATASTKMASGAAAEAAETVGTAQQPAPALGP----LDPRPDTPLRAYNALVPFSVVVAVTVGGMLLDGRSKLLA 537
L+V EKFA L+H +AVS+++ SPVSSW G Q+G A A PG FV + TLPYR FPL L + A V S RD GPM A A N EAA G L+P P TPLRA NALVPF +VA T+GGM+LDGR+ L A
Sbjct: 139 LRVCREKFAALLHFVAVSVSASSPVSSWIGQQVGMVSAAT---AAVPPGA------IPSAFVLTVRTLPYRLFPLALLAFVAANVASDRDFGPM----RDAVARN---------------EAAPAPGXXXXXXXXXXXXXXXLEPAPGTPLRALNALVPFGTIVAATLGGMVLDGRAALRA 291 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15870.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15870.1.1 >prot_P-wetherbeei_contig15870.1.1 ID=prot_P-wetherbeei_contig15870.1.1|Name=mRNA_P-wetherbeei_contig15870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp AGLKVSGEKFAWLVHIMAVSLASLSPVSSWAGLQIGYTQAVLDGLAQQDPback to top mRNA from alignment at P-wetherbeei_contig15870:756..1292- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15870.1.1 ID=mRNA_P-wetherbeei_contig15870.1.1|Name=mRNA_P-wetherbeei_contig15870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig15870:756..1292- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15870:756..1292- >mRNA_P-wetherbeei_contig15870.1.1 ID=mRNA_P-wetherbeei_contig15870.1.1|Name=mRNA_P-wetherbeei_contig15870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig15870:756..1292- (Phaeothamnion wetherbeei SAG_119_79)back to top |