mRNA_P-wetherbeei_contig15626.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: D8LTL8_ECTSI (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL8_ECTSI) HSP 1 Score: 121 bits (303), Expect = 8.400e-29 Identity = 69/130 (53.08%), Postives = 90/130 (69.23%), Query Frame = 1
Query: 103 FLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVLRGGIPARQLLATNGTIGGVRVGSIGPAAGPLAAGDLRGNIFRVVLRGATPAEPGALVTAALEALSRSGFVNFYGTQRVGSP 492
++ F LRKEGREH AL++ALRVP AL+ GIKDKRA+TTQ +++G +P R++L NG+I GV VG++ A L G+L GN F VV+RG PGA V ++LE +GF+NFYGTQRVGSP
Sbjct: 366 WVRFGLRKEGREHHVTALALSKALRVPLSALSFGGIKDKRAITTQACIVKG-VPPRKILEINGSIPGVTVGNLSYCARGLNLGELSGNKFSVVVRGVMV--PGAAVKSSLEEACSNGFINFYGTQRVGSP 492
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: A0A2H1CFM5_FASHE (TRUD domain-containing protein n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1CFM5_FASHE) HSP 1 Score: 92.8 bits (229), Expect = 9.020e-20 Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 94 NSGFLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVLRGGIPARQLLATNGTIGGVRVGSIGPAAGPLAAGDLRGNIFRVVLRGATPAEPGALVTAALEALSRSGFVNFYGTQRVG 486
N + F L KEG++ + L+R L + G+ AG KD+RA+TTQ V L+G I +R+L A N + G+R+G+ PL GDL GN F VVLR ++ +++ A+EA R GFVN+YG QR G
Sbjct: 111 NQAYCRFVLYKEGKDTISAIQLLSRFLHIRPGSFAYAGTKDRRAITTQFVTLKG-IDSRRLSALNQKLRGIRLGNFSYVPQPLFLGDLDGNRFTVVLRSVNVSD--SVIREAVEAWQRDGFVNYYGLQRFG 238
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: A0A8E0RQ08_9TREM (tRNA pseudouridine synthase D n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RQ08_9TREM) HSP 1 Score: 92.8 bits (229), Expect = 6.780e-19 Identity = 55/131 (41.98%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 94 NSGFLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVLRGGIPARQLLATNGTIGGVRVGSIGPAAGPLAAGDLRGNIFRVVLRGATPAEPGALVTAALEALSRSGFVNFYGTQRVG 486
N + F L KEG++ + L+R L + G+ AG KD+RA+TTQ V L+G I +R+L A N + G+R+G+ PL GDL GN F VVLR ++ ++V +EA R GFVN+YG QR G
Sbjct: 179 NQAYCRFVLYKEGKDTISAIQLLSRLLHIRPGSFAYAGTKDRRAITTQFVTLKG-IDSRRLSALNQKLRGIRLGNFSYVPKPLFLGDLDGNRFTVVLRSVEASD--SIVREGIEAWQRDGFVNYYGLQRFG 306
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: A0A4E0R8H9_FASHE (Pseudouridylate synthase 7 n=2 Tax=Fasciola TaxID=6191 RepID=A0A4E0R8H9_FASHE) HSP 1 Score: 92.8 bits (229), Expect = 6.780e-19 Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 94 NSGFLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVLRGGIPARQLLATNGTIGGVRVGSIGPAAGPLAAGDLRGNIFRVVLRGATPAEPGALVTAALEALSRSGFVNFYGTQRVG 486
N + F L KEG++ + L+R L + G+ AG KD+RA+TTQ V L+G I +R+L A N + G+R+G+ PL GDL GN F VVLR ++ +++ A+EA R GFVN+YG QR G
Sbjct: 178 NQAYCRFVLYKEGKDTISAIQLLSRFLHIRPGSFAYAGTKDRRAITTQFVTLKG-IDSRRLSALNQKLRGIRLGNFSYVPQPLFLGDLDGNRFTVVLRSVNVSD--SVIREAVEAWQRDGFVNYYGLQRFG 305
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: K3ZR46_SETIT (TRUD domain-containing protein n=4 Tax=Setaria TaxID=4554 RepID=K3ZR46_SETIT) HSP 1 Score: 91.3 bits (225), Expect = 2.400e-18 Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = 1
Query: 103 FLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVLRGGIPARQLLATNGTIGGVRVGSIGPAAGPLAAGDLRGNIFRVVLRGATPAEPGALVTAALEALSRSGFVNFYGTQRVGS 489
FL F L KE R+ + LG + + L V + AG KDKRAVTTQ+V L + A +L+A N + G+RVG LA G LRGN F + LR AE ++ AA++ LS++GF+N+YG QR GS
Sbjct: 238 FLRFHLYKENRDTQEALGVIGKMLGVQPRSFGFAGTKDKRAVTTQQVTLFK-VHASRLVALNSKLAGIRVGDFSYVNEGLALGQLRGNRFAITLRNVV-AESDDVIKAAVDGLSKNGFINYYGLQRFGS 364
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: A0A067CP05_SAPPC (TRUD domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CP05_SAPPC) HSP 1 Score: 89.7 bits (221), Expect = 7.930e-18 Identity = 56/132 (42.42%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 103 FLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVLRGGIPARQLLATNGTIG--GVRVGSIGPAAGPLAAGDLRGNIFRVVLRGATPAEPGALVTAALEALSRSGFVNFYGTQRVGSP 492
++ F L+K +HF L ALARA + PT + T AG KDKRAVTTQR+V + P+ LL + + G+ VG + A PL G GN F + LR E +V AA +++ +GF+N++G QRVGSP
Sbjct: 223 YVQFVLQKVNVDHFSALEALARAAKTPTSSFTYAGTKDKRAVTTQRLVAQSVAPS-VLLDAHAALAPMGLAVGHLAYVAAPLTLGQSGGNQFTIRLRNVE--ESPEVVAAAFASVASTGFINYFGLQRVGSP 351
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: A0A183AA80_9TREM (TRUD domain-containing protein n=1 Tax=Echinostoma caproni TaxID=27848 RepID=A0A183AA80_9TREM) HSP 1 Score: 88.6 bits (218), Expect = 2.020e-17 Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 1
Query: 94 NSGFLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVLRGGIPARQLLATNGTIGGVRVGSIGPAAGPLAAGDLRGNIFRVVLRGATPAEPGALVTAALEALSRSGFVNFYGTQRVG 486
N + F L KEG++ + L+R L + G+ AG KD+RA+TTQ V L+G I + +L A N + G+R+G+ PL GDL GN F +VLR + ++V A+E R GF+N+YG QR G
Sbjct: 166 NQAYCRFVLYKEGKDTISAIQLLSRCLHIRPGSFAYAGTKDRRAITTQFVTLKG-IDSHRLSALNRKLRGIRLGNFSYVPRPLFLGDLDGNRFTLVLRSVQALD--SVVQKAIEVWQRDGFINYYGLQRFG 293
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: A0A8J5XT50_DIALT (TRUD domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XT50_DIALT) HSP 1 Score: 87.8 bits (216), Expect = 3.850e-17 Identity = 62/136 (45.59%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 103 FLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVL-------RGGIPARQLLATNGTIGGVRVGSIGPAAGPLAAGDLRGNIFRVVLRGATPAEPGALVTAALEALSRSGFVNFYGTQRVGS 489
++ F L KE R+ DVL +LARAL + AGIKD+RAVT QRV G I R L GVR+G + AA P+ G+L GN F +VLR A PA+ A V AA AL GFVN+YG QR G+
Sbjct: 172 YVHFVLVKENRDTLDVLDSLARALGCRPSVFSFAGIKDRRAVTVQRVSAFKVHPDRLGAIGERSALGV-----GVRLGGVRFAADPVRCGELAGNHFTIVLR-AVPADEVAHVHAAAAALRERGFVNYYGLQRFGN 301
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: C5X383_SORBI (TRUD domain-containing protein n=3 Tax=Andropogoneae TaxID=147429 RepID=C5X383_SORBI) HSP 1 Score: 87.4 bits (215), Expect = 5.250e-17 Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = 1
Query: 103 FLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVLRGGIPARQLLATNGTIGGVRVGSIGPAAGPLAAGDLRGNIFRVVLRGATPAEPGALVTAALEALSRSGFVNFYGTQRVGS 489
FL F L KE ++ + LG + + L V + AG KDKRAVTTQ+V L + A +L A N + G+RVG L G LRGN F + LR AE ++ AA+ LS++GF+N+YG QR GS
Sbjct: 232 FLRFNLYKENKDTQEALGVIGKMLGVQPRSFGFAGTKDKRAVTTQQVTLFK-VHASRLAALNSKLAGIRVGDFSYVKEGLTLGQLRGNRFAITLRNVI-AESDDVINAAVNGLSKNGFINYYGLQRFGS 358
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Match: T0SDB0_SAPDV (TRUD domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SDB0_SAPDV) HSP 1 Score: 87.0 bits (214), Expect = 6.980e-17 Identity = 57/134 (42.54%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 103 FLSFALRKEGREHFDVLGALARALRVPTGALTAAGIKDKRAVTTQRVVLRGGIPARQLLATNGTIG--GVRVGSIGPAAGPLAAGDLRGNIFRVVLRGA--TPAEPGALVTAALEALSRSGFVNFYGTQRVGSP 492
++ F L+K +HF L ALARA + PT + T AG KDKRA+TTQR+V + P R LL + + G+ VG + A PL G GN F + LR TP +V AA ++ +GF+N++G QRVGSP
Sbjct: 250 YVQFVLQKVDVDHFTALEALARAAKTPTSSFTYAGTKDKRAITTQRLVAQSVAP-RALLDAHTALAPMGLAVGHLAYVATPLTLGQSGGNQFTIRLRNVEGTP----DVVNAAFASVGATGFINYFGLQRVGSP 378 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15626.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15626.1.1 >prot_P-wetherbeei_contig15626.1.1 ID=prot_P-wetherbeei_contig15626.1.1|Name=mRNA_P-wetherbeei_contig15626.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp RGGGGGNDSGGCCGDGVGGESAGNGGTGGGGNSGFLSFALRKEGREHFDVback to top mRNA from alignment at P-wetherbeei_contig15626:98..670- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15626.1.1 ID=mRNA_P-wetherbeei_contig15626.1.1|Name=mRNA_P-wetherbeei_contig15626.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig15626:98..670- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15626:98..670- >mRNA_P-wetherbeei_contig15626.1.1 ID=mRNA_P-wetherbeei_contig15626.1.1|Name=mRNA_P-wetherbeei_contig15626.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig15626:98..670- (Phaeothamnion wetherbeei SAG_119_79)back to top |