mRNA_P-wetherbeei_contig15618.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: A0A6J8F0U4_MYTCO (ExlX n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8F0U4_MYTCO) HSP 1 Score: 116 bits (290), Expect = 5.220e-29 Identity = 60/140 (42.86%), Postives = 84/140 (60.00%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWIYNSG 420
+A+N + N +SCGMC G+G G G +P+ + I V V D CPEC GSVD +N DGR+ ++ VQCPVG TKL+YK +GSN WYLKL +RN+R+PV+ +++ WA M H+ +D W+ G
Sbjct: 70 IALNKPQFFNSLSCGMCFKVHGSGKGLGSDPIVGDSI-------VFVKDLCPECLAGSVDLAENG--DGRWEVEIQAVQCPVGNTKLEYKFQGSNPWYLKLQVRNARIPVTRLSLWQPKSQRWAAMQHT-SDGFWLMGPG 199
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: A0A210QVR1_MIZYE (Expansin-YoaJ n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QVR1_MIZYE) HSP 1 Score: 115 bits (287), Expect = 1.190e-28 Identity = 63/163 (38.65%), Postives = 95/163 (58.28%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWIYNSGSEGLVRSGCRLRVSSVLGGAVVE 489
VA+N+ + ++CGMC +GTG G G +P+ I V V D CPEC GSVD+ N DGR+G+ +QCPVG T ++YK +GSN +YLKL +RN+R+P + V + D ++A+ H+ TD W +G + VR LR+++ G V++
Sbjct: 66 VALNSPQFFGSLACGMCFTVNGTGHGLGNDPINGQHI-------VFVKDLCPECHAGSVDFAKNG--DGRWGISIRAIQCPVGNTPIEYKFQGSNDYYLKLQVRNARIPATKVEMR-QQDNHYASFQHT-TDGFWTMGAGFDKPVRYPIHLRLTAANGDTVLD 217
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: A0A2C9LCA8_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LCA8_BIOGL) HSP 1 Score: 114 bits (285), Expect = 2.470e-28 Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWIYNSG 420
VA+N + N M+CGMCI G+G G G NP+ I Y V D CP C +G VD+ DGR+ + VQCPVG++ +QY +GSN WY+KL IRN+R+P++ V I+ N G W + HS D W+ + G
Sbjct: 70 VALNRPQFLNSMTCGMCIKVVGSGHGLGNNPIVGEHIVY-------VKDMCPVCHEGDVDFA--LDGDGRWNITMQAVQCPVGSSTIQYAFQGSNAWYIKLQIRNARIPITGVQIEKN--GAWQTLTHS-IDGYWLLSGG 197
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: V4ATR2_LOTGI (Expansin-like EG45 domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4ATR2_LOTGI) HSP 1 Score: 112 bits (280), Expect = 1.310e-27 Identity = 60/136 (44.12%), Postives = 81/136 (59.56%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWI 408
VA+N + SCGMC + G G G NP+ + + V V D CPEC GS+D+ N DGR+ ++ VQCPVG TKL+YK +GSN +Y+KL IRN+R+P AVA+ +G+W M+HS D WI
Sbjct: 68 VALNKPQFLGSYSCGMCFKVNSNGQGLGTNPIKGHFV-------VFVADLCPECKTGSLDFAING--DGRWKIEIQAVQCPVGNTKLEYKFQGSNSYYIKLQIRNARIP--AVAVKIKQNGSWKAMSHS-ADGFWI 191
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: A0A8B6C3Z3_MYTGA (Expansin n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6C3Z3_MYTGA) HSP 1 Score: 116 bits (290), Expect = 2.910e-27 Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWIYNSG 420
VA+N + N +SCGMC G+G G G +P+ + V V D CPEC GSVD +N DGR+ ++ VQCPVG TKL+YK +GSN WYLKL +RN+R+PV+ +++ WA M HS +D W+ G
Sbjct: 372 VALNRPQFFNSLSCGMCFKVHGSGKGLGSDPIVGDST-------VFVKDLCPECLAGSVDLAENG--DGRWEVEIQAVQCPVGNTKLEYKFQGSNPWYLKLQVRNARIPVTGLSVWQPKSQRWAAMHHS-SDGFWLMGPG 501
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: UPI001EE62068 (expansin-YoaJ-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE62068) HSP 1 Score: 109 bits (273), Expect = 1.570e-26 Identity = 60/161 (37.27%), Postives = 96/161 (59.63%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWIYNSGSEGLVRSGCRLRVSSVLGGAV 483
VA+N Y+ ++CGMC GTG G+G +P+ + V V D CPEC +G +D + + DG + ++ VQCPVG TK++YK +GSN WY+KL +RN+R+PV+++ +D DG M H+ +D W S+GL+ +L ++S+ G ++
Sbjct: 74 VAINAEQYSGSLACGMCFRVLGTGVGTGSDPIKGDFY-------VFVNDICPECKEGDIDLAE--EGDGSWEVEIQAVQCPVGNTKIEYKFQGSNAWYIKLQVRNARLPVNSILVD--RDGRPEPMKHT-SDGFWEL---SDGLIELPIKLEMTSINGESI 219
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: K1QR45_CRAGI (Expansin-yoaJ n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1QR45_CRAGI) HSP 1 Score: 108 bits (269), Expect = 5.150e-26 Identity = 54/139 (38.85%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWIYNS 417
VA+N + +SCGMC GTG G+G +P+ + V D CPEC G++D +N DGR+ ++ +QCPVG K++YK +GSN WYLKL IRN+R+P + V + W+ + H+ TD W++ S
Sbjct: 62 VALNAPQFFGSLSCGMCFRVHGTGQGAGNDPITGTFTAF-------VKDLCPECHAGALDLAENG--DGRWKIEIQAIQCPVGNGKIEYKFQGSNNWYLKLQIRNARIPATGVEMYQPKSNRWSALHHT-TDGFWVFGS 190
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: A0A8B8DMT4_CRAVI (uncharacterized protein LOC111128005 isoform X2 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DMT4_CRAVI) HSP 1 Score: 107 bits (268), Expect = 7.250e-26 Identity = 54/139 (38.85%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWIYNS 417
VA+N + +SCGMC GTG G+G +P+ + V D CPEC G++D +N DGR+ ++ +QCPVG K++YK +GSN WYLKL IRN+R+P + V + W+ + H+ TD W++ S
Sbjct: 62 VALNAPQFFGSLSCGMCFRVHGTGQGAGNDPITGTFTAF-------VKDLCPECHAGALDLAENG--DGRWRIEIQAIQCPVGNGKIEYKFQGSNPWYLKLQIRNARIPATTVEMYQPKSRRWSALHHT-TDGFWVFGS 190
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: UPI001EB09B08 (expansin-YoaJ-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB09B08) HSP 1 Score: 106 bits (265), Expect = 1.980e-25 Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWIYNSGSEGLVRSGCRLRVSSVLGGAV 483
VA+N Y+ ++CGMC G G G+G +P+ + V V D CPEC +G +D + + DG + ++ VQCPVG TK++YK +GSN WY+KL +RN+R+PV+++ +D DG M H+ D W S+GLV +L +++V G +V
Sbjct: 65 VAINAEQYSGSIACGMCFRVRGKGVGTGSDPIQGDFY-------VFVNDICPECKEGDIDLAE--EGDGSWEVEIQAVQCPVGNTKIEYKFQGSNPWYIKLQVRNARIPVNSIMVD--RDGQPHPMKHT-ADGFWEL---SDGLVELPIKLEMTAVNGESV 210
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Match: A0A8B8E688_CRAVI (LOW QUALITY PROTEIN: uncharacterized protein LOC111128007 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8E688_CRAVI) HSP 1 Score: 103 bits (257), Expect = 3.040e-24 Identity = 55/139 (39.57%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 1 VAMNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPECGKGSVDWRDNTQLDGRFGMKWYPVQCPVGATKLQYKTEGSNVWYLKLSIRNSRVPVSAVAIDCNHDGNWANMAHSGTDHAWIYNS 417
VA+N + +SCG C GTG GSG +P+ + V D CP C G +D +N DGR+ ++ +QCPVG K++YK +GSN WYLKL IRN+R+P + V + WA M S TD W++ S
Sbjct: 62 VALNAPQFFGSLSCGXCFRVRGTGQGSGNDPITGTFTAF-------VKDLCPGCRAGDLDLAENG--DGRWRIEIQAIQCPVGNGKIEYKFQGSNPWYLKLQIRNARIPATTVEMYQPKSRRWAAMRPS-TDGFWVFGS 190 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15618.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15618.1.1 >prot_P-wetherbeei_contig15618.1.1 ID=prot_P-wetherbeei_contig15618.1.1|Name=mRNA_P-wetherbeei_contig15618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp MNNIDYANGMSCGMCIAASGTGSGSGRNPLPTNKIRYGVSKDVVVVDRCPback to top mRNA from alignment at P-wetherbeei_contig15618:161..840- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15618.1.1 ID=mRNA_P-wetherbeei_contig15618.1.1|Name=mRNA_P-wetherbeei_contig15618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=680bp|location=Sequence derived from alignment at P-wetherbeei_contig15618:161..840- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15618:161..840- >mRNA_P-wetherbeei_contig15618.1.1 ID=mRNA_P-wetherbeei_contig15618.1.1|Name=mRNA_P-wetherbeei_contig15618.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig15618:161..840- (Phaeothamnion wetherbeei SAG_119_79)back to top |