mRNA_P-wetherbeei_contig15565.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: A0A6H5JBJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ8_9PHAE) HSP 1 Score: 103 bits (256), Expect = 5.600e-23 Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 85 AVGSRATLGRGVGGI-------------GSVEVAVPQQAKPIWFAGSGAVRAEWSALPGGAVITRMLEGLEEAGEYF-RYVAVVEGLLCAHLRATRENGAARLVRGLWRQLIVTCLAF 396
A G+ +G G GG G V VP++ +PIWFAGSGA++AEWSALPGGA + ++ + A ++ +YVAVVEGLL AHLRA + G ++LV+ LWRQL+ TC+AF
Sbjct: 840 ATGAAKAVGGGRGGFRGSKAISVPTRGGGEAVVMVPKRPRPIWFAGSGAIQAEWSALPGGARVVCGVKFVSAATHWYAKYVAVVEGLLTAHLRADDQQGPSQLVQKLWRQLVATCIAF 957
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: A0A7S1U6F4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6F4_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.000e-10 Identity = 38/109 (34.86%), Postives = 54/109 (49.54%), Query Frame = 1
Query: 142 VAVPQQAKPIWFAGSGAVRAEWSALPGGAVITRMLEGLEEAGEYFRYVAVVEGLLCAHLR------------------------ATRENGAARLVRGLWRQLIVTCLAF 396
+ VP+Q++PIWF G+GA+ EWS+LP G R L+ LEE +Y Y+A VE L + R A + L R LWRQ++V+ +AF
Sbjct: 576 IVVPRQSQPIWFKGTGAIAPEWSSLPDGDDAARHLQRLEEERQYAAYIATVEAFLNGYQRSGALEQEVLQADHSLVSSLTTSFDAVDDGEQNELFRRLWRQMVVSAIAF 684
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: A0A0P1AJK2_PLAHL (CEP76-C2 domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJK2_PLAHL) HSP 1 Score: 57.0 bits (136), Expect = 8.150e-7 Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 1
Query: 130 GSVEVAVPQQAKPIWFAGSGAVRAEWSALPGGAV--------------ITRMLEG--------LEEAGEYFRYVAVVEGLLCAHLRATRENGAARLVRGLWRQLIVTCLAF 396
G V + +P+ +PIWFAG+GAV+A W AL G T M E LE ++ ++++E LL + +R+ +GA +L LW+QL+VTC AF
Sbjct: 1163 GKVIINMPKIPRPIWFAGTGAVKAVWCALANGLAELRPQHTNTTTNLSTTSMCEHQLCEEVRQLEAKKKFAHCISILESLLTSLIRS---HGADKLETQLWKQLVVTCNAF 1270
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: A0A662WPX4_9STRA (COesterase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPX4_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.520e-6 Identity = 40/112 (35.71%), Postives = 54/112 (48.21%), Query Frame = 1
Query: 130 GSVEVAVPQQAKPIWFAGSGAVRAEWSALPGG------------AVITRMLE-----------GLEEAGEYFRYVAVVEGLLCAHLRATRENGAARLVRGLWRQLIVTCLAF 396
G V + +P+ +PIWFAG+GAV+A W AL G AV T L LE ++ + + +E LL A +RA G L LW+QL+VTC AF
Sbjct: 1082 GKVVINMPKVPRPIWFAGTGAVKAVWCALADGFSQLRPQHAAPSAVTTSTLSMCDHRLCEEVRQLEAKKKFAQCITTLESLLIALVRA---RGVDELETKLWKQLVVTCNAF 1190
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: A0A2D4BYJ7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYJ7_PYTIN) HSP 1 Score: 54.7 bits (130), Expect = 4.610e-6 Identity = 40/117 (34.19%), Postives = 52/117 (44.44%), Query Frame = 1
Query: 130 GSVEVAVPQQAKPIWFAGSGAVRAEWSAL------------------PGGAV----------ITRMLEGLEEAGEYFRYVAVVEGLLCAHLRATRENGAARLVRGLWRQLIVTCLAF 396
G V + +P+ +PIWFAG+GAV+A W AL PG A + + LE Y + + VE LL RA G A L LW+QL+VTC AF
Sbjct: 111 GRVAIRLPKIPRPIWFAGTGAVKAVWCALAQGFQSLQPLSPHAMTVSPGKAAQRALAVCDHRLCEEIRRLEAQQHYDQCITTVETLLIXXXRA---RGVASLESKLWKQLVVTCNAF 224
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: W2MAT8_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MAT8_PHYPR) HSP 1 Score: 54.7 bits (130), Expect = 4.870e-6 Identity = 37/111 (33.33%), Postives = 55/111 (49.55%), Query Frame = 1
Query: 130 GSVEVAVPQQAKPIWFAGSGAVRAEWSALP------------GGAVITRM----------LEGLEEAGEYFRYVAVVEGLLCAHLRATRENGAARLVRGLWRQLIVTCLAF 396
G V + +P+ +PIWFAG+GAV+A W AL G++ T + + LE ++ + + +E LL A +RA G L LW+QL+VTC AF
Sbjct: 282 GKVIINMPKVPRPIWFAGTGAVKAVWCALADGFSQLRPQHSIAGSITTSVSVCDHRLCEEVRQLEAKKKFTQCITTLESLLIALVRA---RGVDELETKLWKQLVVTCNAF 389
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: A0A8K1C4C5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4C5_PYTOL) HSP 1 Score: 54.3 bits (129), Expect = 6.790e-6 Identity = 41/114 (35.96%), Postives = 54/114 (47.37%), Query Frame = 1
Query: 130 GSVEVAVPQQAKPIWFAGSGAVRAEWSALPGG---------------------AV----ITRMLEGLEEAGEYFRYVAVVEGLLCAHLRATRENGAARLVRGLWRQLIVTCLAF 396
G V V +P+ KPIWFAG+GAV+A W AL G AV + L +E +Y + + VE LL + +RA G L LW+QL+VTC AF
Sbjct: 437 GKVVVNMPKIPKPIWFAGTGAVKAVWCALAQGFESLNSTSTKSSPSKKPQSVLAVCEHNLCEELRQMEAKQQYAQCITTVETLLISLVRA---RGVDVLETKLWKQLVVTCNAF 547
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: W2PJR0_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PJR0_PHYPN) HSP 1 Score: 54.3 bits (129), Expect = 6.820e-6 Identity = 37/111 (33.33%), Postives = 55/111 (49.55%), Query Frame = 1
Query: 130 GSVEVAVPQQAKPIWFAGSGAVRAEWSALP------------GGAVITRM----------LEGLEEAGEYFRYVAVVEGLLCAHLRATRENGAARLVRGLWRQLIVTCLAF 396
G V + +P+ +PIWFAG+GAV+A W AL G++ T + + LE ++ + + +E LL A +RA G L LW+QL+VTC AF
Sbjct: 451 GKVIINMPKVPRPIWFAGTGAVKAIWCALADGFSQLRPQHSIAGSITTSVSVCDHRLCEEVRQLEAKKKFTQCITTLESLLIALVRA---RGVDELETKLWKQLVVTCNAF 558
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: D8LGQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ8_ECTSI) HSP 1 Score: 54.3 bits (129), Expect = 6.910e-6 Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 1
Query: 85 AVGSRATLGRGVGGI-------------GSVEVAVPQQAKPIWFAGSGAVRAEWSALPGGAVIT 237
A G+ +G G GG G V VP++ +PIWFAGSGA++AEWSALPGGA ++
Sbjct: 840 ATGAAKAVGGGRGGFRGSKAISVLTRGGGEAVVMVPKRPRPIWFAGSGAIQAEWSALPGGARVS 903
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Match: A0A329SKF6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SKF6_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 9.290e-6 Identity = 38/113 (33.63%), Postives = 55/113 (48.67%), Query Frame = 1
Query: 124 GIGSVEVAVPQQAKPIWFAGSGAVRAEWSALPGG--------AV--------------ITRMLEGLEEAGEYFRYVAVVEGLLCAHLRATRENGAARLVRGLWRQLIVTCLAF 396
G G V + +P+ +PIWFAG+GAV+A W +L G AV + + LE ++ + + +E LL A +RA G L LW+QL+VTC AF
Sbjct: 460 GDGKVIINMPKVPRPIWFAGTGAVKAVWCSLADGFPQLRPQHAVAGATGSTTAMCDHRLCEEVRQLEAKKKFTQCITTLESLLIALIRA---RGVDELETKLWKQLVVTCNAF 569 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15565.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15565.1.1 >prot_P-wetherbeei_contig15565.1.1 ID=prot_P-wetherbeei_contig15565.1.1|Name=mRNA_P-wetherbeei_contig15565.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp MTGTAADADADGGDGGNGGGGGGGTGVGAVGSRATLGRGVGGIGSVEVAVback to top mRNA from alignment at P-wetherbeei_contig15565:1031..1594+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15565.1.1 ID=mRNA_P-wetherbeei_contig15565.1.1|Name=mRNA_P-wetherbeei_contig15565.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig15565:1031..1594+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15565:1031..1594+ >mRNA_P-wetherbeei_contig15565.1.1 ID=mRNA_P-wetherbeei_contig15565.1.1|Name=mRNA_P-wetherbeei_contig15565.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig15565:1031..1594+ (Phaeothamnion wetherbeei SAG_119_79)back to top |