mRNA_P-wetherbeei_contig15564.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: A0A7C4XMN7_9HYPH (DUF459 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XMN7_9HYPH) HSP 1 Score: 147 bits (370), Expect = 1.370e-39 Identity = 76/135 (56.30%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 7 SPGQASTAPQAGD----LRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITPSRGADRGQSRAALTQQPFFIALSKGERLPPKPGRADDFRWPRSDDIP 399
+P QA +AP++G+ RADN +VSFR A GREEQVT+EI+RPAI SVI LVTRR+ GD+ + VG+T+T+TL+NG++VM S+T + R TQ PFF L KGER P+PGRADDFRWPR DD+P
Sbjct: 289 APRQAGSAPRSGEPGGSTRADNTKVSFRVPGASGREEQVTVEILRPAIPASVIALVTRRESGDRATPVGETVTETLANGVMVMGSLTVTATPSLKGQRLPPTQMPFFRVLVKGERQTPRPGRADDFRWPREDDVP 423
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: A0A2W4R8Y6_9PROT (DUF459 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4R8Y6_9PROT) HSP 1 Score: 136 bits (342), Expect = 2.790e-35 Identity = 68/126 (53.97%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 31 PQAGDLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITP--SRGADRGQSRAALTQQPFFIALSKGERLPPKPGRADDFRWPRSDDIPP 402
P+ G+L+A+N VS + GGR E++T+EIVRPAI SV+ LV+RR D+P+Q+GDT+ DTL GL V+ SITP + G+ + R A TQ PFF L KGER+PPKPGRADDF WP D + P
Sbjct: 338 PRVGELKAENSTVSIKVPGNGGRSEEITVEIVRPAIPASVVALVSRRQSADRPAQLGDTVPDTLPGGLTVLSSITPGLAAGSQAHRRRLAPTQSPFFKVLVKGERIPPKPGRADDFTWPPPDPVGP 463
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: A0A2P5LWL7_9HYPH (Uncharacterized protein (Fragment) n=1 Tax=Methylocystis sp. TaxID=1911079 RepID=A0A2P5LWL7_9HYPH) HSP 1 Score: 130 bits (327), Expect = 7.750e-34 Identity = 66/119 (55.46%), Postives = 86/119 (72.27%), Query Frame = 1
Query: 40 GDLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITPSRGADRGQSRAAL--TQQPFFIALSKGERLPPKPGRADDFRWPRSD 390
G+ +ADN +++ R+ A GREE V ++IVRPAI SV+ LVTRR+ DKPSQ+G+TL D ++ GL VM S+TPS + +G SR + TQ PFF L KGERL PKPGRADD WPR++
Sbjct: 212 GEQKADNGKINLRTLGASGREEIVQLDIVRPAIPASVVALVTRRESPDKPSQMGETLIDQIAGGLTVMSSVTPSGTSSQGGSRQRISPTQTPFFRVLVKGERLTPKPGRADDLGWPRTE 330
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: A0A2S5PBM4_HYPSQ (Uncharacterized protein n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PBM4_HYPSQ) HSP 1 Score: 131 bits (330), Expect = 1.600e-33 Identity = 67/119 (56.30%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 40 GDLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITPSRGADRGQSRAAL--TQQPFFIALSKGERLPPKPGRADDFRWPRSD 390
G+ +ADN R++ R+ A GREE V ++IVRPAI SV+ LVTRR+ DKPSQ+G+TL D ++ GL VM S+TPS + +G R + TQ PFF L KGERL PKPGRADD WPR+D
Sbjct: 335 GEQKADNGRINLRTLGASGREEIVQLDIVRPAIPASVVALVTRRESPDKPSQMGETLIDQIAGGLTVMSSVTPSGTSSQGGGRQRISPTQTPFFRVLVKGERLTPKPGRADDLGWPRAD 453
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: A0A7C2QWD3_9HYPH (DUF459 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QWD3_9HYPH) HSP 1 Score: 129 bits (324), Expect = 5.870e-33 Identity = 64/125 (51.20%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 13 GQASTAPQ-AGDLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITPSRGADRGQSRAALTQQPFFIALSKGERLPPKPGRADDFRWPR 384
GQ AP+ + +L+ADN R++ RS GREE VTI+++RPAI +VI LVTR++ DKP+Q+GD L + + GL+V SITP+ G RA+ + P++ L KGERLPPKPGRADDF WP+
Sbjct: 296 GQQRGAPEGSNELKADNGRITLRSVSPSGREESVTIDLLRPAIPSAVIALVTRKESADKPTQMGDVLAEDVGGGLVVQSSITPAGAGAPGGRRASPSLAPYYQVLIKGERLPPKPGRADDFSWPK 420
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: A0A2W4MT21_9PROT (DUF459 domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4MT21_9PROT) HSP 1 Score: 127 bits (319), Expect = 3.430e-32 Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 1
Query: 40 GDLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITPS--RGADRGQSRAALTQQPFFIALSKGERLPPKPGRADDFRWP 381
G L+ADN ++ ++ G+EE+ TIEI+RPAI SV+ ++ R+ D+P+Q+GDT+++TL G+ VM SITP+ G+ + R A TQ PFF L KGERLPPKPGRADDFRWP
Sbjct: 321 GALKADNSKIKLKTRGNSGKEEETTIEILRPAIPASVVAIIARQQSPDRPAQLGDTISETLPGGVTVMSSITPALTAGSQAQRRRLAPTQSPFFKVLVKGERLPPKPGRADDFRWP 436
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: A0A6I0EDM3_HYPSQ (DUF459 domain-containing protein n=3 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I0EDM3_HYPSQ) HSP 1 Score: 124 bits (311), Expect = 4.080e-31 Identity = 65/126 (51.59%), Postives = 81/126 (64.29%), Query Frame = 1
Query: 7 SPGQASTAPQAGDLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITPSRGADRGQSRAALTQQPFFIALSKGERLPPKPGRADDFRWPR 384
+P ++A A D + + +V R A G E+ VT+EIVRPAI SV+ LVTR+ DK +Q+GD L D + GL VM SI P RGAD + R + TQ P+F L KGERLP KPGRADDF WPR
Sbjct: 290 APAANASADGAKDQKLETGKVDIRVLGAEGTEQIVTVEIVRPAIPASVVALVTRKQSNDKAAQMGDVLVDQIPGGLTVMSSIVPPRGADGTRRRLSPTQSPYFRVLEKGERLPSKPGRADDFTWPR 415
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: A0A537RSI9_9PROT (DUF459 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RSI9_9PROT) HSP 1 Score: 123 bits (308), Expect = 1.930e-30 Identity = 59/117 (50.43%), Postives = 84/117 (71.79%), Query Frame = 1
Query: 43 DLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITPSRGADRGQSRA-ALTQQPFFIALSKGERLPPKPGRADDFRWPRSD 390
D +ADN R++ +S AGGREE VT++I RPAI +VI L+TR++ D+PSQ+GD + D + +GL+V+ SITP+ G +R A + P++ L KGERL PKPGRADDF WP+++
Sbjct: 349 DQKADNGRITLKSIGAGGREESVTVDIPRPAIPSAVIALMTRKESSDRPSQMGDVVADDVGDGLVVLSSITPAATTGSGPARRLAPSLSPYYQVLIKGERLSPKPGRADDFSWPKAE 465
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: A0A6N6T448_9HYPH (DUF459 domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T448_9HYPH) HSP 1 Score: 122 bits (306), Expect = 2.890e-30 Identity = 60/117 (51.28%), Postives = 83/117 (70.94%), Query Frame = 1
Query: 43 DLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITPSR-GADRGQSRAALTQQPFFIALSKGERLPPKPGRADDFRWPRSD 390
+ +ADN R++ +S A GREE VT++I+RPAI +V+ LVTR++ D+PSQ+GD + + + GL+VM SITPS G G R A +Q P++ L KGER PKPGRADDF WPR++
Sbjct: 327 EQKADNSRITLKSIGANGREEAVTLDILRPAIPSAVVALVTRKESTDRPSQIGDVVPNDVGGGLVVMSSITPSTTGPGGGVRRIAPSQTPYYQVLIKGERPTPKPGRADDFSWPRAE 443
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Match: UPI0019C875A0 (DUF459 domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019C875A0) HSP 1 Score: 120 bits (302), Expect = 8.630e-30 Identity = 61/114 (53.51%), Postives = 75/114 (65.79%), Query Frame = 1
Query: 43 DLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVIQLVTRRDRGDKPSQVGDTLTDTLSNGLLVMRSITPSRGADRGQSRAALTQQPFFIALSKGERLPPKPGRADDFRWPR 384
D + + +V + A G E+ VTIEIVRPAI SV+ LVTR+ DK +Q+GD L D + GL VM SI P RG+D + R + TQ P+F L KGERLP KPGRADDF WPR
Sbjct: 306 DQKLETGKVDIKVPGAEGTEQIVTIEIVRPAIPASVVALVTRKQSDDKAAQMGDVLVDQIPGGLTVMSSIVPPRGSDGSRRRMSPTQSPYFRVLEKGERLPSKPGRADDFIWPR 419 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15564.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15564.2.1 >prot_P-wetherbeei_contig15564.2.1 ID=prot_P-wetherbeei_contig15564.2.1|Name=mRNA_P-wetherbeei_contig15564.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp APSPGQASTAPQAGDLRADNVRVSFRSAIAGGREEQVTIEIVRPAITQSVback to top mRNA from alignment at P-wetherbeei_contig15564:1060..1461- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15564.2.1 ID=mRNA_P-wetherbeei_contig15564.2.1|Name=mRNA_P-wetherbeei_contig15564.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig15564:1060..1461- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15564:1060..1461- >mRNA_P-wetherbeei_contig15564.2.1 ID=mRNA_P-wetherbeei_contig15564.2.1|Name=mRNA_P-wetherbeei_contig15564.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig15564:1060..1461- (Phaeothamnion wetherbeei SAG_119_79)back to top |