mRNA_P-wetherbeei_contig15535.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: A0A2D9JNB1_9GAMM (Ferredoxin n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9JNB1_9GAMM) HSP 1 Score: 162 bits (409), Expect = 8.330e-50 Identity = 74/104 (71.15%), Postives = 86/104 (82.69%), Query Frame = 1
Query: 1 MGTVYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPEF 312
M TVYATDRDG HT+ A G TLME+LRDA LPVEAICGGQ ICSTCHIYVD AW +L PR + EQVM ED+G+F + SRLACQVD+++SLDG+QLTLAPE+
Sbjct: 1 MATVYATDRDGAGHTIDAAPGATLMEVLRDAGLPVEAICGGQAICSTCHIYVDDAWAGKLDPRSDTEQVMCEDSGYFQENSRLACQVDFDESLDGIQLTLAPEY 104
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: A0A523P2Q2_9PROT (2Fe-2S iron-sulfur cluster binding domain-containing protein n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P2Q2_9PROT) HSP 1 Score: 138 bits (348), Expect = 1.650e-40 Identity = 60/104 (57.69%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 1 MGTVYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPEF 312
MGT+ A DR+GE H + A G+++MEILR+A L +EAICGGQCICSTCH+Y+D W A L R ++E+++VED+G + + SRL+CQ+DY D LDGL+L LAPE+
Sbjct: 1 MGTITAIDREGESHEIDAEPGLSVMEILRNAGLEIEAICGGQCICSTCHVYIDPRWQAGLPARRDSERILVEDSGAYQENSRLSCQLDYTDELDGLKLILAPEY 104
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: A0A1Z9UM83_9GAMM (Ferredoxin n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UM83_9GAMM) HSP 1 Score: 136 bits (342), Expect = 1.350e-39 Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 1
Query: 1 MGTVYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPEF 312
MGT Y TDRDG H + A+ G LMEILRD LP+E ICGG C+CSTCH+Y+ W+ + R + EQVMVED+G + DTSRLACQ+++ L+G++LTLAPEF
Sbjct: 1 MGTXYVTDRDGLEHEIAAQEGENLMEILRDGGLPIEGICGGVCVCSTCHVYMAKDWITKSGIRDDEEQVMVEDSGSYQDTSRLACQIEFTPVLEGMRLTLAPEF 104
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: A0A6I7P4T1_9PROT (Ferredoxin n=1 Tax=Geminicoccaceae bacterium TaxID=2448052 RepID=A0A6I7P4T1_9PROT) HSP 1 Score: 125 bits (315), Expect = 1.750e-35 Identity = 54/104 (51.92%), Postives = 77/104 (74.04%), Query Frame = 1
Query: 1 MGTVYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPEF 312
M + TDR+G++H + R G ++MEI+RDA+LP+EA CGG C C+TCH+YVD AW A+L P G+ E++M+++ SRL+CQ+ + D LDGLQ+TLAPEF
Sbjct: 1 MSKLIVTDREGKVHEIEGRAGWSVMEIIRDADLPIEAACGGCCACATCHVYVDEAWQAKLSPVGDEEELMLDEAFEPQPNSRLSCQLKWSDELDGLQVTLAPEF 104
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: A0A212RBT2_9PROT (Ferredoxin, 2Fe-2S n=1 Tax=Arboricoccus pini TaxID=1963835 RepID=A0A212RBT2_9PROT) HSP 1 Score: 122 bits (306), Expect = 4.100e-34 Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 1 MGTVYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPEF 312
M V TDR+G H L + G +LMEI+R+ANLP+EA CGG C C+TCH+YVDAAWV +L E +M+++ D SRL+CQV + D+LDGL++TLAPEF
Sbjct: 1 MAKVIVTDREGADHELNGQSGWSLMEIIREANLPIEAACGGCCACATCHVYVDAAWVDKLAAPESDESMMLDEAFQVQDNSRLSCQVKFTDALDGLKVTLAPEF 104
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: UPI001CA9AD40 (2Fe-2S iron-sulfur cluster-binding protein n=1 Tax=Ruegeria sp. SCSIO 43209 TaxID=2793010 RepID=UPI001CA9AD40) HSP 1 Score: 122 bits (305), Expect = 5.650e-34 Identity = 51/103 (49.51%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 1 MGTVYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPE 309
M ++ DRDG HTL AR G+ +MEI+RDA LP+EA CGG C C+TCH+YV W+ARL P+ + E +++ +TSRL+CQ++++++LDGL++ LAPE
Sbjct: 1 MSVIHVKDRDGSEHTLEARPGLKIMEIIRDAGLPIEAACGGSCACATCHVYVAPGWIARLDPQDDMEVDLLDLADAVTETSRLSCQIEFDETLDGLKVELAPE 103
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: A0A2S6SX14_9PROT (Ferredoxin CarAc n=3 Tax=root TaxID=1 RepID=A0A2S6SX14_9PROT) HSP 1 Score: 120 bits (302), Expect = 1.620e-33 Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 1 MGTVYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPE 309
MGT+ DRD +H L A G T+ME++RDA L +EA CGG C C+TCH+Y+ W+ +L PR + E+ M++ + D SRL CQ++Y + LDG++LTLAPE
Sbjct: 1 MGTIKVKDRDDNVHQLTAESGFTIMEVIRDAGLDIEAACGGCCACATCHVYIGEEWLKKLNPRDDDEESMLDQAFYVTDNSRLGCQLEYTEELDGMELTLAPE 103
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: A0A2H6AUB2_9BACT (Ferredoxin-6 n=1 Tax=bacterium HR39 TaxID=2035434 RepID=A0A2H6AUB2_9BACT) HSP 1 Score: 119 bits (298), Expect = 6.970e-33 Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 10 VYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPEF 312
VY TDR+G LH L A G TLME++R+A LP+EA CGG C C+TCH+YVD W A+L E E M+++ +TSRLACQ+ SL G+++TLAPEF
Sbjct: 5 VYVTDREGVLHELEAEPGWTLMEVIREAGLPIEAACGGCCACATCHVYVDLEWFAKLPEPSEDENAMLDEAFEVRETSRLACQIRLGPSLSGIRVTLAPEF 105
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: A8TNJ6_9PROT (Ferredoxin n=1 Tax=alpha proteobacterium BAL199 TaxID=331869 RepID=A8TNJ6_9PROT) HSP 1 Score: 119 bits (297), Expect = 9.060e-33 Identity = 55/100 (55.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 10 VYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPE 309
++ TDRDG H L A G +ME++RDA LP+ A CGG C C+TCH+YVD AWV RL+PRGE E M++ D SRL+CQV LDGL++TLAPE
Sbjct: 3 IHVTDRDGGEHELEATNGWRVMEVIRDAGLPITAECGGACACATCHVYVDPAWVDRLEPRGEEENDMLDLAFEVQDNSRLSCQVTVTPELDGLKVTLAPE 102
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Match: A0A2H6B0I4_9BACT (Ferredoxin-6 n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6B0I4_9BACT) HSP 1 Score: 118 bits (296), Expect = 1.360e-32 Identity = 53/104 (50.96%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 1 MGTVYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIYVDAAWVARLKPRGEAEQVMVEDTGHFLDTSRLACQVDYEDSLDGLQLTLAPEF 312
M VY DR+G H L + G +LMEI+R+A LP+EA CGG C C+TCH+YVDA W+ RL+ GE E M++ +TSRLACQ+ + L G+++TLAPEF
Sbjct: 1 MPKVYVVDREGVEHELEGQPGWSLMEIIREAGLPIEAACGGCCACATCHVYVDAEWLGRLEEPGEEENAMLDSAFEVRETSRLACQIRFRPELAGIRVTLAPEF 104 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15535.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15535.1.1 >prot_P-wetherbeei_contig15535.1.1 ID=prot_P-wetherbeei_contig15535.1.1|Name=mRNA_P-wetherbeei_contig15535.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=105bp MGTVYATDRDGELHTLPARRGVTLMEILRDANLPVEAICGGQCICSTCHIback to top mRNA from alignment at P-wetherbeei_contig15535:1111..1425+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15535.1.1 ID=mRNA_P-wetherbeei_contig15535.1.1|Name=mRNA_P-wetherbeei_contig15535.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig15535:1111..1425+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15535:1111..1425+ >mRNA_P-wetherbeei_contig15535.1.1 ID=mRNA_P-wetherbeei_contig15535.1.1|Name=mRNA_P-wetherbeei_contig15535.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=315bp|location=Sequence derived from alignment at P-wetherbeei_contig15535:1111..1425+ (Phaeothamnion wetherbeei SAG_119_79)back to top |